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The map label for this gene is dps [C]

Identifier: 34499708

GI number: 34499708

Start: 4588513

End: 4588980

Strand: Direct

Name: dps [C]

Synonym: CV_4253

Alternate gene names: 34499708

Gene position: 4588513-4588980 (Clockwise)

Preceding gene: 34499707

Following gene: 34499709

Centisome position: 96.58

GC content: 65.38

Gene sequence:

>468_bases
ATGGATATCGGCATCAACGAACAAGATCGCCAGGAAATCGCCCACGGCCTGTCCCGCCTGCTGGCAGACAGCTACACCCT
GTACCTGAAGACGCACAACTTCCACTGGAACGTCACCGGGCCGATGTTCAACACCCTGCACCTGATGTTCGAGACCCAGT
ACAACGAACTGGCGCTGGCGGTGGACGCCGTCGCCGAGCGCATCCGCGCGCTCGGCCACTACGCGCCGGGCAGCTACGCC
GACTACGCCAAGCTGACCGCCATTCCGGAAGCCGCCGGCACGCCGCCGAAGGCCGAGGACATGATCCGCCAGCTGGTGGA
CGGCCACGAAACCGTCTGCCGCACCGCCCGCAGCGTGTTCGCCGTGGTGGAGCGCGCCTCCGACGAGCCCAGCGCCGATC
TGCTGACCCAGCGCCTGCAAGTGCACGAGAAAACCGCCTGGATGCTGCGCAGCCTGCTGGAAAAATAA

Upstream 100 bases:

>100_bases
ATGGCACGACAACCAAGGTTTCATCCCATTTCCCGCTCAAAACGGGAAGTGTAGTCCAAAACGCGGCCTGGAAGCAGCGC
CGCCAAAAAGGAGCATCGTC

Downstream 100 bases:

>100_bases
GCCGGCCGCGCGCCGCCGCCGAAACGCCGCCTCCGCGCGGCGTTTTTGCATGGCCGCGTGCTACACTCTGGCAAAATCCG
GAACCCGCGATGGCCGACCA

Product: DNA-binding stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDIGINEQDRQEIAHGLSRLLADSYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALAVDAVAERIRALGHYAPGSYA
DYAKLTAIPEAAGTPPKAEDMIRQLVDGHETVCRTARSVFAVVERASDEPSADLLTQRLQVHEKTAWMLRSLLEK

Sequences:

>Translated_155_residues
MDIGINEQDRQEIAHGLSRLLADSYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALAVDAVAERIRALGHYAPGSYA
DYAKLTAIPEAAGTPPKAEDMIRQLVDGHETVCRTARSVFAVVERASDEPSADLLTQRLQVHEKTAWMLRSLLEK
>Mature_155_residues
MDIGINEQDRQEIAHGLSRLLADSYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALAVDAVAERIRALGHYAPGSYA
DYAKLTAIPEAAGTPPKAEDMIRQLVDGHETVCRTARSVFAVVERASDEPSADLLTQRLQVHEKTAWMLRSLLEK

Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 17467; Mature: 17467

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGINEQDRQEIAHGLSRLLADSYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALA
CCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCEEEEECCHHHHHHHHHHHCCHHHHHHH
VDAVAERIRALGHYAPGSYADYAKLTAIPEAAGTPPKAEDMIRQLVDGHETVCRTARSVF
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
AVVERASDEPSADLLTQRLQVHEKTAWMLRSLLEK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIGINEQDRQEIAHGLSRLLADSYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALA
CCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCEEEEECCHHHHHHHHHHHCCHHHHHHH
VDAVAERIRALGHYAPGSYADYAKLTAIPEAAGTPPKAEDMIRQLVDGHETVCRTARSVF
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
AVVERASDEPSADLLTQRLQVHEKTAWMLRSLLEK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]