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The map label for this gene is 34499438

Identifier: 34499438

GI number: 34499438

Start: 4310149

End: 4311495

Strand: Direct

Name: 34499438

Synonym: CV_3983

Alternate gene names: NA

Gene position: 4310149-4311495 (Clockwise)

Preceding gene: 34499437

Following gene: 34499439

Centisome position: 90.72

GC content: 65.4

Gene sequence:

>1347_bases
ATGCTTCAAGCACAGAGAATCCTATGGGGCGAAGGCATGTTTCTTCGCCCGCAACATTTCCAGCAGCACGCGCTGTTCCA
GGAACAGACCCAGGCCAGCCTGCTGCATCTGACCCACCGCCACGCCTGGGGCGTGCAGCGATTGGCGCTTGACGAGGCCG
CGCTGAAGGGCGGCATCGTCCGCGTCGACGAACTGACGCTGCTGTTCCGCGACGGCACGCTGCTACAGGCGCCCTCCCAC
GCGCCGCTGCCGCTGAGCCGCGACCTGGCCTCCATGCCTCAGGTCGGCGTGAAGACCACGCTATACGCCTGCCTGGCGCA
GTTGCAGCCTTATGGCGGCAATACCCGCAATGGCGAGGCCAGCGCCCGCCCCACTCGCTTCCACAGCGACCATCGCGAAG
TGTCCGACCTGTACACCCAGGCGCTTGCGGCCGATCTGTCGACGCTGCAGCTGGACGTCAAGCTGATGCTGGAGGAGGAA
AACCGCGACGGCCACGACGCCATCCCGCTGTGCCAGCTGGAGAAGGACGCCACCGGCCAATGGGGCGTGGGCCGCGAATT
CCTGCCGCCGCTGCTGGCCATCGAGGGCTCGACCGAGCTGATGCAGATGCTGCGCCGCCTGCTGGACATCCTGCTGGTGA
AAAGCCAGTCGCTGGCCGGCGCCCACCGCGAGCGCGCCAAGAGCGTGATGGAATTCGGCTCCGCCGACATCAGCTCCTTC
TGGCTGCTGCACACGGTCAACCGCAATTTCGCGCGCCTGCGCCACCTGTCGCAGTCCCAGCCGCTGCATCCGGAAGAGCT
GTACATGGCGCTGTCCGAGTTCTGCGGCGAACTGCAGACCTTCACCACGCTGTACACGCTGTCCGATATTCCGGCCTACC
GCCACGACGGGCTGCACGAGGTGTTCCCGCCGCTGGACCTGCAGATACGCGAGCTGCTGGAAACCGTGGTTTCGGCGCGC
TACAAGGTGATTCCGCTGCACTCTCCGCGGCCGTCCTTCCACATCGGCCGCCTGGAAAGCGACCGCTTGCTGGAGAACGT
GGATTTCTACCTGTCGGTGCAGAGCGACCAGCCCGCCAGCTACGTCATCGACAACGTGCCGCTCAAACTCAAGATCGGCG
CGCCGGACGACGTGGAGCGCATCCTCAACTCGGCGATGCGCGGCGTCAGCCTGGCGCACTCGGCCCAGACGCCGTCCGCC
ATCCCGGTGCGGGTGGGCAACCACTACTTCGCGCTGGAACCGGGCAGCGAGATCTACAGCCGCATGCTGCAATCGCGCAG
CGTCTGCATCTACATCCCGCAAACCCTGGCCAATATTTCGATAGAACTGATCGCGGTCTTCCGCTGA

Upstream 100 bases:

>100_bases
CTGCCCGACCAGCCCAAGAGCGGCGCGGTCGAGTGTCCGGCTTCGCGCAACTGAACCACGCGGCCCGCCGCGATCAACCC
ACTCCGAGGTTCGAGCAGTA

Downstream 100 bases:

>100_bases
GCACACCATGAACCAAGCAAGCACCCAAACCCCCGAACGCGCGATCACCGTCTCCGCTCCGGCGGCGCCGGCCATGCGCG
AGATGCTGGAAGACGGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MLQAQRILWGEGMFLRPQHFQQHALFQEQTQASLLHLTHRHAWGVQRLALDEAALKGGIVRVDELTLLFRDGTLLQAPSH
APLPLSRDLASMPQVGVKTTLYACLAQLQPYGGNTRNGEASARPTRFHSDHREVSDLYTQALAADLSTLQLDVKLMLEEE
NRDGHDAIPLCQLEKDATGQWGVGREFLPPLLAIEGSTELMQMLRRLLDILLVKSQSLAGAHRERAKSVMEFGSADISSF
WLLHTVNRNFARLRHLSQSQPLHPEELYMALSEFCGELQTFTTLYTLSDIPAYRHDGLHEVFPPLDLQIRELLETVVSAR
YKVIPLHSPRPSFHIGRLESDRLLENVDFYLSVQSDQPASYVIDNVPLKLKIGAPDDVERILNSAMRGVSLAHSAQTPSA
IPVRVGNHYFALEPGSEIYSRMLQSRSVCIYIPQTLANISIELIAVFR

Sequences:

>Translated_448_residues
MLQAQRILWGEGMFLRPQHFQQHALFQEQTQASLLHLTHRHAWGVQRLALDEAALKGGIVRVDELTLLFRDGTLLQAPSH
APLPLSRDLASMPQVGVKTTLYACLAQLQPYGGNTRNGEASARPTRFHSDHREVSDLYTQALAADLSTLQLDVKLMLEEE
NRDGHDAIPLCQLEKDATGQWGVGREFLPPLLAIEGSTELMQMLRRLLDILLVKSQSLAGAHRERAKSVMEFGSADISSF
WLLHTVNRNFARLRHLSQSQPLHPEELYMALSEFCGELQTFTTLYTLSDIPAYRHDGLHEVFPPLDLQIRELLETVVSAR
YKVIPLHSPRPSFHIGRLESDRLLENVDFYLSVQSDQPASYVIDNVPLKLKIGAPDDVERILNSAMRGVSLAHSAQTPSA
IPVRVGNHYFALEPGSEIYSRMLQSRSVCIYIPQTLANISIELIAVFR
>Mature_448_residues
MLQAQRILWGEGMFLRPQHFQQHALFQEQTQASLLHLTHRHAWGVQRLALDEAALKGGIVRVDELTLLFRDGTLLQAPSH
APLPLSRDLASMPQVGVKTTLYACLAQLQPYGGNTRNGEASARPTRFHSDHREVSDLYTQALAADLSTLQLDVKLMLEEE
NRDGHDAIPLCQLEKDATGQWGVGREFLPPLLAIEGSTELMQMLRRLLDILLVKSQSLAGAHRERAKSVMEFGSADISSF
WLLHTVNRNFARLRHLSQSQPLHPEELYMALSEFCGELQTFTTLYTLSDIPAYRHDGLHEVFPPLDLQIRELLETVVSAR
YKVIPLHSPRPSFHIGRLESDRLLENVDFYLSVQSDQPASYVIDNVPLKLKIGAPDDVERILNSAMRGVSLAHSAQTPSA
IPVRVGNHYFALEPGSEIYSRMLQSRSVCIYIPQTLANISIELIAVFR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50367; Mature: 50367

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQAQRILWGEGMFLRPQHFQQHALFQEQTQASLLHLTHRHAWGVQRLALDEAALKGGIV
CCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
RVDELTLLFRDGTLLQAPSHAPLPLSRDLASMPQVGVKTTLYACLAQLQPYGGNTRNGEA
EEEEEEEEEECCCEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SARPTRFHSDHREVSDLYTQALAADLSTLQLDVKLMLEEENRDGHDAIPLCQLEKDATGQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCC
WGVGREFLPPLLAIEGSTELMQMLRRLLDILLVKSQSLAGAHRERAKSVMEFGSADISSF
CCCCHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
WLLHTVNRNFARLRHLSQSQPLHPEELYMALSEFCGELQTFTTLYTLSDIPAYRHDGLHE
HHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHH
VFPPLDLQIRELLETVVSARYKVIPLHSPRPSFHIGRLESDRLLENVDFYLSVQSDQPAS
HCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCCHHHHHHCCCEEEEECCCCCHH
YVIDNVPLKLKIGAPDDVERILNSAMRGVSLAHSAQTPSAIPVRVGNHYFALEPGSEIYS
HEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCHHHHH
RMLQSRSVCIYIPQTLANISIELIAVFR
HHHHCCCEEEEECHHHHCCEEEEEEEEC
>Mature Secondary Structure
MLQAQRILWGEGMFLRPQHFQQHALFQEQTQASLLHLTHRHAWGVQRLALDEAALKGGIV
CCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
RVDELTLLFRDGTLLQAPSHAPLPLSRDLASMPQVGVKTTLYACLAQLQPYGGNTRNGEA
EEEEEEEEEECCCEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SARPTRFHSDHREVSDLYTQALAADLSTLQLDVKLMLEEENRDGHDAIPLCQLEKDATGQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCC
WGVGREFLPPLLAIEGSTELMQMLRRLLDILLVKSQSLAGAHRERAKSVMEFGSADISSF
CCCCHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
WLLHTVNRNFARLRHLSQSQPLHPEELYMALSEFCGELQTFTTLYTLSDIPAYRHDGLHE
HHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHH
VFPPLDLQIRELLETVVSARYKVIPLHSPRPSFHIGRLESDRLLENVDFYLSVQSDQPAS
HCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCEECCCCHHHHHHCCCEEEEECCCCCHH
YVIDNVPLKLKIGAPDDVERILNSAMRGVSLAHSAQTPSAIPVRVGNHYFALEPGSEIYS
HEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCHHHHH
RMLQSRSVCIYIPQTLANISIELIAVFR
HHHHCCCEEEEECHHHHCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA