Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34499583

Identifier: 34499583

GI number: 34499583

Start: 4468156

End: 4468728

Strand: Reverse

Name: 34499583

Synonym: CV_4128

Alternate gene names: NA

Gene position: 4468728-4468156 (Counterclockwise)

Preceding gene: 34499584

Following gene: 34499582

Centisome position: 94.06

GC content: 67.54

Gene sequence:

>573_bases
TTGCCCCCGCCGGGGGCGTGGCTGGCGGCGCTGGGCGCGCTCGCGCTGCTGGCCGTGCTGGCGCTGGTGCCGCTGATCCG
CTATTCCAAGAGCTGGCTGGTGGCCGAAACGCCGCAGCCGCGGGCGGACTGGATCGTGGTGCTGGGCGGGGAGAGCGGCG
AGCGGGTGATAGGCGCGGCGGAACTGTACCATCAGGGCCGCGCGCCTTTCGTCTTCGTCAGCGGCGAGGGCGATTGCCTG
CTGATCGTCAGGCGGCTGCAGATGGCCGGCGTGCCGCGCGGGAAGATAGGCTATGAGTGCCTGTCCAAGAGCACATGGCA
GAACGCCGTGCTCACCCGGCAGGCGCTGGCCTCGCGCCAGCCCAGGCGGATCACGCTGGTGACCTCGTGGTTCCATTCGC
GGCGGGCGCTGGAGACTTTCCGCCAGGCCTGGCCGGAAGTGGAGTGGGGCATGCACATCGTGTACCCGGGCAACGACCTG
TACCACAGCCTGGCCTGGTACGAAGCCGGCGCGGTGCTGACCGAATATTTGAAGATACTGGTGTATTCAGTACGTTACTG
GACGTTCAGATGA

Upstream 100 bases:

>100_bases
CGAGCTGATCAAGGCCAAGGCCCAACTGGTGGTGGACAGCCGCGGCAAGTACCTGGAGCCCGCCGAGCACATCGTCAAGG
CCTAAGGCGTGTGCGGACGC

Downstream 100 bases:

>100_bases
TAGTGATTCCTCCGATTACCGATCGCAAGATCCGTTTCGCCCTGGTCGGCTGCGGCCGCATCGCCAACAACCACTTCGGC
GCGCTGGAGAAGCACGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCL
LIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDL
YHSLAWYEAGAVLTEYLKILVYSVRYWTFR

Sequences:

>Translated_190_residues
MPPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCL
LIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDL
YHSLAWYEAGAVLTEYLKILVYSVRYWTFR
>Mature_189_residues
PPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCLL
IVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDLY
HSLAWYEAGAVLTEYLKILVYSVRYWTFR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21439; Mature: 21308

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCEEEHHH
ELYHQGRAPFVFVSGEGDCLLIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQ
HHHHCCCCCEEEEECCCCEEHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCC
PRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDLYHSLAWYEAGAVLTEYLKIL
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
VYSVRYWTFR
HHHHHHEECC
>Mature Secondary Structure 
PPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCEEEHHH
ELYHQGRAPFVFVSGEGDCLLIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQ
HHHHCCCCCEEEEECCCCEEHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCC
PRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDLYHSLAWYEAGAVLTEYLKIL
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
VYSVRYWTFR
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA