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The map label for this gene is ybbI [C]

Identifier: 34499691

GI number: 34499691

Start: 4573202

End: 4573996

Strand: Direct

Name: ybbI [C]

Synonym: CV_4236

Alternate gene names: 34499691

Gene position: 4573202-4573996 (Clockwise)

Preceding gene: 34499690

Following gene: 34499692

Centisome position: 96.26

GC content: 71.45

Gene sequence:

>795_bases
ATGCTCACCATCGGACAACTGGCCCGCTGCCACGGCCTCAGCACCAAGACGCTGCGCCACTACGACAGCATCGGCCTGTT
CCGCCCGGCGCTGACCGGCCGCGACAACGGCTACCGCTACTACCTGCCGGCGCAGGTGGCGGAGCTGGGGCGCATCGTCA
TGCTGCGCGAGCTGGGCCTGCCGCTGGACGAGATCGCCAAGCTGCTGCCCGCCGACGAGGCGGCGCTGCGCCGCGCGCTG
CGCGAACATGCGGCGCGGCTGCGGGATGAGATCGAAGCGCGGCGCGAGCGGATCGCGCGCATCGAGCGCCGCCTCGACCA
AACCGAATGGAGCCAGACCATGATTCAGACACCCGATATCGTCGCCCTGCCCGCCTTCCGCGTGGTCGGCCTCGCCTGGA
GTCCCCAGGACGAGGGCGACATCCCGGCCATGTGGCAACGCTTCCTCGAACGCGAGCATGAAATCGCCGACGCCCGTCCC
GGCAGCAGCTACGGCCTGTGCCAGCCGCTGCCGGACGGCGGCTGGCGCTACCTGGCCGCGCTGCAAACCGCGCCGGACGC
GCCGGTGCCGGACGGCATGGCCGCCGTGGACGTGCCGGCGCAGCGCTACGCCCGCTTCCACCACGTCGGCCCGGTGAGCG
GACTGCCCGCCACCTTCCAGGCGATACACGGCAGCTGGCTGCCCGCGGCCGGCCTGGCGGCGGTGGAGGGCATCGAGTTC
GAGTACATGGACGCGCGCTTCCTCGCGCCCGATCATCCCGACTCGCTGACCGAGCTGTACATCCCGATACGCTGA

Upstream 100 bases:

>100_bases
GACGGCGGCATCGAACGGGTATTGCTGTAACGGCCGGTCTTGACCTTGCCCTTGCGGCAAGGTCCACACTGCCTCCATCC
GCCACCACGCATTTCGACCC

Downstream 100 bases:

>100_bases
GCCCCGCCGCGCGGCCCCCGCCCGGATGCGTGCCCGGGCCGCGACCCATTCATTCCTGTTCACAGCTGACGTAGACGCTC
GAAACGCCTATCTTCATATT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; MerR Family Transcriptional Regulator; Transcriptional Regulator MerR Family; Transcriptional Regulator AraC Family; Transcriptional Regulator Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLTIGQLARCHGLSTKTLRHYDSIGLFRPALTGRDNGYRYYLPAQVAELGRIVMLRELGLPLDEIAKLLPADEAALRRAL
REHAARLRDEIEARRERIARIERRLDQTEWSQTMIQTPDIVALPAFRVVGLAWSPQDEGDIPAMWQRFLEREHEIADARP
GSSYGLCQPLPDGGWRYLAALQTAPDAPVPDGMAAVDVPAQRYARFHHVGPVSGLPATFQAIHGSWLPAAGLAAVEGIEF
EYMDARFLAPDHPDSLTELYIPIR

Sequences:

>Translated_264_residues
MLTIGQLARCHGLSTKTLRHYDSIGLFRPALTGRDNGYRYYLPAQVAELGRIVMLRELGLPLDEIAKLLPADEAALRRAL
REHAARLRDEIEARRERIARIERRLDQTEWSQTMIQTPDIVALPAFRVVGLAWSPQDEGDIPAMWQRFLEREHEIADARP
GSSYGLCQPLPDGGWRYLAALQTAPDAPVPDGMAAVDVPAQRYARFHHVGPVSGLPATFQAIHGSWLPAAGLAAVEGIEF
EYMDARFLAPDHPDSLTELYIPIR
>Mature_264_residues
MLTIGQLARCHGLSTKTLRHYDSIGLFRPALTGRDNGYRYYLPAQVAELGRIVMLRELGLPLDEIAKLLPADEAALRRAL
REHAARLRDEIEARRERIARIERRLDQTEWSQTMIQTPDIVALPAFRVVGLAWSPQDEGDIPAMWQRFLEREHEIADARP
GSSYGLCQPLPDGGWRYLAALQTAPDAPVPDGMAAVDVPAQRYARFHHVGPVSGLPATFQAIHGSWLPAAGLAAVEGIEF
EYMDARFLAPDHPDSLTELYIPIR

Specific function: Copper responsive transcription regulator [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29518; Mature: 29518

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIGQLARCHGLSTKTLRHYDSIGLFRPALTGRDNGYRYYLPAQVAELGRIVMLRELGL
CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCC
PLDEIAKLLPADEAALRRALREHAARLRDEIEARRERIARIERRLDQTEWSQTMIQTPDI
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VALPAFRVVGLAWSPQDEGDIPAMWQRFLEREHEIADARPGSSYGLCQPLPDGGWRYLAA
EEECHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
LQTAPDAPVPDGMAAVDVPAQRYARFHHVGPVSGLPATFQAIHGSWLPAAGLAAVEGIEF
HHCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCE
EYMDARFLAPDHPDSLTELYIPIR
EEECCEECCCCCCCCHHEEEECCC
>Mature Secondary Structure
MLTIGQLARCHGLSTKTLRHYDSIGLFRPALTGRDNGYRYYLPAQVAELGRIVMLRELGL
CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCC
PLDEIAKLLPADEAALRRALREHAARLRDEIEARRERIARIERRLDQTEWSQTMIQTPDI
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VALPAFRVVGLAWSPQDEGDIPAMWQRFLEREHEIADARPGSSYGLCQPLPDGGWRYLAA
EEECHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
LQTAPDAPVPDGMAAVDVPAQRYARFHHVGPVSGLPATFQAIHGSWLPAAGLAAVEGIEF
HHCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCE
EYMDARFLAPDHPDSLTELYIPIR
EEECCEECCCCCCCCHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA