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The map label for this gene is osmF [H]

Identifier: 34499847

GI number: 34499847

Start: 4735907

End: 4736824

Strand: Direct

Name: osmF [H]

Synonym: CV_4392

Alternate gene names: 34499847

Gene position: 4735907-4736824 (Clockwise)

Preceding gene: 34499846

Following gene: 34499848

Centisome position: 99.68

GC content: 70.26

Gene sequence:

>918_bases
ATGTCAAACCGCATGTCCCGCATCGCCGCGCTGCTGGCCGGCATCCTGACGGCCGCCACGGCCTGCGCCGCCGACGCCGT
CCGCGTCGGCTCCAAGATTGACACCGAGGGCGCGCTGCTGGGCAACCTCATCCAGCAGGTGCTGGAGGCCCATGGCGTGA
AGACCGAAGGCAGGCTGTCGCTGGGCAATACCAAGGTGGTGCGCACCGCCATCGCCGCCGGCGAGATCGACATCTATCCC
GAATACACCGGCAACGGCGCCTTCTTCTTCTCCGACGAAAAGAACCCGGCGTGGAAATCGGCCGCCGCCGGCTACCAGCG
CGTCAAGCAGCTGGACTACGACAAGAACCGCATCGTCTGGCTCGCGCCCGCGCCGGCCAACAACACCTGGACCATCGCCG
TGCGCCGCGACGTGGCCGACGCCAACCGCCTGCGCACGCTGGCCGATCTGGGCGCCTGGCTGGGCCGCGGCGGCCGCTTC
AAGCTGGCGGCCTCGGCCGAGTTCATCGAACGGCCGGACGCTCTGCCGGCCTTCCAGAACGCCTACGGCTTCAAGCTGCG
CCAGGACCAGTTGCTGGCGCTGGCCGGCGGCGACACCTCGGCCACCGTCAAGGCGGCCGCGGAACAGACCTCCGGCGTCA
ACGCGGCGATGGCCTACGGCACCGACGGCCCGGTGGCCGCGCTGGGCCTGGTCGCGCTGGCCGATCCCAAGGGCGTGCAG
CCGGTGTACGCGCCGACGCCCATCATCCGCGCCGACGCGCTGGCCCGCCATCCGGACATCGCCGTCTGGCTCAAGCCGGT
GTTCCAGTCGCTGGACGCCGCCACGCTGCAGAAACTCAACGCCAGCATCGCGCTGGAAGGCCGCAACGCGCGCCAGGTGG
CCGCCGGCTATCTGAAGCGCAAGGGCTTCATCCAGTGA

Upstream 100 bases:

>100_bases
CCCTCAGAAACTGGCCGCAAGCGCGCAATGGGCGGTATAGTGAACGCCATCGTCATCCTGCGCGGCTGCGAGCGCGGCCG
GTCCGCCACGGGGAGGAACC

Downstream 100 bases:

>100_bases
CCTTGGGGCCGTTCGCCTGATGCGGCTGCGCAACCGGATGCAGCTGGTCCTGGCGCTGCTGTTGCTGGCGGGCTTTTGCA
GCCCGCTGCTCAGCCACGCG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSNRMSRIAALLAGILTAATACAADAVRVGSKIDTEGALLGNLIQQVLEAHGVKTEGRLSLGNTKVVRTAIAAGEIDIYP
EYTGNGAFFFSDEKNPAWKSAAAGYQRVKQLDYDKNRIVWLAPAPANNTWTIAVRRDVADANRLRTLADLGAWLGRGGRF
KLAASAEFIERPDALPAFQNAYGFKLRQDQLLALAGGDTSATVKAAAEQTSGVNAAMAYGTDGPVAALGLVALADPKGVQ
PVYAPTPIIRADALARHPDIAVWLKPVFQSLDAATLQKLNASIALEGRNARQVAAGYLKRKGFIQ

Sequences:

>Translated_305_residues
MSNRMSRIAALLAGILTAATACAADAVRVGSKIDTEGALLGNLIQQVLEAHGVKTEGRLSLGNTKVVRTAIAAGEIDIYP
EYTGNGAFFFSDEKNPAWKSAAAGYQRVKQLDYDKNRIVWLAPAPANNTWTIAVRRDVADANRLRTLADLGAWLGRGGRF
KLAASAEFIERPDALPAFQNAYGFKLRQDQLLALAGGDTSATVKAAAEQTSGVNAAMAYGTDGPVAALGLVALADPKGVQ
PVYAPTPIIRADALARHPDIAVWLKPVFQSLDAATLQKLNASIALEGRNARQVAAGYLKRKGFIQ
>Mature_304_residues
SNRMSRIAALLAGILTAATACAADAVRVGSKIDTEGALLGNLIQQVLEAHGVKTEGRLSLGNTKVVRTAIAAGEIDIYPE
YTGNGAFFFSDEKNPAWKSAAAGYQRVKQLDYDKNRIVWLAPAPANNTWTIAVRRDVADANRLRTLADLGAWLGRGGRFK
LAASAEFIERPDALPAFQNAYGFKLRQDQLLALAGGDTSATVKAAAEQTSGVNAAMAYGTDGPVAALGLVALADPKGVQP
VYAPTPIIRADALARHPDIAVWLKPVFQSLDAATLQKLNASIALEGRNARQVAAGYLKRKGFIQ

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=283, Percent_Identity=69.2579505300353, Blast_Score=413, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32326; Mature: 32195

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRMSRIAALLAGILTAATACAADAVRVGSKIDTEGALLGNLIQQVLEAHGVKTEGRLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
LGNTKVVRTAIAAGEIDIYPEYTGNGAFFFSDEKNPAWKSAAAGYQRVKQLDYDKNRIVW
CCCHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEE
LAPAPANNTWTIAVRRDVADANRLRTLADLGAWLGRGGRFKLAASAEFIERPDALPAFQN
EEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCHHHH
AYGFKLRQDQLLALAGGDTSATVKAAAEQTSGVNAAMAYGTDGPVAALGLVALADPKGVQ
CCCCEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEECCCCCCC
PVYAPTPIIRADALARHPDIAVWLKPVFQSLDAATLQKLNASIALEGRNARQVAAGYLKR
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
KGFIQ
CCCCC
>Mature Secondary Structure 
SNRMSRIAALLAGILTAATACAADAVRVGSKIDTEGALLGNLIQQVLEAHGVKTEGRLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
LGNTKVVRTAIAAGEIDIYPEYTGNGAFFFSDEKNPAWKSAAAGYQRVKQLDYDKNRIVW
CCCHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEE
LAPAPANNTWTIAVRRDVADANRLRTLADLGAWLGRGGRFKLAASAEFIERPDALPAFQN
EEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCHHHH
AYGFKLRQDQLLALAGGDTSATVKAAAEQTSGVNAAMAYGTDGPVAALGLVALADPKGVQ
CCCCEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEECCCCCCC
PVYAPTPIIRADALARHPDIAVWLKPVFQSLDAATLQKLNASIALEGRNARQVAAGYLKR
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
KGFIQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]