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The map label for this gene is 34499424

Identifier: 34499424

GI number: 34499424

Start: 4291222

End: 4293081

Strand: Reverse

Name: 34499424

Synonym: CV_3969

Alternate gene names: NA

Gene position: 4293081-4291222 (Counterclockwise)

Preceding gene: 34499425

Following gene: 34499423

Centisome position: 90.36

GC content: 66.45

Gene sequence:

>1860_bases
ATGCTTGAATCCTTACTACCGTATTACGAACGCGAACTCGGCCACCTGCGGGAGCTGTCGGGCGAGTTCGCGCGCCGCTA
TCCGAAGATCGCCGGCCGGCTGCAGATGGAAGGCGACCAGTGCGCCGACCCGCACACCGAACGGCTGATCGAAGCGTTCG
CGCTGCTGGCTTCGCGCATCCACAAAAAGCTGGACGACGATTATCCCGAGGTGGCGGAAAGCTTCCTGGATGTGCTGTAT
CCGCATTATCTGCAGCCGATTCCGTCGGCCACCATCGTCCAGTTCGAGTGCGATCCGGCGCGGCCGGAGATCGCCAAGCG
CTACCGCGTGGAGCGCGGCCAGCCGGTGCATGCGCCGGCGATCAACGGCGTGGTGTGCAAATTCCGCAGCGCCTACCCGG
TGGACCTGTATCCGCTGTCGCTGAATAGCGCCAAGCTGGAGCTGACCAGCGGCTCGCCCTATCTGCGCCAGTTGGCGCCG
GACGCGGCGGCGCTGCTGACGATGGAGTTCCAGACCCACGGCGGCCTGGCCTTGAACAGCATAGGGCTGACTTCGCTGCG
CTTCTTCCTGGACGGCGAGCCGGCGCTGATGCACCTGCTGTACGAGCTCCTGCTGTCCCAGGTGCTGCGCATCCGCGTCG
GCGATGGCAGCGAGGACCCGTCGCGCAGCGCGGTGCTGCCGGCCTCGGCCATCCGCCCGGTGGGCTTCGGCCGCGACGAG
GGCATGCTGGAGTACGACGAGCGCTCGTTCATGGGCTACCGGCTGCTGACCGAATATTTCTGCTATCCGGACAAGTTCCT
GTTCGTCGACATCGCCGAGCTGGACAAGGCCGCGGTGCGCCTGGATGGCGGCAAGCTGGTGCTGCAGCTGGTGCTGGGCG
ACTACCCGGACAGCGAGCGCCATCACCGGCTGTTGACCCAATTGCAAGCCCATCATCTGAAGCTGGGCTGCGCCCCCATC
GTCAACCTGTTCAACCAGCCCGGCGAGCCCATCCGCGTCAGCCACCAGAAGGCCGGCTACGCGGTGCTGGCCGACGGCCG
CAAGCAGCAGGCTTACGAAGTGATCCAGATCCGCCGCGTGGTGCGGGTGGAGAAGTCCGGCGAGGGCGAAAGCAGCGAGG
AGGTGCCGCCGTTCTATGCCACGCGCCACGGCAGCGAGCGCCAGACGCCGCGCTTCTACTGGCACGCCAGCCGCGAAGGC
TCGCCGCGAGCCGGTGACAAGGGAACGGACCTGGAACTGCATCTGGTGGATCTGCAGTTCAACGCGGTGCGGCCGGCGGC
CGAGGTGCTGAGCCTGGACTTGCTGTGCAGCAACCGCGACCTGCCGGAGCAGATTCCCTTCGGCGGCAGCCAGGCGGCGC
AGCGCACCGATTTCAGCCTGCCCGGCCATTCGGTGGTGAAGCGGGTGAGGCTGCTGCGCAAGCCGTCGGCCACCCAGCGC
AGCCCTTTGGGCCGCGCGGTGCAGTGGCGGCTGATCTCGCATCTGTCGCTGAACTACATGTCCATCGTCGATTCCGGCGT
GGCGGCGCTGCAGGAGATGCTGGCGCTGTACAACCTCACTGGTTCGCCGGTCAACGTGCGCCAGATCCAGGGCGTGGTGG
GCATAGACAGCAAGCCGGCGGTGACGCGCGTCAGCGGCCGCGATTTCGCCGGCTTCGTCCGCGGCAGCGAAATCAGGCTG
AAACTGGACGCCGATTACTATGTCGGCGGCAGCGTCTACTTGTTCGCCTCGGTGCTGGAACGCTTCTTCGCTTTGTACTG
CGCGCCCAACAGCTTCACCCGGTTGCGGGTGGAGACGACGCAGCAGGACCAGGAGGTGGCGGTATGGCCGGCGCGGGCGG
GCGAGGCTTTGGTGATATGA

