| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499436
Identifier: 34499436
GI number: 34499436
Start: 4308545
End: 4309402
Strand: Reverse
Name: 34499436
Synonym: CV_3981
Alternate gene names: NA
Gene position: 4309402-4308545 (Counterclockwise)
Preceding gene: 34499447
Following gene: 34499435
Centisome position: 90.7
GC content: 65.15
Gene sequence:
>858_bases ATGACGTTTCTAGTGCCGCTGATTGTGGCTGCTATCGTCCTCTTATTGCTGTGGCTCGGCTGGCGGTTTTTCCTCGGCGG AGCCCGGCTGCAGGTGGAACAGGCGACAATCGCTACCTCAACGAACCTCGCATGCGAGCCGGTGGATATCCCGGCGGCCG ACGAGCCTCCTGCGCGCCGGTTTGTGCGCGGAGCGGCGGTGTTTGGCTGGGTGAGGACGCGGCCCGTCGGTTTGTTGCTG CCCCTGTTGACGCTGCCGCTGGTCGCGGCAGTTGTGGCAATAACGTTGCACTTTGGCGGGTATCACAAGGACCCGCAGTT CGTGCCCGGAGAGTACGCGCACGGCAACCAGATTCGTCAGGCGCTGCTGGAGGAGAAGCTGGTGCCGCCGCCGCCGCTGC CGCCCAGCGCTTTTGTCGACGCCGTGGCGGAAAAGCCGCAATTGGCGCTGGATAAGGCCGACCGGGACTGGAGCCGGATG GATCAGGCCTTTGTCCAGGATGTGCTGAGGGTGATGGAAAAGATGAAGGCGCGGGGCTTCCCGATGGTGCTGCTTGAGGG GTACCGCAGCGCCGAGCGCCAGAACAAGCTGGCTGGCGGCAGCGTCAAGGTGACGCAGGCCAAGGGGGGCGAGAGCAAGC ACCAGTACGGCCTGGCGGCGGATCTGGCGCCTGTGCGCAATGGCAAGGTGGTGATTTCGGAGCGCGATCCCTGGGCGATG CAGGCTTACAACGCGCTCGGAGAGGAGGCGCAGGCGGCCGGGCTGACCTGGGGCGGCGTCTGGAGCTTCCGCGATTACGG CCACATCGAACGCGCAGGCTCGTTGCGCGCACTGTTGGCGCAGCGCAACAAAAAATGA
Upstream 100 bases:
>100_bases TCTGCTTTTGAAAGGGTACTTGACTTCTTTGCAAATCAAATCAAGCATATCGCGTATTTTGTCGGTTCATCAATCGTTTG TTTTTTTATAAAAAATCCCA
Downstream 100 bases:
>100_bases TTACAGTTCTTAAGGGAAGGTAAATTCGGTGTTACACAAAGGTTGGCTACGCAATGCCAAGGTGGCGTCTGCCATCGGAT TCTTGATCCTGATCGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase Family; Transmembrane Protein; Subfamily; D-Alanyl-D-Alanine Carboxypeptidase Family Protein
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTFLVPLIVAAIVLLLLWLGWRFFLGGARLQVEQATIATSTNLACEPVDIPAADEPPARRFVRGAAVFGWVRTRPVGLLL PLLTLPLVAAVVAITLHFGGYHKDPQFVPGEYAHGNQIRQALLEEKLVPPPPLPPSAFVDAVAEKPQLALDKADRDWSRM DQAFVQDVLRVMEKMKARGFPMVLLEGYRSAERQNKLAGGSVKVTQAKGGESKHQYGLAADLAPVRNGKVVISERDPWAM QAYNALGEEAQAAGLTWGGVWSFRDYGHIERAGSLRALLAQRNKK
Sequences:
>Translated_285_residues MTFLVPLIVAAIVLLLLWLGWRFFLGGARLQVEQATIATSTNLACEPVDIPAADEPPARRFVRGAAVFGWVRTRPVGLLL PLLTLPLVAAVVAITLHFGGYHKDPQFVPGEYAHGNQIRQALLEEKLVPPPPLPPSAFVDAVAEKPQLALDKADRDWSRM DQAFVQDVLRVMEKMKARGFPMVLLEGYRSAERQNKLAGGSVKVTQAKGGESKHQYGLAADLAPVRNGKVVISERDPWAM QAYNALGEEAQAAGLTWGGVWSFRDYGHIERAGSLRALLAQRNKK >Mature_284_residues TFLVPLIVAAIVLLLLWLGWRFFLGGARLQVEQATIATSTNLACEPVDIPAADEPPARRFVRGAAVFGWVRTRPVGLLLP LLTLPLVAAVVAITLHFGGYHKDPQFVPGEYAHGNQIRQALLEEKLVPPPPLPPSAFVDAVAEKPQLALDKADRDWSRMD QAFVQDVLRVMEKMKARGFPMVLLEGYRSAERQNKLAGGSVKVTQAKGGESKHQYGLAADLAPVRNGKVVISERDPWAMQ AYNALGEEAQAAGLTWGGVWSFRDYGHIERAGSLRALLAQRNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31232; Mature: 31100
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLVPLIVAAIVLLLLWLGWRFFLGGARLQVEQATIATSTNLACEPVDIPAADEPPARR CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHEEECCCCCCCCCCCCCCCCCHHHH FVRGAAVFGWVRTRPVGLLLPLLTLPLVAAVVAITLHFGGYHKDPQFVPGEYAHGNQIRQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH ALLEEKLVPPPPLPPSAFVDAVAEKPQLALDKADRDWSRMDQAFVQDVLRVMEKMKARGF HHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PMVLLEGYRSAERQNKLAGGSVKVTQAKGGESKHQYGLAADLAPVRNGKVVISERDPWAM CEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCHHHCCCCCCCEEEEECCCCHHH QAYNALGEEAQAAGLTWGGVWSFRDYGHIERAGSLRALLAQRNKK HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TFLVPLIVAAIVLLLLWLGWRFFLGGARLQVEQATIATSTNLACEPVDIPAADEPPARR CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHEEECCCCCCCCCCCCCCCCCHHHH FVRGAAVFGWVRTRPVGLLLPLLTLPLVAAVVAITLHFGGYHKDPQFVPGEYAHGNQIRQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH ALLEEKLVPPPPLPPSAFVDAVAEKPQLALDKADRDWSRMDQAFVQDVLRVMEKMKARGF HHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PMVLLEGYRSAERQNKLAGGSVKVTQAKGGESKHQYGLAADLAPVRNGKVVISERDPWAM CEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCHHHCCCCCCCEEEEECCCCHHH QAYNALGEEAQAAGLTWGGVWSFRDYGHIERAGSLRALLAQRNKK HHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA