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The map label for this gene is 34499530

Identifier: 34499530

GI number: 34499530

Start: 4408389

End: 4409873

Strand: Reverse

Name: 34499530

Synonym: CV_4075

Alternate gene names: NA

Gene position: 4409873-4408389 (Counterclockwise)

Preceding gene: 34499531

Following gene: 34499529

Centisome position: 92.82

GC content: 63.91

Gene sequence:

>1485_bases
ATGTTTGAATCCGCCGAGATCGGCCACAGCATAGACAAAGACACTTTCCGCAAGATGATGCCGGCGCTGCGCGAGGCGCT
GCTGGACGTGCAGTACGATCTGAAGGAGTCGGCCGAATTCCCGGTGCTGATCCTGATCCACGGTTTCGACGGCGCCGGCC
GCGGCGAAACGATGAATCTGATCAACGAGTGGCTGGACCCGCGCCTGATCGACACCGTCGCCTTCGACAAGCCCAACGAC
GAGGCGCGCGCCCGGCCGTGGATGTGGCGCTATTGGAACGAGCTGCCGGCCACCGGACGCATCGGCATGTTCTTCGGCTC
CTATTATTCCGATACCCTGTTCGACCGGGTGTTCAGCCGCAGCGACCGCGACGCCTTCGATCGGCAGATTTTCGACATCC
TGCGCTTCGAGCGCATGCTGACGCAGGATGGCGTGGTGGTGCTGAAGTTCTGGTTCCACCTGAGCCGCGACAAGCAGAAA
CAGCGGCTGAAGACGCTGGAGCAGGATCCGGCCACCAGTTGGCGCGTGACCAAGACCGACTGGGAGCACTATGAGCGCTA
CGACAAGATCCGCAAGTACGGCGAGCACATGCTCAGGCTGACCAACACCGCGCACGCGCCGTGGATCGTCATCGACGGCG
AGGACGCCAACTACCGCAGCCTGACCGTGGGCAACACCATACTGGAGGCGATACGCAACCGCATCGGCCAGCCGGTGCTG
GCCACCGACCGGGTGGAGGCGCCGCCGCTGCTGGCGCCGATAGACAACAAGCTGGTGCTGGACACGCTGGAGCTGGAGCA
GAAGCTGGACAAGGCCAGCTACCAGAAAAAGCTGGACCAGCTGCAGGGGCGGCTGAACAAGCTGACCCGCGATCCGCGCT
TCGGCGCGCATTCGCTGGTGCTGGTGTTCGAGGGCAACGATGCGGCCGGCAAGGGCGGCAGCATACGCCGCATCACCCAG
GCGCTGGACGCCCGCCGCTACCGGGTGGTGCCGGTGGCGGCGCCGACGCAGGAGGAAAAGTCCAAGCCGTGGCTGTGGCG
CTTCTGGCGGCACCTGCCCGGCAAGGGCGGCATCACCATTTTCGACCGCAGCTGGTACGGCCGGGTGCTGGTGGAGCGGG
TGGAAGGCTTCGCTCCCGAGGCGGACTGGATGCGCGCTTATTACGAGATCAACGATTTCGAGCACCAGCTGACCGAGAAC
GGCGCCATCGTGCTGAAGTTCTGGCTGGCCATCAGCAAGGAAGAGCAGCTGGCCCGCTTCAAGGGCCGCGAGGAGACCGG
TTTCAAGCGCTTCAAGATCACCGACGAGGACTGGCGCAACCGCGACAAATGGGACCTCTACCGCCAGGCGGTCAGCGACA
TGGTGGACCGCACCAGCACCAGCAAGGTGCCGTGGACGCTGGTCGAGGCCAACAACAAATATTTTGCGCGCATCAAGATA
CTGTCCACCATCTGCGACGCGCTGGAGGCCAGGCTGGGTGAATAG

Upstream 100 bases:

>100_bases
GCTGGCGGGATCCGGAACCAAGAGAGGCCCTGGTAGTTCTACGCAATGATGGCGGCCGGGGATGGCAACTAAGCTAAGCA
AGTGGACAAGGAAGTGAAAC

Downstream 100 bases:

>100_bases
GCTGTGGTGGGGGCTGATGCTGTTGCTGTGCCTGCCGGCGCTGGCGGAAACCACGCTGCGCGCCGGCGTGGCCAACGACA
GCGGCGAATCGCTGCGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MFESAEIGHSIDKDTFRKMMPALREALLDVQYDLKESAEFPVLILIHGFDGAGRGETMNLINEWLDPRLIDTVAFDKPND
EARARPWMWRYWNELPATGRIGMFFGSYYSDTLFDRVFSRSDRDAFDRQIFDILRFERMLTQDGVVVLKFWFHLSRDKQK
QRLKTLEQDPATSWRVTKTDWEHYERYDKIRKYGEHMLRLTNTAHAPWIVIDGEDANYRSLTVGNTILEAIRNRIGQPVL
ATDRVEAPPLLAPIDNKLVLDTLELEQKLDKASYQKKLDQLQGRLNKLTRDPRFGAHSLVLVFEGNDAAGKGGSIRRITQ
ALDARRYRVVPVAAPTQEEKSKPWLWRFWRHLPGKGGITIFDRSWYGRVLVERVEGFAPEADWMRAYYEINDFEHQLTEN
GAIVLKFWLAISKEEQLARFKGREETGFKRFKITDEDWRNRDKWDLYRQAVSDMVDRTSTSKVPWTLVEANNKYFARIKI
LSTICDALEARLGE

Sequences:

>Translated_494_residues
MFESAEIGHSIDKDTFRKMMPALREALLDVQYDLKESAEFPVLILIHGFDGAGRGETMNLINEWLDPRLIDTVAFDKPND
EARARPWMWRYWNELPATGRIGMFFGSYYSDTLFDRVFSRSDRDAFDRQIFDILRFERMLTQDGVVVLKFWFHLSRDKQK
QRLKTLEQDPATSWRVTKTDWEHYERYDKIRKYGEHMLRLTNTAHAPWIVIDGEDANYRSLTVGNTILEAIRNRIGQPVL
ATDRVEAPPLLAPIDNKLVLDTLELEQKLDKASYQKKLDQLQGRLNKLTRDPRFGAHSLVLVFEGNDAAGKGGSIRRITQ
ALDARRYRVVPVAAPTQEEKSKPWLWRFWRHLPGKGGITIFDRSWYGRVLVERVEGFAPEADWMRAYYEINDFEHQLTEN
GAIVLKFWLAISKEEQLARFKGREETGFKRFKITDEDWRNRDKWDLYRQAVSDMVDRTSTSKVPWTLVEANNKYFARIKI
LSTICDALEARLGE
>Mature_494_residues
MFESAEIGHSIDKDTFRKMMPALREALLDVQYDLKESAEFPVLILIHGFDGAGRGETMNLINEWLDPRLIDTVAFDKPND
EARARPWMWRYWNELPATGRIGMFFGSYYSDTLFDRVFSRSDRDAFDRQIFDILRFERMLTQDGVVVLKFWFHLSRDKQK
QRLKTLEQDPATSWRVTKTDWEHYERYDKIRKYGEHMLRLTNTAHAPWIVIDGEDANYRSLTVGNTILEAIRNRIGQPVL
ATDRVEAPPLLAPIDNKLVLDTLELEQKLDKASYQKKLDQLQGRLNKLTRDPRFGAHSLVLVFEGNDAAGKGGSIRRITQ
ALDARRYRVVPVAAPTQEEKSKPWLWRFWRHLPGKGGITIFDRSWYGRVLVERVEGFAPEADWMRAYYEINDFEHQLTEN
GAIVLKFWLAISKEEQLARFKGREETGFKRFKITDEDWRNRDKWDLYRQAVSDMVDRTSTSKVPWTLVEANNKYFARIKI
LSTICDALEARLGE

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 57883; Mature: 57883

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFESAEIGHSIDKDTFRKMMPALREALLDVQYDLKESAEFPVLILIHGFDGAGRGETMNL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHH
INEWLDPRLIDTVAFDKPNDEARARPWMWRYWNELPATGRIGMFFGSYYSDTLFDRVFSR
HHHHCCCHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
SDRDAFDRQIFDILRFERMLTQDGVVVLKFWFHLSRDKQKQRLKTLEQDPATSWRVTKTD
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCC
WEHYERYDKIRKYGEHMLRLTNTAHAPWIVIDGEDANYRSLTVGNTILEAIRNRIGQPVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCEE
ATDRVEAPPLLAPIDNKLVLDTLELEQKLDKASYQKKLDQLQGRLNKLTRDPRFGAHSLV
ECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LVFEGNDAAGKGGSIRRITQALDARRYRVVPVAAPTQEEKSKPWLWRFWRHLPGKGGITI
EEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEE
FDRSWYGRVLVERVEGFAPEADWMRAYYEINDFEHQLTENGAIVLKFWLAISKEEQLARF
EECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHH
KGREETGFKRFKITDEDWRNRDKWDLYRQAVSDMVDRTSTSKVPWTLVEANNKYFARIKI
CCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHH
LSTICDALEARLGE
HHHHHHHHHHHCCC
>Mature Secondary Structure
MFESAEIGHSIDKDTFRKMMPALREALLDVQYDLKESAEFPVLILIHGFDGAGRGETMNL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHH
INEWLDPRLIDTVAFDKPNDEARARPWMWRYWNELPATGRIGMFFGSYYSDTLFDRVFSR
HHHHCCCHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
SDRDAFDRQIFDILRFERMLTQDGVVVLKFWFHLSRDKQKQRLKTLEQDPATSWRVTKTD
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCC
WEHYERYDKIRKYGEHMLRLTNTAHAPWIVIDGEDANYRSLTVGNTILEAIRNRIGQPVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCEE
ATDRVEAPPLLAPIDNKLVLDTLELEQKLDKASYQKKLDQLQGRLNKLTRDPRFGAHSLV
ECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LVFEGNDAAGKGGSIRRITQALDARRYRVVPVAAPTQEEKSKPWLWRFWRHLPGKGGITI
EEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEE
FDRSWYGRVLVERVEGFAPEADWMRAYYEINDFEHQLTENGAIVLKFWLAISKEEQLARF
EECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHH
KGREETGFKRFKITDEDWRNRDKWDLYRQAVSDMVDRTSTSKVPWTLVEANNKYFARIKI
CCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHH
LSTICDALEARLGE
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]