Upstream 100 bases:

>100_bases
CCCTTGTCGTGCTGAGCAACACCCATTGGCGTTGAGTGCATGCATAGCTATTGATTTGGAATTGGCAGGCGATTGATATA
ACTATTTTACTTGAGCCTTC

Downstream 100 bases:

>100_bases
GGGCACGATGGAATGGATGGTGATCGCCGTGCTGGTGCCTAGTATCGTCCAGCTATGCCATTTCTCCTTTTTTCATGACA
ACGTGGCGGAAGAAAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MLESLLPYYERELGHLRELSGEFARRYPKIAGRLQMEGDQCADPHTERLIEAFALLASRIHKKLDDDYPEVAESFLDVLY
PHYLQPIPSATIVQFECDPARPEIAKRYRVERGQPVHAPAINGVVCKFRSAYPVDLYPLSLNSAKLELTSGSPYLRQLAP
DAAALLTMEFQTHGGLALNSIGLTSLRFFLDGEPALMHLLYELLLSQVLRIRVGDGSEDPSRSAVLPASAIRPVGFGRDE
GMLEYDERSFMGYRLLTEYFCYPDKFLFVDIAELDKAAVRLDGGKLVLQLVLGDYPDSERHHRLLTQLQAHHLKLGCAPI
VNLFNQPGEPIRVSHQKAGYAVLADGRKQQAYEVIQIRRVVRVEKSGEGESSEEVPPFYATRHGSERQTPRFYWHASREG
SPRAGDKGTDLELHLVDLQFNAVRPAAEVLSLDLLCSNRDLPEQIPFGGSQAAQRTDFSLPGHSVVKRVRLLRKPSATQR
SPLGRAVQWRLISHLSLNYMSIVDSGVAALQEMLALYNLTGSPVNVRQIQGVVGIDSKPAVTRVSGRDFAGFVRGSEIRL
KLDADYYVGGSVYLFASVLERFFALYCAPNSFTRLRVETTQQDQEVAVWPARAGEALVI

Sequences:

>Translated_619_residues
MLESLLPYYERELGHLRELSGEFARRYPKIAGRLQMEGDQCADPHTERLIEAFALLASRIHKKLDDDYPEVAESFLDVLY
PHYLQPIPSATIVQFECDPARPEIAKRYRVERGQPVHAPAINGVVCKFRSAYPVDLYPLSLNSAKLELTSGSPYLRQLAP
DAAALLTMEFQTHGGLALNSIGLTSLRFFLDGEPALMHLLYELLLSQVLRIRVGDGSEDPSRSAVLPASAIRPVGFGRDE
GMLEYDERSFMGYRLLTEYFCYPDKFLFVDIAELDKAAVRLDGGKLVLQLVLGDYPDSERHHRLLTQLQAHHLKLGCAPI
VNLFNQPGEPIRVSHQKAGYAVLADGRKQQAYEVIQIRRVVRVEKSGEGESSEEVPPFYATRHGSERQTPRFYWHASREG
SPRAGDKGTDLELHLVDLQFNAVRPAAEVLSLDLLCSNRDLPEQIPFGGSQAAQRTDFSLPGHSVVKRVRLLRKPSATQR
SPLGRAVQWRLISHLSLNYMSIVDSGVAALQEMLALYNLTGSPVNVRQIQGVVGIDSKPAVTRVSGRDFAGFVRGSEIRL
KLDADYYVGGSVYLFASVLERFFALYCAPNSFTRLRVETTQQDQEVAVWPARAGEALVI
>Mature_619_residues
MLESLLPYYERELGHLRELSGEFARRYPKIAGRLQMEGDQCADPHTERLIEAFALLASRIHKKLDDDYPEVAESFLDVLY
PHYLQPIPSATIVQFECDPARPEIAKRYRVERGQPVHAPAINGVVCKFRSAYPVDLYPLSLNSAKLELTSGSPYLRQLAP
DAAALLTMEFQTHGGLALNSIGLTSLRFFLDGEPALMHLLYELLLSQVLRIRVGDGSEDPSRSAVLPASAIRPVGFGRDE
GMLEYDERSFMGYRLLTEYFCYPDKFLFVDIAELDKAAVRLDGGKLVLQLVLGDYPDSERHHRLLTQLQAHHLKLGCAPI
VNLFNQPGEPIRVSHQKAGYAVLADGRKQQAYEVIQIRRVVRVEKSGEGESSEEVPPFYATRHGSERQTPRFYWHASREG
SPRAGDKGTDLELHLVDLQFNAVRPAAEVLSLDLLCSNRDLPEQIPFGGSQAAQRTDFSLPGHSVVKRVRLLRKPSATQR
SPLGRAVQWRLISHLSLNYMSIVDSGVAALQEMLALYNLTGSPVNVRQIQGVVGIDSKPAVTRVSGRDFAGFVRGSEIRL
KLDADYYVGGSVYLFASVLERFFALYCAPNSFTRLRVETTQQDQEVAVWPARAGEALVI

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69186; Mature: 69186

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESLLPYYERELGHLRELSGEFARRYPKIAGRLQMEGDQCADPHTERLIEAFALLASRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHH
HKKLDDDYPEVAESFLDVLYPHYLQPIPSATIVQFECDPARPEIAKRYRVERGQPVHAPA
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
INGVVCKFRSAYPVDLYPLSLNSAKLELTSGSPYLRQLAPDAAALLTMEFQTHGGLALNS
CCCEEEEECCCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCEEEEEEEEECCCCEEEEC
IGLTSLRFFLDGEPALMHLLYELLLSQVLRIRVGDGSEDPSRSAVLPASAIRPVGFGRDE
CCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEECCHHHCCCCCCCCCC
GMLEYDERSFMGYRLLTEYFCYPDKFLFVDIAELDKAAVRLDGGKLVLQLVLGDYPDSER
CCEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCEEECCCCEEEEEECCCCCCCHH
HHRLLTQLQAHHLKLGCAPIVNLFNQPGEPIRVSHQKAGYAVLADGRKQQAYEVIQIRRV
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHH
VRVEKSGEGESSEEVPPFYATRHGSERQTPRFYWHASREGSPRAGDKGTDLELHLVDLQF
HHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEE
NAVRPAAEVLSLDLLCSNRDLPEQIPFGGSQAAQRTDFSLPGHSVVKRVRLLRKPSATQR
CCCCHHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
SPLGRAVQWRLISHLSLNYMSIVDSGVAALQEMLALYNLTGSPVNVRQIQGVVGIDSKPA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEECCCCCCC
VTRVSGRDFAGFVRGSEIRLKLDADYYVGGSVYLFASVLERFFALYCAPNSFTRLRVETT
EEEECCCCCCCEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
QQDQEVAVWPARAGEALVI
CCCCEEEEEECCCCCEEEC
>Mature Secondary Structure
MLESLLPYYERELGHLRELSGEFARRYPKIAGRLQMEGDQCADPHTERLIEAFALLASRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHH
HKKLDDDYPEVAESFLDVLYPHYLQPIPSATIVQFECDPARPEIAKRYRVERGQPVHAPA
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
INGVVCKFRSAYPVDLYPLSLNSAKLELTSGSPYLRQLAPDAAALLTMEFQTHGGLALNS
CCCEEEEECCCCCCEEEEEECCCEEEEEECCCHHHHHHCCCCEEEEEEEEECCCCEEEEC
IGLTSLRFFLDGEPALMHLLYELLLSQVLRIRVGDGSEDPSRSAVLPASAIRPVGFGRDE
CCCEEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEECCHHHCCCCCCCCCC
GMLEYDERSFMGYRLLTEYFCYPDKFLFVDIAELDKAAVRLDGGKLVLQLVLGDYPDSER
CCEEECCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCEEECCCCEEEEEECCCCCCCHH
HHRLLTQLQAHHLKLGCAPIVNLFNQPGEPIRVSHQKAGYAVLADGRKQQAYEVIQIRRV
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHH
VRVEKSGEGESSEEVPPFYATRHGSERQTPRFYWHASREGSPRAGDKGTDLELHLVDLQF
HHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEE
NAVRPAAEVLSLDLLCSNRDLPEQIPFGGSQAAQRTDFSLPGHSVVKRVRLLRKPSATQR
CCCCHHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
SPLGRAVQWRLISHLSLNYMSIVDSGVAALQEMLALYNLTGSPVNVRQIQGVVGIDSKPA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEECCCCCCC
VTRVSGRDFAGFVRGSEIRLKLDADYYVGGSVYLFASVLERFFALYCAPNSFTRLRVETT
EEEECCCCCCCEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
QQDQEVAVWPARAGEALVI
CCCCEEEEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA