| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yegS [C]
Identifier: 161702941
GI number: 161702941
Start: 3722675
End: 3723673
Strand: Reverse
Name: yegS [C]
Synonym: gll3519
Alternate gene names: 161702941
Gene position: 3723673-3722675 (Counterclockwise)
Preceding gene: 37523089
Following gene: 37523085
Centisome position: 79.92
GC content: 69.67
Gene sequence:
>999_bases ATGCGCGAATCTGTCACTCCCGACCCCTGCAGGCGCTCAGCCTGCTTGATCTATAACCCCGTGGCCGGCCAGGGCGACGC GGAGGCCGATCTGTGGCTGATTCGCTCGTTTCTCGACCCGGTCTTTGACCTGGACATTCGCCTTACCACCCCCGAGGTCG GGGCGAACGCCCTGGCCCGGGCGGCAATGGAGCGGGGTGCGCAGTTGGTGATCGCCTCGGGGGGCGACGGTACCCTCTCG GCGGCGGCCGAGGCCCTGGTCGGAACGGGCATCCCCTTCGGGGTGATCTCGCGCGGCACGGCCAACGCCTTCGCCAACGC CCTCGGCCTGCCGCTCACCCTCGAACTGGCCTGCGAGGCGATTATCGACGGGGCGACGCGGGCAGTGGACGTGGCCACCT GCAACGGGCTGCCGATGGTGCTGCTTGCGGGTATCGGCTTCGAGGCGGAGGCGGTGGCGCGCACCAGCCGGGAGGCCAAA AACTGGTTCGGCACCCTCGCCTACGTCTGGTCGGGGTTGCAGCAGTTGGGCGAGATGCAGTCGTTTCAGGTGGCCATCGA AACGCCGGATCTGCGCATCCAAACCACCGCCACCGCCATCACGATCGCCAACGCCGCACCGCCCACCTCGGTGCTCGCCC AGGGCTGCGGCGCCTGCGTCTTCGACGACGGCCTGCTCGACATCACGGTGGTCGCCCCCAACAGCGCCATGGAAGCCCTC GCCGCCGCCTTCGACCTGTTCTCCTCGGCGGTGCGCGCCGCGGCACTCGACCGCCCCGACGTCGGTCACCTGCTCGCTCC CTGGGTGCGCGTCGTCACCGATCCGCCCCAGGCGGTGGCCATCGACGGCGAAGTGGTGGCCCGGACGCCCCTAGAAGTGG TCTGCGTGCCGGGGGGGCTCCGGGTGATCGTGCCCGTCGACGATTTGCTCGAACCGCGTCTGGCGGTGGAGTACCTAGAC CTCGAATCGGCGGCCGAAGTGGAGCTGCTCGCCGAGTAG
Upstream 100 bases:
>100_bases ACACCGTGCGTGCTTTCGGCTGTAAGTAAGATCCCGGTTGGGTGGCTTGCACGTCACAATGGGCTTGATGTCGCCGTCGG CCACAATACCCCGCCAATGT
Downstream 100 bases:
>100_bases CGTCCGGGCGCGGCCGAGCAGCCGGCGGATGGGTCCGGCCAGCCACGTCGTCTCACCATCCACACCGACCGGTTGCAATC GGCCGCGCAGCCGCTCAAAA
Product: putative lipid kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRESVTPDPCRRSACLIYNPVAGQGDAEADLWLIRSFLDPVFDLDIRLTTPEVGANALARAAMERGAQLVIASGGDGTLS AAAEALVGTGIPFGVISRGTANAFANALGLPLTLELACEAIIDGATRAVDVATCNGLPMVLLAGIGFEAEAVARTSREAK NWFGTLAYVWSGLQQLGEMQSFQVAIETPDLRIQTTATAITIANAAPPTSVLAQGCGACVFDDGLLDITVVAPNSAMEAL AAAFDLFSSAVRAAALDRPDVGHLLAPWVRVVTDPPQAVAIDGEVVARTPLEVVCVPGGLRVIVPVDDLLEPRLAVEYLD LESAAEVELLAE
Sequences:
>Translated_332_residues MRESVTPDPCRRSACLIYNPVAGQGDAEADLWLIRSFLDPVFDLDIRLTTPEVGANALARAAMERGAQLVIASGGDGTLS AAAEALVGTGIPFGVISRGTANAFANALGLPLTLELACEAIIDGATRAVDVATCNGLPMVLLAGIGFEAEAVARTSREAK NWFGTLAYVWSGLQQLGEMQSFQVAIETPDLRIQTTATAITIANAAPPTSVLAQGCGACVFDDGLLDITVVAPNSAMEAL AAAFDLFSSAVRAAALDRPDVGHLLAPWVRVVTDPPQAVAIDGEVVARTPLEVVCVPGGLRVIVPVDDLLEPRLAVEYLD LESAAEVELLAE >Mature_332_residues MRESVTPDPCRRSACLIYNPVAGQGDAEADLWLIRSFLDPVFDLDIRLTTPEVGANALARAAMERGAQLVIASGGDGTLS AAAEALVGTGIPFGVISRGTANAFANALGLPLTLELACEAIIDGATRAVDVATCNGLPMVLLAGIGFEAEAVARTSREAK NWFGTLAYVWSGLQQLGEMQSFQVAIETPDLRIQTTATAITIANAAPPTSVLAQGCGACVFDDGLLDITVVAPNSAMEAL AAAFDLFSSAVRAAALDRPDVGHLLAPWVRVVTDPPQAVAIDGEVVARTPLEVVCVPGGLRVIVPVDDLLEPRLAVEYLD LESAAEVELLAE
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=269, Percent_Identity=26.0223048327138, Blast_Score=85, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 34516; Mature: 34516
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESVTPDPCRRSACLIYNPVAGQGDAEADLWLIRSFLDPVFDLDIRLTTPEVGANALAR CCCCCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHH AAMERGAQLVIASGGDGTLSAAAEALVGTGIPFGVISRGTANAFANALGLPLTLELACEA HHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCEEHHHHHHH IIDGATRAVDVATCNGLPMVLLAGIGFEAEAVARTSREAKNWFGTLAYVWSGLQQLGEMQ HHCCCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SFQVAIETPDLRIQTTATAITIANAAPPTSVLAQGCGACVFDDGLLDITVVAPNSAMEAL EEEEEEECCCEEEEEEEEEEEEECCCCCHHHHHHCCCCEEEECCCEEEEEECCCHHHHHH AAAFDLFSSAVRAAALDRPDVGHLLAPWVRVVTDPPQAVAIDGEVVARTPLEVVCVPGGL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEEECCEEEEEECCCC RVIVPVDDLLEPRLAVEYLDLESAAEVELLAE EEEEECHHHHCCHHHEEEECCCCCCCEEEECC >Mature Secondary Structure MRESVTPDPCRRSACLIYNPVAGQGDAEADLWLIRSFLDPVFDLDIRLTTPEVGANALAR CCCCCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHH AAMERGAQLVIASGGDGTLSAAAEALVGTGIPFGVISRGTANAFANALGLPLTLELACEA HHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCEEHHHHHHH IIDGATRAVDVATCNGLPMVLLAGIGFEAEAVARTSREAKNWFGTLAYVWSGLQQLGEMQ HHCCCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SFQVAIETPDLRIQTTATAITIANAAPPTSVLAQGCGACVFDDGLLDITVVAPNSAMEAL EEEEEEECCCEEEEEEEEEEEEECCCCCHHHHHHCCCCEEEECCCEEEEEECCCHHHHHH AAAFDLFSSAVRAAALDRPDVGHLLAPWVRVVTDPPQAVAIDGEVVARTPLEVVCVPGGL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEEECCEEEEEECCCC RVIVPVDDLLEPRLAVEYLDLESAAEVELLAE EEEEECHHHHCCHHHEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]