| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is iaaA [H]
Identifier: 34499502
GI number: 34499502
Start: 4377987
End: 4378922
Strand: Direct
Name: iaaA [H]
Synonym: CV_4047
Alternate gene names: 34499502
Gene position: 4377987-4378922 (Clockwise)
Preceding gene: 34499499
Following gene: 34499505
Centisome position: 92.15
GC content: 72.22
Gene sequence:
>936_bases ATGACCATCGCCCTCGCCTTGCACGGCGGCGCCGGCACCCTGCGCCGCAGCGACATGGACGCCGAATTGGAGCGCGCCTA CCGCGCCGGCCTGGAACAGGCGCTGGAGGCCGGCCACGCGGTGCTGCGCGGCGGCGGCGCGGCGCTGGATGCGGTGTGCG CGGCGGTCTGCGCGCTGGAGGACGATCCACTGTTCAACGCCGGCCGCGGCTCGGTGTTCAATCTGGACGGCAAACAGGAA ATGGAAGCGGCGGTGATGGACGGCATCCGCCAGGACGCCGGCAGCGTAGCCGGCCTTTCCGGCGTGCGCAACCCGGTGCT GCTGGCGCGCGCGGTGATGGAGCGCACACCCCACGTGACGCTGGGGTATGCGGCGGCGGAAGATTTCGCCCGCCGGGCAG GATTGGAAATGCGGCCGCCGGAATACTTCCACACCGACAAGCGCTGGCAGGCGCTGCTGGCGGAAAAGGAGAGGCTGGCC AACGGCGGCTCGGACGAGGACATCTCCGAAGACCGCAAGCACGGCACCGTCGGCGCGGTGGCGCTGGACGCGCAAGGCCG GCTGGCGGCCGCCACCTCCACCGGCGGCCGCACCGCCAAGTGGCCAGGCCGCATCGGCGACACGCCGGTGATCGGCGCCG GCACCTGGGCCGACGCCTATTGCGCGGTGTCGGCCACCGGCCACGGCGAATACTTCGTCCGCGCCGCCGCCGGGCACGAG ATCTCGGCCCGGATCCGCCACCTGGACGAAACCGTGGCCCAGGCTTGCGACGCCGTGGTCTACGGCCAGCTGCTGACCAT GGGCGGCACCGGCGGCGTCGTCGCCGTCGACCGCTACGGCCGGGTGGCGTTGCCGTTCAACTGCGAGGGCATGTACCGCG CGGCGATAGACGGCGCGGGCTTACGCACCGTCGCCATCTACCGCGGCGAAGACTAG
Upstream 100 bases:
>100_bases GGCAAGCCGGCCACGCCCATCGTCTTCGTTGCGCATCGCTGGCGAACTCCCATCAAAAGCCTCATGCTAACAGTCCATTC GCCACCCTGGAGATCGACAC
Downstream 100 bases:
>100_bases CGGTAGGCGGCCTGCCACTCCGCCTGCAGCTGGGCGATCAGTTCCGCCGCCGGCATCTCGCGCGCGTCGGCGACGCCCTC GCCCGCCCACAACGACATCA
Product: L-asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTIALALHGGAGTLRRSDMDAELERAYRAGLEQALEAGHAVLRGGGAALDAVCAAVCALEDDPLFNAGRGSVFNLDGKQE MEAAVMDGIRQDAGSVAGLSGVRNPVLLARAVMERTPHVTLGYAAAEDFARRAGLEMRPPEYFHTDKRWQALLAEKERLA NGGSDEDISEDRKHGTVGAVALDAQGRLAAATSTGGRTAKWPGRIGDTPVIGAGTWADAYCAVSATGHGEYFVRAAAGHE ISARIRHLDETVAQACDAVVYGQLLTMGGTGGVVAVDRYGRVALPFNCEGMYRAAIDGAGLRTVAIYRGED
Sequences:
>Translated_311_residues MTIALALHGGAGTLRRSDMDAELERAYRAGLEQALEAGHAVLRGGGAALDAVCAAVCALEDDPLFNAGRGSVFNLDGKQE MEAAVMDGIRQDAGSVAGLSGVRNPVLLARAVMERTPHVTLGYAAAEDFARRAGLEMRPPEYFHTDKRWQALLAEKERLA NGGSDEDISEDRKHGTVGAVALDAQGRLAAATSTGGRTAKWPGRIGDTPVIGAGTWADAYCAVSATGHGEYFVRAAAGHE ISARIRHLDETVAQACDAVVYGQLLTMGGTGGVVAVDRYGRVALPFNCEGMYRAAIDGAGLRTVAIYRGED >Mature_310_residues TIALALHGGAGTLRRSDMDAELERAYRAGLEQALEAGHAVLRGGGAALDAVCAAVCALEDDPLFNAGRGSVFNLDGKQEM EAAVMDGIRQDAGSVAGLSGVRNPVLLARAVMERTPHVTLGYAAAEDFARRAGLEMRPPEYFHTDKRWQALLAEKERLAN GGSDEDISEDRKHGTVGAVALDAQGRLAAATSTGGRTAKWPGRIGDTPVIGAGTWADAYCAVSATGHGEYFVRAAAGHEI SARIRHLDETVAQACDAVVYGQLLTMGGTGGVVAVDRYGRVALPFNCEGMYRAAIDGAGLRTVAIYRGED
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=301, Percent_Identity=40.1993355481728, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI145275200, Length=301, Percent_Identity=40.1993355481728, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI98991769, Length=274, Percent_Identity=33.5766423357664, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI285002251, Length=211, Percent_Identity=30.3317535545024, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI285002253, Length=211, Percent_Identity=28.436018957346, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1787050, Length=307, Percent_Identity=48.8599348534202, Blast_Score=263, Evalue=1e-71, Organism=Drosophila melanogaster, GI18921183, Length=305, Percent_Identity=37.7049180327869, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI21357893, Length=269, Percent_Identity=31.9702602230483, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI24652135, Length=187, Percent_Identity=33.6898395721925, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI221330102, Length=187, Percent_Identity=33.6898395721925, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 32583; Mature: 32452
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIALALHGGAGTLRRSDMDAELERAYRAGLEQALEAGHAVLRGGGAALDAVCAAVCALE CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHEECCCCHHHHHHHHHHHHCC DDPLFNAGRGSVFNLDGKQEMEAAVMDGIRQDAGSVAGLSGVRNPVLLARAVMERTPHVT CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEE LGYAAAEDFARRAGLEMRPPEYFHTDKRWQALLAEKERLANGGSDEDISEDRKHGTVGAV EEHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEE ALDAQGRLAAATSTGGRTAKWPGRIGDTPVIGAGTWADAYCAVSATGHGEYFVRAAAGHE EECCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEECCCCH ISARIRHLDETVAQACDAVVYGQLLTMGGTGGVVAVDRYGRVALPFNCEGMYRAAIDGAG HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCC LRTVAIYRGED CEEEEEEECCC >Mature Secondary Structure TIALALHGGAGTLRRSDMDAELERAYRAGLEQALEAGHAVLRGGGAALDAVCAAVCALE EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHEECCCCHHHHHHHHHHHHCC DDPLFNAGRGSVFNLDGKQEMEAAVMDGIRQDAGSVAGLSGVRNPVLLARAVMERTPHVT CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEE LGYAAAEDFARRAGLEMRPPEYFHTDKRWQALLAEKERLANGGSDEDISEDRKHGTVGAV EEHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEE ALDAQGRLAAATSTGGRTAKWPGRIGDTPVIGAGTWADAYCAVSATGHGEYFVRAAAGHE EECCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEECCCCH ISARIRHLDETVAQACDAVVYGQLLTMGGTGGVVAVDRYGRVALPFNCEGMYRAAIDGAG HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCC LRTVAIYRGED CEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]