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The map label for this gene is secE [H]

Identifier: 34499654

GI number: 34499654

Start: 4531632

End: 4531988

Strand: Reverse

Name: secE [H]

Synonym: CV_4199

Alternate gene names: 34499654

Gene position: 4531988-4531632 (Counterclockwise)

Preceding gene: 34499655

Following gene: 34499653

Centisome position: 95.39

GC content: 58.82

Gene sequence:

>357_bases
ATGGAAATGCAAGATAAGATCAAGTTGATCCTGGCTGGTCTTGTAGTAGTGGCCGGGGTTGTCGGCTTTTACCTGATTCC
CGAGGGTCAGGGTCTGCTGCGCGCGCTGGCTTTCGTCGCCTCCATCCTGCTGGCTGCCGGCGTGGTGTGGACTTCGGCGC
CCGGCAAGGGCTTGGTGACTTATGCCAACGAGTCCATGGTCGAGGCTCGCAAAGTGGTTTGGCCGACGCGCAAGGAGGCG
ACCCAGGTGACGCTGATGGTGTTCGTGTTCGTCACCGTCCTGGCGCTCTTCATGTGGCTGGTGGATTCCAGCCTGTCCTG
GCTGTTTTACGACGTGATACTCGGTCGAGGTAGATAA

Upstream 100 bases:

>100_bases
CGAGGGTTGGGGGTTCGAGACCCTCCTGGCCTGCCAATTAAGACCAGCCGGCGCACTGCGCCGGTTGGTCTTTTGTCGCA
TATGTGCGAGAGAAATCGAC

Downstream 100 bases:

>100_bases
TGGCAAAGCGCTGGTATGTGGTACACGCTTACTCCGGTTTTGAGAAAAGCGTGCAAAAAGCGCTGCGTGAACGTATCGAA
CGTTCCGACATCGCAGATCA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MEMQDKIKLILAGLVVVAGVVGFYLIPEGQGLLRALAFVASILLAAGVVWTSAPGKGLVTYANESMVEARKVVWPTRKEA
TQVTLMVFVFVTVLALFMWLVDSSLSWLFYDVILGRGR

Sequences:

>Translated_118_residues
MEMQDKIKLILAGLVVVAGVVGFYLIPEGQGLLRALAFVASILLAAGVVWTSAPGKGLVTYANESMVEARKVVWPTRKEA
TQVTLMVFVFVTVLALFMWLVDSSLSWLFYDVILGRGR
>Mature_118_residues
MEMQDKIKLILAGLVVVAGVVGFYLIPEGQGLLRALAFVASILLAAGVVWTSAPGKGLVTYANESMVEARKVVWPTRKEA
TQVTLMVFVFVTVLALFMWLVDSSLSWLFYDVILGRGR

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=84, Percent_Identity=41.6666666666667, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 12920; Mature: 12920

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMQDKIKLILAGLVVVAGVVGFYLIPEGQGLLRALAFVASILLAAGVVWTSAPGKGLVT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YANESMVEARKVVWPTRKEATQVTLMVFVFVTVLALFMWLVDSSLSWLFYDVILGRGR
ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MEMQDKIKLILAGLVVVAGVVGFYLIPEGQGLLRALAFVASILLAAGVVWTSAPGKGLVT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YANESMVEARKVVWPTRKEATQVTLMVFVFVTVLALFMWLVDSSLSWLFYDVILGRGR
ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]