| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499735
Identifier: 34499735
GI number: 34499735
Start: 4614534
End: 4615061
Strand: Reverse
Name: 34499735
Synonym: CV_4280
Alternate gene names: NA
Gene position: 4615061-4614534 (Counterclockwise)
Preceding gene: 34499736
Following gene: 34499733
Centisome position: 97.14
GC content: 68.37
Gene sequence:
>528_bases ATGTCTCGCACGCTTTACCCTTTTTACAGCAGCGATATCTCCGCGCTGGCCCGCTCCTTGAAACAGCAATGGGCGGAGCA GTCCGAAGCGCCCGGCCATCTGCAGATCCTCAACATGCTGGCGCGCGCCGCCGGCTTCCAGAATTTCCAGCACTTGCGCG CCGAGCACGACCGCCCGGCGCCGGCCGAGCCGCAAACCGTGTCGAATGAAGCCCGCCGCCTGCTGCGTCATTTCGACGAC GAAGGCCGGCTCGCGCGCTGGCCGAAGAAGTTCAGCGAGCAGCGCGCCTGCCTGTGGGCGCTGTGGGCCGGCCTGCCGCG CGGCGAGGAGTGGGACGAGCCGGCGGCCAACGCCGCCATCCGCGCGCTGGAGGCCTTCGGCGACCACGTGCTGATCCGGC GCGAGCTGGTGGAGGGCGGTTGGATAGGCCGCACCGACGATTGCCGCCGGTATTGGCTGATTGAGAGGGCAGTGCCGGAG GAAATGTCGGAACTGGCGGAGAAGGTCCGCTTGCGGCGCGCCGGGTAA
Upstream 100 bases:
>100_bases CAGCATCATCCACTCCACGCTTGGCTCGAACCCCGTGCCAGGCCGCAACGGCGACCGCGGCAGTCCCTCCCGACCTTGGC ACGCAGACAGGATTCGAACC
Downstream 100 bases:
>100_bases GCCGCGTGAGGGAGGGGGGAAGAGCCGGCCCCTCCCTTTTCGCGAGGGGGAAGGGCCGCGGGAGAAGCGATTACAGGTAG GGTTTGACCGCCGCTTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSRTLYPFYSSDISALARSLKQQWAEQSEAPGHLQILNMLARAAGFQNFQHLRAEHDRPAPAEPQTVSNEARRLLRHFDD EGRLARWPKKFSEQRACLWALWAGLPRGEEWDEPAANAAIRALEAFGDHVLIRRELVEGGWIGRTDDCRRYWLIERAVPE EMSELAEKVRLRRAG
Sequences:
>Translated_175_residues MSRTLYPFYSSDISALARSLKQQWAEQSEAPGHLQILNMLARAAGFQNFQHLRAEHDRPAPAEPQTVSNEARRLLRHFDD EGRLARWPKKFSEQRACLWALWAGLPRGEEWDEPAANAAIRALEAFGDHVLIRRELVEGGWIGRTDDCRRYWLIERAVPE EMSELAEKVRLRRAG >Mature_174_residues SRTLYPFYSSDISALARSLKQQWAEQSEAPGHLQILNMLARAAGFQNFQHLRAEHDRPAPAEPQTVSNEARRLLRHFDDE GRLARWPKKFSEQRACLWALWAGLPRGEEWDEPAANAAIRALEAFGDHVLIRRELVEGGWIGRTDDCRRYWLIERAVPEE MSELAEKVRLRRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20217; Mature: 20086
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTLYPFYSSDISALARSLKQQWAEQSEAPGHLQILNMLARAAGFQNFQHLRAEHDRPA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAEPQTVSNEARRLLRHFDDEGRLARWPKKFSEQRACLWALWAGLPRGEEWDEPAANAAI CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RALEAFGDHVLIRRELVEGGWIGRTDDCRRYWLIERAVPEEMSELAEKVRLRRAG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRTLYPFYSSDISALARSLKQQWAEQSEAPGHLQILNMLARAAGFQNFQHLRAEHDRPA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAEPQTVSNEARRLLRHFDDEGRLARWPKKFSEQRACLWALWAGLPRGEEWDEPAANAAI CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RALEAFGDHVLIRRELVEGGWIGRTDDCRRYWLIERAVPEEMSELAEKVRLRRAG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA