| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ybeZ [H]
Identifier: 34499606
GI number: 34499606
Start: 4491669
End: 4492700
Strand: Direct
Name: ybeZ [H]
Synonym: CV_4151
Alternate gene names: 34499606
Gene position: 4491669-4492700 (Clockwise)
Preceding gene: 34499605
Following gene: 34499607
Centisome position: 94.54
GC content: 65.89
Gene sequence:
>1032_bases CTGCCAGGTCTCCCACGGCCGCCACGCCGCCGTTTTTCAAAAGTTAAGCCTACAACTGCAGAACGCATGAGCACTAGCGA ATCCCTCAGTTTCAACCCGGTCGACAACGAGCGGCTGGCCCGCCTGTGCGGCCCGCTGGACGAAAACCTCAAACAGGTGG AAACCGGCCTCGACGTCGCCATCCAGCGCCGCGGCGAAGCCTTCCGCGTGCAGGGCCCGGCCGCCAAGCTGGCGGTGGAG GCGCTGACCCGCCTCTACCTGCAGGCCGCCGAGCAGGACATCTCGATCGACGACGTGCAGCTGTCGCTGGTGGAGCTGCG CCAGCAACAGGCCAGCGGCGAACAGGAAGCGTCGCCGGTGCTGGCCACCCGCCGCGGCGACCTGAAAGGCCGCACGCCGA ACCAGGCGCGCTACATCAAGGCCATCCAGCAGCACGACGTCACCTTCGGCATCGGCCCGGCCGGCACCGGCAAGACCTAT CTCGCCGTCGCCTGCGCGGTGGACGCGATGGAGCGCGACGCGGTCAAGCGCATCGTGCTGGTGCGCCCGGCGGTGGAGGC CGGCGAAAAGCTGGGCTTCCTGCCCGGCGACCTGGCGCAGAAGGTGGACCCTTACTTACGCCCGCTGTACGACGCGCTGT ACGACCTGATGGGCTTCGACCGCGTCACCCGGCTGTTCGAGAAGAACCTGATCGAGATCGCGCCGCTGGCCTATATGCGC GGCCGCACGCTGAACCACGCCTTCATCATCCTGGACGAGGCGCAGAACACCACGCCCGAGCAGATGAAGATGTTCCTGAC CCGGATCGGCTTCGGCTCGCGCGCGGTGATCACCGGCGACGTCACCCAGATCGACCTGGCCCGCCACCAGAAGAGCGGCC TGGTCGAGGTGGAGCGCATCCTGGGCCACGTGCGCGGCATCCATTTCCACCATTTCAACAGCAACGACGTGGTGCGCCAT CCGCTGGTGCAGAAGATCGTCGACGCCTACGACCAATACCAAAGCAAGCAAGATGAAAAAAGCCAAGCGTAA
Upstream 100 bases:
>100_bases ACGCGCTGGCGCTGGAAAACCTCGCGCCCGAACATTGCCTGATGGTGGGCGACGACCCGGCGCGCGACATCGAACCGGCG CGCCGGCTGGGCATGGCGGC
Downstream 100 bases:
>100_bases CCCGCTGCTCGCCCGCCTGGCCGGACGGCTGGAATTGACCCTGGACGTGCGCAGCGACGCCGCCGCCCTGCCGCCCCCCG CGCTGATCCGCCGCGCCTGC
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPGLPRPPRRRFSKVKPTTAERMSTSESLSFNPVDNERLARLCGPLDENLKQVETGLDVAIQRRGEAFRVQGPAAKLAVE ALTRLYLQAAEQDISIDDVQLSLVELRQQQASGEQEASPVLATRRGDLKGRTPNQARYIKAIQQHDVTFGIGPAGTGKTY LAVACAVDAMERDAVKRIVLVRPAVEAGEKLGFLPGDLAQKVDPYLRPLYDALYDLMGFDRVTRLFEKNLIEIAPLAYMR GRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSRAVITGDVTQIDLARHQKSGLVEVERILGHVRGIHFHHFNSNDVVRH PLVQKIVDAYDQYQSKQDEKSQA
Sequences:
>Translated_343_residues MPGLPRPPRRRFSKVKPTTAERMSTSESLSFNPVDNERLARLCGPLDENLKQVETGLDVAIQRRGEAFRVQGPAAKLAVE ALTRLYLQAAEQDISIDDVQLSLVELRQQQASGEQEASPVLATRRGDLKGRTPNQARYIKAIQQHDVTFGIGPAGTGKTY LAVACAVDAMERDAVKRIVLVRPAVEAGEKLGFLPGDLAQKVDPYLRPLYDALYDLMGFDRVTRLFEKNLIEIAPLAYMR GRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSRAVITGDVTQIDLARHQKSGLVEVERILGHVRGIHFHHFNSNDVVRH PLVQKIVDAYDQYQSKQDEKSQA >Mature_342_residues PGLPRPPRRRFSKVKPTTAERMSTSESLSFNPVDNERLARLCGPLDENLKQVETGLDVAIQRRGEAFRVQGPAAKLAVEA LTRLYLQAAEQDISIDDVQLSLVELRQQQASGEQEASPVLATRRGDLKGRTPNQARYIKAIQQHDVTFGIGPAGTGKTYL AVACAVDAMERDAVKRIVLVRPAVEAGEKLGFLPGDLAQKVDPYLRPLYDALYDLMGFDRVTRLFEKNLIEIAPLAYMRG RTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSRAVITGDVTQIDLARHQKSGLVEVERILGHVRGIHFHHFNSNDVVRHP LVQKIVDAYDQYQSKQDEKSQA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=329, Percent_Identity=55.6231003039514, Blast_Score=349, Evalue=2e-97, Organism=Escherichia coli, GI1787257, Length=241, Percent_Identity=42.3236514522822, Blast_Score=175, Evalue=4e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38333; Mature: 38202
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLPRPPRRRFSKVKPTTAERMSTSESLSFNPVDNERLARLCGPLDENLKQVETGLDVA CCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH IQRRGEAFRVQGPAAKLAVEALTRLYLQAAEQDISIDDVQLSLVELRQQQASGEQEASPV HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCH LATRRGDLKGRTPNQARYIKAIQQHDVTFGIGPAGTGKTYLAVACAVDAMERDAVKRIVL HHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VRPAVEAGEKLGFLPGDLAQKVDPYLRPLYDALYDLMGFDRVTRLFEKNLIEIAPLAYMR CCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSRAVITGDVTQIDLARHQKSGLVEVERI CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCHHHHHHH LGHVRGIHFHHFNSNDVVRHPLVQKIVDAYDQYQSKQDEKSQA HHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure PGLPRPPRRRFSKVKPTTAERMSTSESLSFNPVDNERLARLCGPLDENLKQVETGLDVA CCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH IQRRGEAFRVQGPAAKLAVEALTRLYLQAAEQDISIDDVQLSLVELRQQQASGEQEASPV HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCH LATRRGDLKGRTPNQARYIKAIQQHDVTFGIGPAGTGKTYLAVACAVDAMERDAVKRIVL HHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VRPAVEAGEKLGFLPGDLAQKVDPYLRPLYDALYDLMGFDRVTRLFEKNLIEIAPLAYMR CCCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSRAVITGDVTQIDLARHQKSGLVEVERI CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCHHHHHHH LGHVRGIHFHHFNSNDVVRHPLVQKIVDAYDQYQSKQDEKSQA HHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]