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The map label for this gene is chiC [H]

Identifier: 34499695

GI number: 34499695

Start: 4576570

End: 4578192

Strand: Reverse

Name: chiC [H]

Synonym: CV_4240

Alternate gene names: 34499695

Gene position: 4578192-4576570 (Counterclockwise)

Preceding gene: 34499696

Following gene: 34499689

Centisome position: 96.36

GC content: 67.22

Gene sequence:

>1623_bases
ATGATGCATTTCCCGTTGTCGCGCGCGCTGCTGGCAGTCGGCGCCGCCTTCGCGCTGTCCCAGGCGGTTTGGGCCGCGCC
GTCTTGCTCGCCGTGGGCCAGCGGCAAGGTTTATAACGCCGGCGATTACGCCACCTTCAACGGCAAGACTTGGCGCGCCA
GCTGGTGGACCCAGGGCGAGCAGCCCGGCAGCAGCCAATGGGGCGCCTGGCAGGAGCGTCCGGCCAGCGAGTGCGTGCCA
GACAACGGCGACCCGGGCACCCCGGGCAATCCCGGCAGCGGTGTGCCGCCCGAGCCCAAGCCCACCGTCGGCCGCCATGT
CGGCTCCTACTTCGCCCAGTGGGGCATCTACGACCGCAACTACAAGGTCTTCAACCTGGTGAAGTCCGGCGGCGACAAGC
AACTGACCTTCCTCAACTACGCGTTCGGCAACGTCTACGCCGACGGCAAGTGCGGCATGGTCACCCGCGCCGAGAACGGC
AACGGCGATGGCGGCGACGCCTGGGCCGACTACCAGCGTTCCTTCGCCGCCAACGAGTCGGTGGACGGCAAGGCCGACAG
CTGGAACGATCCGCTGCGCGGCAACTTCAATCAGCTGCGCAAGCTGAAGCTGGCCAACCCGCAACTGAAGGTGCTGATCT
CGCTGGGCGGCTGGACCTGGTCGAAGAACTTCGGCAAGTTCGCCGCCACCGACGCCGGCCGCAAGGCGATGGTCAGCTCG
TGCATCGACCTCTACATCAAGGGCAATCTGCCGGTGGGCGAGAACGCCGGCGGACAGGCGGCGGCGCTCGGCGTGTTCGA
CGGCTTCGACATCGATTGGGAATACCCGGGCGGCGGCGGGCTGCCGACCAATACCGTCGATCCCAACGACAAGCAGAACT
ACACGCTGCTGATGGCCGAGTTCCGCAACCAGCTGAACGCGCTGTCCACGGCCAACAAGCGCCGCTACTACCTGACCGCC
GCCATCGGCTCAGGCGTCGACAAGATCCGCAACACCGAGCCGGCCGCCTACAGCAGCTATCTCGACTGGATCAACGTGAT
GACCTACGACTTCCACGGCGGCTGGGACGCCAAGGGGCCGACCAACTTCCAGTCCAATCTCTACCGCGATCCGGCCGCGC
CGGTGACTGGCGACCAGGTCTACTACACAGTCGACGACGCGGTGAAAACCCTGGTGAACGCCGGCGTGCCGCGCGCCAAG
ATCAACGTCGGCCTGCCGTTCTACGGCCGCGGCTGGGCGGGCGTCGCCGCCGGTCCGAAGGGGGACGGCTTGTACCAGGT
GGCCACCGGCCCGGCCAAGGGCACCTACGAGCAGGGCATCGAGGATTACCGCATCCTGGTGAAGCGCAGCGCCAAGCAGT
TCAACAGCCCGGTGGCCAAGCAGCTGTGGACCTACGACGGCAACGAGTTCTGGAGCTACGACGACCCCGCCACCATCCGC
GGCAAGCTCGATTACGTGCGCTCGCAGCAGCTGGGCGGCGTGTTCAGCTGGTCGCTGGATGGCGACGACGCGCAGTCCAC
CTTGCTGAAGACCAGCGCCGAGGTGAGGCTGGACGCGGCGACGGCCGCCCAGCGCCGCGCGGCAGCCGCTGCCGCGGCCA
AAGCCAAAGCGGCCAAGAAGTAA

Upstream 100 bases:

>100_bases
CTGATACCAATGTAATACCACATGAGACGCTCATGTCGGTGTGCGCATTGGCAGGAGCGAATCCCTCCGCCGTTCACTCA
TCAAGAAGAGGAGAACCACC

Downstream 100 bases:

>100_bases
GCGTGCGAGGACGGAAAAACGGCGGGGATTCCCCGCCGTTTTTCATGGCTGGAACGGATTTACAGTTCCGCCGCCGGCAG
CACTCGCAACGGCTGAGGCG

Product: chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MMHFPLSRALLAVGAAFALSQAVWAAPSCSPWASGKVYNAGDYATFNGKTWRASWWTQGEQPGSSQWGAWQERPASECVP
DNGDPGTPGNPGSGVPPEPKPTVGRHVGSYFAQWGIYDRNYKVFNLVKSGGDKQLTFLNYAFGNVYADGKCGMVTRAENG
NGDGGDAWADYQRSFAANESVDGKADSWNDPLRGNFNQLRKLKLANPQLKVLISLGGWTWSKNFGKFAATDAGRKAMVSS
CIDLYIKGNLPVGENAGGQAAALGVFDGFDIDWEYPGGGGLPTNTVDPNDKQNYTLLMAEFRNQLNALSTANKRRYYLTA
AIGSGVDKIRNTEPAAYSSYLDWINVMTYDFHGGWDAKGPTNFQSNLYRDPAAPVTGDQVYYTVDDAVKTLVNAGVPRAK
INVGLPFYGRGWAGVAAGPKGDGLYQVATGPAKGTYEQGIEDYRILVKRSAKQFNSPVAKQLWTYDGNEFWSYDDPATIR
GKLDYVRSQQLGGVFSWSLDGDDAQSTLLKTSAEVRLDAATAAQRRAAAAAAAKAKAAKK

Sequences:

>Translated_540_residues
MMHFPLSRALLAVGAAFALSQAVWAAPSCSPWASGKVYNAGDYATFNGKTWRASWWTQGEQPGSSQWGAWQERPASECVP
DNGDPGTPGNPGSGVPPEPKPTVGRHVGSYFAQWGIYDRNYKVFNLVKSGGDKQLTFLNYAFGNVYADGKCGMVTRAENG
NGDGGDAWADYQRSFAANESVDGKADSWNDPLRGNFNQLRKLKLANPQLKVLISLGGWTWSKNFGKFAATDAGRKAMVSS
CIDLYIKGNLPVGENAGGQAAALGVFDGFDIDWEYPGGGGLPTNTVDPNDKQNYTLLMAEFRNQLNALSTANKRRYYLTA
AIGSGVDKIRNTEPAAYSSYLDWINVMTYDFHGGWDAKGPTNFQSNLYRDPAAPVTGDQVYYTVDDAVKTLVNAGVPRAK
INVGLPFYGRGWAGVAAGPKGDGLYQVATGPAKGTYEQGIEDYRILVKRSAKQFNSPVAKQLWTYDGNEFWSYDDPATIR
GKLDYVRSQQLGGVFSWSLDGDDAQSTLLKTSAEVRLDAATAAQRRAAAAAAAKAKAAKK
>Mature_540_residues
MMHFPLSRALLAVGAAFALSQAVWAAPSCSPWASGKVYNAGDYATFNGKTWRASWWTQGEQPGSSQWGAWQERPASECVP
DNGDPGTPGNPGSGVPPEPKPTVGRHVGSYFAQWGIYDRNYKVFNLVKSGGDKQLTFLNYAFGNVYADGKCGMVTRAENG
NGDGGDAWADYQRSFAANESVDGKADSWNDPLRGNFNQLRKLKLANPQLKVLISLGGWTWSKNFGKFAATDAGRKAMVSS
CIDLYIKGNLPVGENAGGQAAALGVFDGFDIDWEYPGGGGLPTNTVDPNDKQNYTLLMAEFRNQLNALSTANKRRYYLTA
AIGSGVDKIRNTEPAAYSSYLDWINVMTYDFHGGWDAKGPTNFQSNLYRDPAAPVTGDQVYYTVDDAVKTLVNAGVPRAK
INVGLPFYGRGWAGVAAGPKGDGLYQVATGPAKGTYEQGIEDYRILVKRSAKQFNSPVAKQLWTYDGNEFWSYDDPATIR
GKLDYVRSQQLGGVFSWSLDGDDAQSTLLKTSAEVRLDAATAAQRRAAAAAAAKAKAAKK

Specific function: Unknown

COG id: COG3325

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

Organism=Homo sapiens, GI144226251, Length=333, Percent_Identity=30.6306306306306, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI133893286, Length=372, Percent_Identity=30.3763440860215, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI4502809, Length=344, Percent_Identity=29.9418604651163, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI42542398, Length=278, Percent_Identity=32.7338129496403, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI68533255, Length=324, Percent_Identity=27.1604938271605, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI68533260, Length=324, Percent_Identity=27.1604938271605, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI68533253, Length=324, Percent_Identity=27.1604938271605, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI58386720, Length=324, Percent_Identity=27.7777777777778, Blast_Score=100, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71995504, Length=348, Percent_Identity=29.0229885057471, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17551250, Length=326, Percent_Identity=30.3680981595092, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17559362, Length=418, Percent_Identity=26.0765550239234, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17563680, Length=448, Percent_Identity=26.3392857142857, Blast_Score=111, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17535565, Length=320, Percent_Identity=24.6875, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531695, Length=328, Percent_Identity=24.390243902439, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17531689, Length=334, Percent_Identity=23.3532934131737, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17531683, Length=315, Percent_Identity=23.1746031746032, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17531697, Length=323, Percent_Identity=23.5294117647059, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17535577, Length=332, Percent_Identity=25.9036144578313, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17535579, Length=347, Percent_Identity=23.6311239193084, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17535575, Length=347, Percent_Identity=23.6311239193084, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320579, Length=451, Percent_Identity=25.2771618625277, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI221330815, Length=334, Percent_Identity=31.437125748503, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI45550474, Length=336, Percent_Identity=30.952380952381, Blast_Score=135, Evalue=1e-31,
Organism=Drosophila melanogaster, GI221329807, Length=338, Percent_Identity=28.1065088757396, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI161077700, Length=342, Percent_Identity=28.6549707602339, Blast_Score=122, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24655584, Length=358, Percent_Identity=28.4916201117318, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI116007452, Length=440, Percent_Identity=26.5909090909091, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI22024049, Length=334, Percent_Identity=27.2455089820359, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21358195, Length=329, Percent_Identity=26.7477203647416, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28573679, Length=322, Percent_Identity=27.639751552795, Blast_Score=83, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR012291
- InterPro:   IPR018366
- InterPro:   IPR001919
- InterPro:   IPR011583
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00553 CBM_2; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 58345; Mature: 58345

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHFPLSRALLAVGAAFALSQAVWAAPSCSPWASGKVYNAGDYATFNGKTWRASWWTQGE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCEEEEECCCCCC
QPGSSQWGAWQERPASECVPDNGDPGTPGNPGSGVPPEPKPTVGRHVGSYFAQWGIYDRN
CCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
YKVFNLVKSGGDKQLTFLNYAFGNVYADGKCGMVTRAENGNGDGGDAWADYQRSFAANES
CEEEEEECCCCCCEEEEEEEECCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCC
VDGKADSWNDPLRGNFNQLRKLKLANPQLKVLISLGGWTWSKNFGKFAATDAGRKAMVSS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCEECCCCHHHHHHHH
CIDLYIKGNLPVGENAGGQAAALGVFDGFDIDWEYPGGGGLPTNTVDPNDKQNYTLLMAE
HHEEEEECCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEHHH
FRNQLNALSTANKRRYYLTAAIGSGVDKIRNTEPAAYSSYLDWINVMTYDFHGGWDAKGP
HHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCCC
TNFQSNLYRDPAAPVTGDQVYYTVDDAVKTLVNAGVPRAKINVGLPFYGRGWAGVAAGPK
CCHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
GDGLYQVATGPAKGTYEQGIEDYRILVKRSAKQFNSPVAKQLWTYDGNEFWSYDDPATIR
CCCEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCEEE
GKLDYVRSQQLGGVFSWSLDGDDAQSTLLKTSAEVRLDAATAAQRRAAAAAAAKAKAAKK
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMHFPLSRALLAVGAAFALSQAVWAAPSCSPWASGKVYNAGDYATFNGKTWRASWWTQGE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCEEEEECCCCCC
QPGSSQWGAWQERPASECVPDNGDPGTPGNPGSGVPPEPKPTVGRHVGSYFAQWGIYDRN
CCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
YKVFNLVKSGGDKQLTFLNYAFGNVYADGKCGMVTRAENGNGDGGDAWADYQRSFAANES
CEEEEEECCCCCCEEEEEEEECCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCC
VDGKADSWNDPLRGNFNQLRKLKLANPQLKVLISLGGWTWSKNFGKFAATDAGRKAMVSS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCEECCCCHHHHHHHH
CIDLYIKGNLPVGENAGGQAAALGVFDGFDIDWEYPGGGGLPTNTVDPNDKQNYTLLMAE
HHEEEEECCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEHHH
FRNQLNALSTANKRRYYLTAAIGSGVDKIRNTEPAAYSSYLDWINVMTYDFHGGWDAKGP
HHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCCC
TNFQSNLYRDPAAPVTGDQVYYTVDDAVKTLVNAGVPRAKINVGLPFYGRGWAGVAAGPK
CCHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
GDGLYQVATGPAKGTYEQGIEDYRILVKRSAKQFNSPVAKQLWTYDGNEFWSYDDPATIR
CCCEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCCEEE
GKLDYVRSQQLGGVFSWSLDGDDAQSTLLKTSAEVRLDAATAAQRRAAAAAAAKAKAAKK
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8515228 [H]