Click here to switch to the map view.

The map label for this gene is 34499422

Identifier: 34499422

GI number: 34499422

Start: 4289891

End: 4290934

Strand: Reverse

Name: 34499422

Synonym: CV_3967

Alternate gene names: NA

Gene position: 4290934-4289891 (Counterclockwise)

Preceding gene: 34499423

Following gene: 34499421

Centisome position: 90.31

GC content: 69.54

Gene sequence:

>1044_bases
ATGCAGATGAGCGATGCTGAGTTGGCTGTTACGGCATCGTCGCGGCAGCCCCGCGACCTGCGGCACGAGCTCGCGGCCGA
TGCCAGCCAGTTCGGTTTCTTCCAGGCCGCGCGCATACTCGGCTTGTCCGGCGCGCGCCGGCCGGGCGCGCGGCGCGGGC
GTTTGCCGGAGCGGCTGCGTTTTCGCACGCTGGCGTCCCTTTCCTTCCCGGCCAGCGAGCTGACCGGCTACAAGCCGGGA
ACGGAAGAGGGCGACGCGGCGGACGAGATGACGATCAGCTTCCTCGGCCTGACCGGGCCGAGCGGCGCGCTGCCCACCGC
CTATACCGAGCTGCTGCTGGAGCGCCGCCTGCGCCACCGCGACGACACCATGCACGCCTTCTTCGACCTGTTCAGCCACC
GCGCCGCGTCGCTGTTCTTCGAGGCCTGGTGCAAGTACCGCAGCTGGATCCATGTCGAGGCGGGCGAGCGGAATGGCTTC
ACCCGCAACCTGCTGGATCTGGGCGGCGTCGGCCTATCCCAGCTGCGCCAGCAGATGGGGCCGGGCGCGGAGCTGGACGA
GCGGATGTTCGTCTACTACGCCGGCCTGCTCAGCCAGAAGCCGCTGTCGGCGCAGTCGCTGCTGACGCTGGTGGAAGGGT
TCTTCGGCGTCGACGCCACTTTGGAGCAGTTTGTCGGCCAATGGCTGCAGGTGCCCGAGGGCGAGCAGAGCCAGTTGGGC
ATGGATGGCTGCGAGTTGGGATTGTCGGCCTTCGCCGGCGAGCGCATCTGGGACCGCCAGACCAAGCTCAAGCTGCGGCT
GGGGCCTTTGCGCCGAGAGCAGTTCAACGCGCTGCAGCCGCACGCCGCCGGCGCCCAGGCGCTGCGCGCGCTGATGAAGT
TCGCGCTGGGCCACGGCCTGGCCGCCGAAGTATGCCTGGTGCTGGACCAGCGCGACGTGCAGCCGGCGGTGCTGGGGTCG
GCCACGCTGAGCCTGGGGGGAGACAGCTGGATGGGCCGGCCGGCGGGACACCCCGACGATATGCGTTACACCTTGCTGGA
CTGA

Upstream 100 bases:

>100_bases
GAGACGCTGTTGGTTTCGCTGGCTCTTGTGCCGGGAGGAGCGCTGGGTTTGATGACCGGGCTGTTCTTCGGCGCGTGGGC
ACGCAGGAAAAGGGTAAAGG

Downstream 100 bases:

>100_bases
AACGGGAAACAGAAGCCATGGGCATACTCAAGCGATTGATGGGGCGTGGGAAGGCGGCGCAACTGAGCGTCAGTCACGGA
GAGACGCCGCCAGAGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Quinoprotein Dehydrogenase; Conserved Protein; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MQMSDAELAVTASSRQPRDLRHELAADASQFGFFQAARILGLSGARRPGARRGRLPERLRFRTLASLSFPASELTGYKPG
TEEGDAADEMTISFLGLTGPSGALPTAYTELLLERRLRHRDDTMHAFFDLFSHRAASLFFEAWCKYRSWIHVEAGERNGF
TRNLLDLGGVGLSQLRQQMGPGAELDERMFVYYAGLLSQKPLSAQSLLTLVEGFFGVDATLEQFVGQWLQVPEGEQSQLG
MDGCELGLSAFAGERIWDRQTKLKLRLGPLRREQFNALQPHAAGAQALRALMKFALGHGLAAEVCLVLDQRDVQPAVLGS
ATLSLGGDSWMGRPAGHPDDMRYTLLD

Sequences:

>Translated_347_residues
MQMSDAELAVTASSRQPRDLRHELAADASQFGFFQAARILGLSGARRPGARRGRLPERLRFRTLASLSFPASELTGYKPG
TEEGDAADEMTISFLGLTGPSGALPTAYTELLLERRLRHRDDTMHAFFDLFSHRAASLFFEAWCKYRSWIHVEAGERNGF
TRNLLDLGGVGLSQLRQQMGPGAELDERMFVYYAGLLSQKPLSAQSLLTLVEGFFGVDATLEQFVGQWLQVPEGEQSQLG
MDGCELGLSAFAGERIWDRQTKLKLRLGPLRREQFNALQPHAAGAQALRALMKFALGHGLAAEVCLVLDQRDVQPAVLGS
ATLSLGGDSWMGRPAGHPDDMRYTLLD
>Mature_347_residues
MQMSDAELAVTASSRQPRDLRHELAADASQFGFFQAARILGLSGARRPGARRGRLPERLRFRTLASLSFPASELTGYKPG
TEEGDAADEMTISFLGLTGPSGALPTAYTELLLERRLRHRDDTMHAFFDLFSHRAASLFFEAWCKYRSWIHVEAGERNGF
TRNLLDLGGVGLSQLRQQMGPGAELDERMFVYYAGLLSQKPLSAQSLLTLVEGFFGVDATLEQFVGQWLQVPEGEQSQLG
MDGCELGLSAFAGERIWDRQTKLKLRLGPLRREQFNALQPHAAGAQALRALMKFALGHGLAAEVCLVLDQRDVQPAVLGS
ATLSLGGDSWMGRPAGHPDDMRYTLLD

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38228; Mature: 38228

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMSDAELAVTASSRQPRDLRHELAADASQFGFFQAARILGLSGARRPGARRGRLPERLR
CCCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
FRTLASLSFPASELTGYKPGTEEGDAADEMTISFLGLTGPSGALPTAYTELLLERRLRHR
HHHHHHCCCCHHHHCCCCCCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
DDTMHAFFDLFSHRAASLFFEAWCKYRSWIHVEAGERNGFTRNLLDLGGVGLSQLRQQMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHC
PGAELDERMFVYYAGLLSQKPLSAQSLLTLVEGFFGVDATLEQFVGQWLQVPEGEQSQLG
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCC
MDGCELGLSAFAGERIWDRQTKLKLRLGPLRREQFNALQPHAAGAQALRALMKFALGHGL
CCHHHHHHHHHHCCHHHHHHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCH
AAEVCLVLDQRDVQPAVLGSATLSLGGDSWMGRPAGHPDDMRYTLLD
HHHHHHHHCCCCCCHHHHCCHHEECCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MQMSDAELAVTASSRQPRDLRHELAADASQFGFFQAARILGLSGARRPGARRGRLPERLR
CCCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
FRTLASLSFPASELTGYKPGTEEGDAADEMTISFLGLTGPSGALPTAYTELLLERRLRHR
HHHHHHCCCCHHHHCCCCCCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
DDTMHAFFDLFSHRAASLFFEAWCKYRSWIHVEAGERNGFTRNLLDLGGVGLSQLRQQMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHC
PGAELDERMFVYYAGLLSQKPLSAQSLLTLVEGFFGVDATLEQFVGQWLQVPEGEQSQLG
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCC
MDGCELGLSAFAGERIWDRQTKLKLRLGPLRREQFNALQPHAAGAQALRALMKFALGHGL
CCHHHHHHHHHHCCHHHHHHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCH
AAEVCLVLDQRDVQPAVLGSATLSLGGDSWMGRPAGHPDDMRYTLLD
HHHHHHHHCCCCCCHHHHCCHHEECCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA