| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499575
Identifier: 34499575
GI number: 34499575
Start: 4461017
End: 4462120
Strand: Reverse
Name: 34499575
Synonym: CV_4120
Alternate gene names: NA
Gene position: 4462120-4461017 (Counterclockwise)
Preceding gene: 34499577
Following gene: 34499574
Centisome position: 93.92
GC content: 67.75
Gene sequence:
>1104_bases TTGAACAAGATGAAAATAGCCCACCTGACCTCCGCCCATCCGCGCCACGACATCCGCATCTTCGTCAAGGAATGCAGCTC GCTGGCGGCGGCCGGCCACGAGGTGACGCTGATCGTCGCCGACGGCCAGGGCGAGGAAATCCGCAACGGCGTGCGCATCC ATGACGTCGGCCCCAAGCGCGGCGGCCGTCTGGCGCGGATGACCGGCACCGTCAAGCGCGTCTATCAGGCCGCGCTGAGG CTGCGGCCGGACGTGGTGCATTTCCACGATCCGGAGCTGATTCCCGCCGGCGTGCGCCTGAAGCAGGCCGGCATCAAGGT GGTGTACGACGTGCACGAGGACGTGCCGCGCCAGATCCTGGCCAAGCATTGGATACCCGGCGCGGTGCGCCCGCTGGTGT CCGGCGGCTTCGAGACGCTGGAAGACTGGGCGGCGCGCCGCTTCGACGCCATCGTCACCTCCACCCCCCACATCCGCAAA CGCTTCGAGAGACTGGGCGCCAACGCCCTGGACGTGTGCAACTTCCCGATCCTGGAAGAGCTGGTGCGCGACACGCCGTG GGAAAGCCGCCGCAACGAGGTGTGCTATATCGGCGGCATCAGCCGCATCCGCGGCATCGAGCCGATTGTCGCCGCCTTGC CGGACACATCCACCCGGCTGAACCTGGCCGGCCCGTGGAGCGAAAGCGACCTCCGCGCCAAGGTGACGGCCGAGCCGGGC TGGGCGCGGGTCAACGACCTGGGCGTGCTGGACCGCAAGGGCGTGGCCGAGGTATTGGCCAGGAGCAAGATCGGCCTGGT GACGCTGTTTCCCACGCCCAACTACGTCGACGCGCTGCCGATCAAGCTGTTCGAATACATGGCCGCCGGCATGCCGGTGA TCGCCAGCGACTTCCCGGTGTGGCGCGAGATCGTAGCCGACGCCGGCTGCGGCGTGCTGGTAGACCCGCAGGATGCCGCC GCCATCGCGGCCGCCATCAACGAACTGCTGGGCGACGAAGAACGCATGCGCAAGCTGGGCGAGTCCGGCAAGCGGGCTGT GCTGAGCAAGTACAGCTGGGCGGCGGAGGCCGACAAGCTGGTGGCGCTGTATGCGTCCTTGTAA
Upstream 100 bases:
>100_bases TGGCCGAGATGAACCGCGGCCTGGTGGCGGCCAAGGCGCTGCACCGGGCCAATATGGCCGGCTTCGCCGATCTGATCCGC GAGCTGGCCGCCAACAAGGT
Downstream 100 bases:
>100_bases AAACTAAAGGATGATTTAGCCACGGAAGCCACACGGAAAGACATGGAAGCATCGCTGTTGAAGTCTGGACAGCTGCAGTT CAAGCCGCACTTGAGTTTTG
Product: glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase WbpH; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase; Capsular Polysaccharide Synthesis Cap5I; WblG Protein; Galactosyltransferase
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MNKMKIAHLTSAHPRHDIRIFVKECSSLAAAGHEVTLIVADGQGEEIRNGVRIHDVGPKRGGRLARMTGTVKRVYQAALR LRPDVVHFHDPELIPAGVRLKQAGIKVVYDVHEDVPRQILAKHWIPGAVRPLVSGGFETLEDWAARRFDAIVTSTPHIRK RFERLGANALDVCNFPILEELVRDTPWESRRNEVCYIGGISRIRGIEPIVAALPDTSTRLNLAGPWSESDLRAKVTAEPG WARVNDLGVLDRKGVAEVLARSKIGLVTLFPTPNYVDALPIKLFEYMAAGMPVIASDFPVWREIVADAGCGVLVDPQDAA AIAAAINELLGDEERMRKLGESGKRAVLSKYSWAAEADKLVALYASL
Sequences:
>Translated_367_residues MNKMKIAHLTSAHPRHDIRIFVKECSSLAAAGHEVTLIVADGQGEEIRNGVRIHDVGPKRGGRLARMTGTVKRVYQAALR LRPDVVHFHDPELIPAGVRLKQAGIKVVYDVHEDVPRQILAKHWIPGAVRPLVSGGFETLEDWAARRFDAIVTSTPHIRK RFERLGANALDVCNFPILEELVRDTPWESRRNEVCYIGGISRIRGIEPIVAALPDTSTRLNLAGPWSESDLRAKVTAEPG WARVNDLGVLDRKGVAEVLARSKIGLVTLFPTPNYVDALPIKLFEYMAAGMPVIASDFPVWREIVADAGCGVLVDPQDAA AIAAAINELLGDEERMRKLGESGKRAVLSKYSWAAEADKLVALYASL >Mature_367_residues MNKMKIAHLTSAHPRHDIRIFVKECSSLAAAGHEVTLIVADGQGEEIRNGVRIHDVGPKRGGRLARMTGTVKRVYQAALR LRPDVVHFHDPELIPAGVRLKQAGIKVVYDVHEDVPRQILAKHWIPGAVRPLVSGGFETLEDWAARRFDAIVTSTPHIRK RFERLGANALDVCNFPILEELVRDTPWESRRNEVCYIGGISRIRGIEPIVAALPDTSTRLNLAGPWSESDLRAKVTAEPG WARVNDLGVLDRKGVAEVLARSKIGLVTLFPTPNYVDALPIKLFEYMAAGMPVIASDFPVWREIVADAGCGVLVDPQDAA AIAAAINELLGDEERMRKLGESGKRAVLSKYSWAAEADKLVALYASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40340; Mature: 40340
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMKIAHLTSAHPRHDIRIFVKECSSLAAAGHEVTLIVADGQGEEIRNGVRIHDVGPKR CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCEEEEECCCCC GGRLARMTGTVKRVYQAALRLRPDVVHFHDPELIPAGVRLKQAGIKVVYDVHEDVPRQIL CCEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCEEEEEHHHHHHHHHH AKHWIPGAVRPLVSGGFETLEDWAARRFDAIVTSTPHIRKRFERLGANALDVCNFPILEE HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCHHHHH LVRDTPWESRRNEVCYIGGISRIRGIEPIVAALPDTSTRLNLAGPWSESDLRAKVTAEPG HHHCCCCCCCCCCEEEEECHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCC WARVNDLGVLDRKGVAEVLARSKIGLVTLFPTPNYVDALPIKLFEYMAAGMPVIASDFPV CCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCHH WREIVADAGCGVLVDPQDAAAIAAAINELLGDEERMRKLGESGKRAVLSKYSWAAEADKL HHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH VALYASL HHHHHCC >Mature Secondary Structure MNKMKIAHLTSAHPRHDIRIFVKECSSLAAAGHEVTLIVADGQGEEIRNGVRIHDVGPKR CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCEEEEECCCCC GGRLARMTGTVKRVYQAALRLRPDVVHFHDPELIPAGVRLKQAGIKVVYDVHEDVPRQIL CCEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCEEEEEHHHHHHHHHH AKHWIPGAVRPLVSGGFETLEDWAARRFDAIVTSTPHIRKRFERLGANALDVCNFPILEE HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCHHHHH LVRDTPWESRRNEVCYIGGISRIRGIEPIVAALPDTSTRLNLAGPWSESDLRAKVTAEPG HHHCCCCCCCCCCEEEEECHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCC WARVNDLGVLDRKGVAEVLARSKIGLVTLFPTPNYVDALPIKLFEYMAAGMPVIASDFPV CCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCHH WREIVADAGCGVLVDPQDAAAIAAAINELLGDEERMRKLGESGKRAVLSKYSWAAEADKL HHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH VALYASL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA