| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499427
Identifier: 34499427
GI number: 34499427
Start: 4295951
End: 4296499
Strand: Reverse
Name: 34499427
Synonym: CV_3972
Alternate gene names: NA
Gene position: 4296499-4295951 (Counterclockwise)
Preceding gene: 34499428
Following gene: 34499426
Centisome position: 90.43
GC content: 56.28
Gene sequence:
>549_bases ATGTGGCGTAAATGGTGGATGTTGCCGCTGCTGGCGGTGTTGGCGGCTTGCCAAAGCATGGGCGAGCCCAAAATGATGGG GGGGGCGGGGCGAGTGATCAATACCGATAATCAAACTAGTATTGTCTGGGCGAAATTCAATGGCCAAGGCATCGCCGGCA GCGGCGGCGATGATTGCTGCATTGAATATCCCGCGAAATGGCAGCCGGGGATGACGGCGACAGTTGAGTGGATGAAGGAT CCTCGGGTCGGCCTGAATGCTGACGGTTCAAAGCGTCCTCGAGGTAACCTAAATGGCTCGTTGTCGGAGGCCGAGAAAGT ATGGGTAAAGGCGCATGAGGCCCAATACACCCGTCACGCCGCGATTGTATCGGTGCCCCAATATAACAAGACCTGCGGTG TGACGTTGATCTTCCTGCCTTGCGATGAGGCCAGGGTGATTATCGATTGCAAACAGTACTTCGATGTGATCCAGACCTTG CCGGGGGGAGCGCGCCGCTATCCGGAGCTGATTCGCCGTTTGGGAGGTCAGCAGACATGTCGAAAGTAA
Upstream 100 bases:
>100_bases TCCGGAATTGATCCGCCGTTTAGGCGGCAAGACGCAATGCGTTGCCGGCGTTTGAGACGCAAGCCAATGATTGAATGAAA TATGAATAAGGGGAATAGGT
Downstream 100 bases:
>100_bases GCCTGGCTCCCGCCTTTCCGGAGCGTGGCCACTGGCCGAGCGACTTGAATGAGGTGATCAAGCAGCGTTATGCGCAGCAG CGGGAAATCGCCGCGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MWRKWWMLPLLAVLAACQSMGEPKMMGGAGRVINTDNQTSIVWAKFNGQGIAGSGGDDCCIEYPAKWQPGMTATVEWMKD PRVGLNADGSKRPRGNLNGSLSEAEKVWVKAHEAQYTRHAAIVSVPQYNKTCGVTLIFLPCDEARVIIDCKQYFDVIQTL PGGARRYPELIRRLGGQQTCRK
Sequences:
>Translated_182_residues MWRKWWMLPLLAVLAACQSMGEPKMMGGAGRVINTDNQTSIVWAKFNGQGIAGSGGDDCCIEYPAKWQPGMTATVEWMKD PRVGLNADGSKRPRGNLNGSLSEAEKVWVKAHEAQYTRHAAIVSVPQYNKTCGVTLIFLPCDEARVIIDCKQYFDVIQTL PGGARRYPELIRRLGGQQTCRK >Mature_182_residues MWRKWWMLPLLAVLAACQSMGEPKMMGGAGRVINTDNQTSIVWAKFNGQGIAGSGGDDCCIEYPAKWQPGMTATVEWMKD PRVGLNADGSKRPRGNLNGSLSEAEKVWVKAHEAQYTRHAAIVSVPQYNKTCGVTLIFLPCDEARVIIDCKQYFDVIQTL PGGARRYPELIRRLGGQQTCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20203; Mature: 20203
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRKWWMLPLLAVLAACQSMGEPKMMGGAGRVINTDNQTSIVWAKFNGQGIAGSGGDDCC CCCHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCCEE IEYPAKWQPGMTATVEWMKDPRVGLNADGSKRPRGNLNGSLSEAEKVWVKAHEAQYTRHA EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCE AIVSVPQYNKTCGVTLIFLPCDEARVIIDCKQYFDVIQTLPGGARRYPELIRRLGGQQTC EEEECCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC RK CC >Mature Secondary Structure MWRKWWMLPLLAVLAACQSMGEPKMMGGAGRVINTDNQTSIVWAKFNGQGIAGSGGDDCC CCCHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCCEE IEYPAKWQPGMTATVEWMKDPRVGLNADGSKRPRGNLNGSLSEAEKVWVKAHEAQYTRHA EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCE AIVSVPQYNKTCGVTLIFLPCDEARVIIDCKQYFDVIQTLPGGARRYPELIRRLGGQQTC EEEECCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC RK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA