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The map label for this gene is 34499662

Identifier: 34499662

GI number: 34499662

Start: 4538803

End: 4540587

Strand: Reverse

Name: 34499662

Synonym: CV_4207

Alternate gene names: NA

Gene position: 4540587-4538803 (Counterclockwise)

Preceding gene: 34499663

Following gene: 34499657

Centisome position: 95.57

GC content: 67.96

Gene sequence:

>1785_bases
ATGACTTTTCAGAAGATTTCCGAGCGCCTGGCTTTGCTGGCCCTGTGCCTGATCGCCATCGTGCCTTTCGCTTCCCGCGT
CCACTTCGTGCCGCTGCCGCAGTGGTTCGGCGAGATCAACGTGATCTGGCTGCTGTTGGCCGCCGGCGCCTTCCTGCTGC
CCGGAGGGCGGCTGTTCGACGCCATGCCGCGCGCCGGCTGGCTGTGCCTGGCGCTGGCGGGCGCCTGGGCGCTGCAGCCG
CAATTCGTCCACCTGCTGTTCCCGGGCATGAGCTACGTCACCGCGCTGGCCTGGCTGGCGACGGCGCTGCTGGCCTCGGT
CACGCTGTCGTTGCGCGGCGCCTTCGGCGACCGCGAGTTCGCCGTGTGGCTGGCGCGTGCGGTCATCGTCGGCGGCCTGG
CGCAGTCGCTGATCGGCACCGCCCAGCTGACCGGCCTGGCGCCGGCGCTGGGGCTGTTCTACGACGGCTCCCACCCCACC
AGCAACATCTTCGGCCACATCGGCCAACGCAACCAGTACGCCCATTACCTGATGTGGTCGGTGGTGTCCGGCGTCTACCT
GTTCGCCGTCGGCCGCCTGGGCAGGGCCTGGCTGATCGCGCTGGTGTTGTGGATGGCGCTGATGCTGGGCTGGGCCGGCT
CCCGCACCATTCTTCTTTACCTAGTGGCATTGTCGGCGCTGGCCGGCCTGTGGCATTGGCGCAGCAGGGACGAGAACTCG
CGCCGGATGATGCTGGCGATGTGGGCGGCCTCGGGCACGATTCTGGCCGCCCAGTTCGCGCTGCCCTTGTTCAATCACCT
GATCTCGCTGCTGACCCATTCCGACGTCGAGAACGCGTCCGGCGTGGCGCGGCTGGCTGCCAACGGCGACGACATGGGCG
CGCGCCGCTTCGCCGAGATGCACAAGGCCTGGCTGGCGTTCAAGGCGCATCCGCTGTGGGGCGTGGGCTGGTCGCAGTAC
GCTGCCGAGAGCGTGCGCCTGCAGCCGCTGCCGCAGTTCGCCGCCGCCGGCTACAATAGCGGCCTGTTCACCAATGCGCA
CAATCTGCTGATGCAGCTGCTGGCCGAGATGGGCGGCGTGGTGACCGCGCTGGTGGTGGCAGGCTTCGTCTGGGCGGTGC
TGCCCTTCTTCCGCCGCAAGGCCGAGCCCGAAGGCGTGCTGGCATTGGGCTGCATCGCGGTGACGCTGACCCACAGCATG
CTGGAGTACCCGCTGTGGTATTACTACTTCCTGGCGATGCTGGTGGTGTTCATGGCGATGGCGCCGCGCGGCGAGCGCGC
GCTGGCCTGGCCGCTGCGCCTGCCGCTGCTGGCGGCGCTGGCGTGGGTGGGCTGGCTGTCGATCAGCACCACGTCGATGT
TCTGGGAGCTGGTGAATCTCTACGTGCCGACCGGCAACGCGTCCAAGGACAAGGTCCGCGCCGAGCGCCTGATCGAGATC
GTCGAGACCAAGCCGCTGTTCGCCTACCATGCCTTGTACACGCTGGACGACTATCTGCCGGTGAATCGCGACAACTTGAG
GCAAAAGCTGGCGCTGGAAGACCGCCTGACCGCGTTCCGCCCGTATCCGGACGTGATGCTAAAGCGCGCGCAGCTGGAGC
TGCTGGCTGGGGAACGGGAGAAGGCCGAACGGACGCTGCGCACCACGCTGGCCTCGTTCCCGACTTACGCCGGCCAGTTC
CTGGAGACGCTGGGCGACCAGGATCCGGCCTGGGAGCCGCTGCGCCGCATCAGCCGCGAAGCCTACGACAAGCTGCCGGC
CAAGTTCCGCACCTTGCAGGAGTGA

Upstream 100 bases:

>100_bases
TGTTCTGAGCTTTGTAACGCGCCGACACACTTGATGGGTTTTGCCGGGGCGGCGCATGCGGTATGCTGCCCGCTTCCTGC
TTTCCGACGTCTGATCTGCC

Downstream 100 bases:

>100_bases
GGCGCGTTCCCCCGTCCCTATCGGCGGGGGAGGGCATGAAAAAAGCCGCTCGATGTTTCGAGTGGCTTTTTTTGCGACGG
ACGGGTGGAATCAGTTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipid A Core; Integral Membrane Protein; O-Antigen Polymerase Family; O-Antigen Polymerase Family Protein

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MTFQKISERLALLALCLIAIVPFASRVHFVPLPQWFGEINVIWLLLAAGAFLLPGGRLFDAMPRAGWLCLALAGAWALQP
QFVHLLFPGMSYVTALAWLATALLASVTLSLRGAFGDREFAVWLARAVIVGGLAQSLIGTAQLTGLAPALGLFYDGSHPT
SNIFGHIGQRNQYAHYLMWSVVSGVYLFAVGRLGRAWLIALVLWMALMLGWAGSRTILLYLVALSALAGLWHWRSRDENS
RRMMLAMWAASGTILAAQFALPLFNHLISLLTHSDVENASGVARLAANGDDMGARRFAEMHKAWLAFKAHPLWGVGWSQY
AAESVRLQPLPQFAAAGYNSGLFTNAHNLLMQLLAEMGGVVTALVVAGFVWAVLPFFRRKAEPEGVLALGCIAVTLTHSM
LEYPLWYYYFLAMLVVFMAMAPRGERALAWPLRLPLLAALAWVGWLSISTTSMFWELVNLYVPTGNASKDKVRAERLIEI
VETKPLFAYHALYTLDDYLPVNRDNLRQKLALEDRLTAFRPYPDVMLKRAQLELLAGEREKAERTLRTTLASFPTYAGQF
LETLGDQDPAWEPLRRISREAYDKLPAKFRTLQE

Sequences:

>Translated_594_residues
MTFQKISERLALLALCLIAIVPFASRVHFVPLPQWFGEINVIWLLLAAGAFLLPGGRLFDAMPRAGWLCLALAGAWALQP
QFVHLLFPGMSYVTALAWLATALLASVTLSLRGAFGDREFAVWLARAVIVGGLAQSLIGTAQLTGLAPALGLFYDGSHPT
SNIFGHIGQRNQYAHYLMWSVVSGVYLFAVGRLGRAWLIALVLWMALMLGWAGSRTILLYLVALSALAGLWHWRSRDENS
RRMMLAMWAASGTILAAQFALPLFNHLISLLTHSDVENASGVARLAANGDDMGARRFAEMHKAWLAFKAHPLWGVGWSQY
AAESVRLQPLPQFAAAGYNSGLFTNAHNLLMQLLAEMGGVVTALVVAGFVWAVLPFFRRKAEPEGVLALGCIAVTLTHSM
LEYPLWYYYFLAMLVVFMAMAPRGERALAWPLRLPLLAALAWVGWLSISTTSMFWELVNLYVPTGNASKDKVRAERLIEI
VETKPLFAYHALYTLDDYLPVNRDNLRQKLALEDRLTAFRPYPDVMLKRAQLELLAGEREKAERTLRTTLASFPTYAGQF
LETLGDQDPAWEPLRRISREAYDKLPAKFRTLQE
>Mature_593_residues
TFQKISERLALLALCLIAIVPFASRVHFVPLPQWFGEINVIWLLLAAGAFLLPGGRLFDAMPRAGWLCLALAGAWALQPQ
FVHLLFPGMSYVTALAWLATALLASVTLSLRGAFGDREFAVWLARAVIVGGLAQSLIGTAQLTGLAPALGLFYDGSHPTS
NIFGHIGQRNQYAHYLMWSVVSGVYLFAVGRLGRAWLIALVLWMALMLGWAGSRTILLYLVALSALAGLWHWRSRDENSR
RMMLAMWAASGTILAAQFALPLFNHLISLLTHSDVENASGVARLAANGDDMGARRFAEMHKAWLAFKAHPLWGVGWSQYA
AESVRLQPLPQFAAAGYNSGLFTNAHNLLMQLLAEMGGVVTALVVAGFVWAVLPFFRRKAEPEGVLALGCIAVTLTHSML
EYPLWYYYFLAMLVVFMAMAPRGERALAWPLRLPLLAALAWVGWLSISTTSMFWELVNLYVPTGNASKDKVRAERLIEIV
ETKPLFAYHALYTLDDYLPVNRDNLRQKLALEDRLTAFRPYPDVMLKRAQLELLAGEREKAERTLRTTLASFPTYAGQFL
ETLGDQDPAWEPLRRISREAYDKLPAKFRTLQE

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66093; Mature: 65962

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQKISERLALLALCLIAIVPFASRVHFVPLPQWFGEINVIWLLLAAGAFLLPGGRLFD
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AMPRAGWLCLALAGAWALQPQFVHLLFPGMSYVTALAWLATALLASVTLSLRGAFGDREF
CCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AVWLARAVIVGGLAQSLIGTAQLTGLAPALGLFYDGSHPTSNIFGHIGQRNQYAHYLMWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHH
VVSGVYLFAVGRLGRAWLIALVLWMALMLGWAGSRTILLYLVALSALAGLWHWRSRDENS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RRMMLAMWAASGTILAAQFALPLFNHLISLLTHSDVENASGVARLAANGDDMGARRFAEM
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHH
HKAWLAFKAHPLWGVGWSQYAAESVRLQPLPQFAAAGYNSGLFTNAHNLLMQLLAEMGGV
HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VTALVVAGFVWAVLPFFRRKAEPEGVLALGCIAVTLTHSMLEYPLWYYYFLAMLVVFMAM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APRGERALAWPLRLPLLAALAWVGWLSISTTSMFWELVNLYVPTGNASKDKVRAERLIEI
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VETKPLFAYHALYTLDDYLPVNRDNLRQKLALEDRLTAFRPYPDVMLKRAQLELLAGERE
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH
KAERTLRTTLASFPTYAGQFLETLGDQDPAWEPLRRISREAYDKLPAKFRTLQE
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure 
TFQKISERLALLALCLIAIVPFASRVHFVPLPQWFGEINVIWLLLAAGAFLLPGGRLFD
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AMPRAGWLCLALAGAWALQPQFVHLLFPGMSYVTALAWLATALLASVTLSLRGAFGDREF
CCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AVWLARAVIVGGLAQSLIGTAQLTGLAPALGLFYDGSHPTSNIFGHIGQRNQYAHYLMWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHH
VVSGVYLFAVGRLGRAWLIALVLWMALMLGWAGSRTILLYLVALSALAGLWHWRSRDENS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RRMMLAMWAASGTILAAQFALPLFNHLISLLTHSDVENASGVARLAANGDDMGARRFAEM
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHH
HKAWLAFKAHPLWGVGWSQYAAESVRLQPLPQFAAAGYNSGLFTNAHNLLMQLLAEMGGV
HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VTALVVAGFVWAVLPFFRRKAEPEGVLALGCIAVTLTHSMLEYPLWYYYFLAMLVVFMAM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APRGERALAWPLRLPLLAALAWVGWLSISTTSMFWELVNLYVPTGNASKDKVRAERLIEI
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VETKPLFAYHALYTLDDYLPVNRDNLRQKLALEDRLTAFRPYPDVMLKRAQLELLAGERE
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH
KAERTLRTTLASFPTYAGQFLETLGDQDPAWEPLRRISREAYDKLPAKFRTLQE
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA