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The map label for this gene is 34499418

Identifier: 34499418

GI number: 34499418

Start: 4283686

End: 4284771

Strand: Reverse

Name: 34499418

Synonym: CV_3963

Alternate gene names: NA

Gene position: 4284771-4283686 (Counterclockwise)

Preceding gene: 34499419

Following gene: 34499416

Centisome position: 90.19

GC content: 68.51

Gene sequence:

>1086_bases
ATGGATCAAAGCATTGAACATCTGATGCAGCCGGTGCGTCCGGATGCGCCGGCCGGGGAAGACCTGGCCTACTCCCTGAT
CTTCGACCAGATCCGCGAGGCGCGCCGCAGCGACGATCCGTCGCTGGCGATGGGCGATTGGGAACAGTCGCTGAAGACCG
CCGAATGGCCGCAAGTGATACGCCTGTGCGAAGACGCGCTGAAGAACAAGAGCAAGGATCTGCAGCTGCTGGCCTGGTAT
GCCGAGGCGCAGACCCAGGTCAACGGCGCGGGCGGCCTGGCGCGCGGCCTGGCGCTGGTGGGCGGCTGGCTGCGGGACTT
CTGGGAAAGCGGCTATCCCGAACTGGACCCGCACGATCTGGACGAGCGCGTGGCCAAGCTGGAGTGGATGAACCAGCAGC
TGGGCAACGCGCTACGCAATGTGCCGCTGATCAAGCCCGAGTTCGGCGGCTACAGCTGGCACCAGTGGCAGCAGTCGCGC
GATGTGGAGAACCTGGGCCTGAAGGACGGCGAGGCGCGCGAGGCCGCCATCGCCGAGGGCAAGCTCAGCGGCGAGGCCTT
CGAAAAGGCCGCCACCCTGTCCGGCCACGGCTGGTTCCAGGCCAAGGCCGAAGAGCTGGTGGCCTTGCTGACCGCCTACG
AGGAGCTGGATGCCTTGGTCGACCAGCGCTTCGGCCAGGCCGGCCCCAGCCTGGCCGACATCCGCAACGCCATCTACGCC
TGCCAGGACCTGGTCCTGCGCTATCGCCAGCAATTCGCCGGCAACGCGCCGGCGGCCGCGCCGCAGCGGCAGCCCGTCGA
GGAAAGCAAACCTGTGAGCCCAGCCATGAGCAGTCCGGTCCATGCCGCCGCCCCGGCTACCGCCTTCAACGGCCAGATCC
GCAGCCGCCAGGAGGCGGTGACCGCCTTGACCGAGGTGGCCCGCTACTTCCGCCACAACGAGCCGCACAGCCCGGTGGCG
CTGCTGGCCGAGCGCGCCGCGCGCTGGGCGGAGATGAGCCTGGAGGAATGGCTGCAGCACGTGGTGAAGGACAGCGGCAC
GCTGAGCCAGCTGCAGGAGCTGCTGGACGTGCGCCAGGGCGATTGA

Upstream 100 bases:

>100_bases
GGTCGGCGGCAAGGCGGTGGCGCTGGACGGCCACAAGGTCAGCTGCGGCGCCACGCTGATTTCCACGCTGCCTCAGGTCA
GCAAGGGCTAGAGAAAGAAC

Downstream 100 bases:

>100_bases
GTCGGAATGGAATAGATCGGCGATTTCCAGCGCCGGCAATAAAAAACACGCGGCAGCGATGCCGCGTGTTTTTTTATTGC
GTGCCGGTTTGCGAATGATT

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Family Type VI Secretion-Associated Protein; ImpA Domain-Containing Protein; ImpA N-Terminal; ImpA-Related N-Terminal Protein; ImpA-Like; ImpA-Like N-Terminal Family Protein; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Protein TssA; Type VI Secretion System Protein EvpK; Inner Membrane Protein; ImpA Domain Protein; ImpA-Related N-Terminal Domain-Containing; ImpA-Related Protein; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MDQSIEHLMQPVRPDAPAGEDLAYSLIFDQIREARRSDDPSLAMGDWEQSLKTAEWPQVIRLCEDALKNKSKDLQLLAWY
AEAQTQVNGAGGLARGLALVGGWLRDFWESGYPELDPHDLDERVAKLEWMNQQLGNALRNVPLIKPEFGGYSWHQWQQSR
DVENLGLKDGEAREAAIAEGKLSGEAFEKAATLSGHGWFQAKAEELVALLTAYEELDALVDQRFGQAGPSLADIRNAIYA
CQDLVLRYRQQFAGNAPAAAPQRQPVEESKPVSPAMSSPVHAAAPATAFNGQIRSRQEAVTALTEVARYFRHNEPHSPVA
LLAERAARWAEMSLEEWLQHVVKDSGTLSQLQELLDVRQGD

Sequences:

>Translated_361_residues
MDQSIEHLMQPVRPDAPAGEDLAYSLIFDQIREARRSDDPSLAMGDWEQSLKTAEWPQVIRLCEDALKNKSKDLQLLAWY
AEAQTQVNGAGGLARGLALVGGWLRDFWESGYPELDPHDLDERVAKLEWMNQQLGNALRNVPLIKPEFGGYSWHQWQQSR
DVENLGLKDGEAREAAIAEGKLSGEAFEKAATLSGHGWFQAKAEELVALLTAYEELDALVDQRFGQAGPSLADIRNAIYA
CQDLVLRYRQQFAGNAPAAAPQRQPVEESKPVSPAMSSPVHAAAPATAFNGQIRSRQEAVTALTEVARYFRHNEPHSPVA
LLAERAARWAEMSLEEWLQHVVKDSGTLSQLQELLDVRQGD
>Mature_361_residues
MDQSIEHLMQPVRPDAPAGEDLAYSLIFDQIREARRSDDPSLAMGDWEQSLKTAEWPQVIRLCEDALKNKSKDLQLLAWY
AEAQTQVNGAGGLARGLALVGGWLRDFWESGYPELDPHDLDERVAKLEWMNQQLGNALRNVPLIKPEFGGYSWHQWQQSR
DVENLGLKDGEAREAAIAEGKLSGEAFEKAATLSGHGWFQAKAEELVALLTAYEELDALVDQRFGQAGPSLADIRNAIYA
CQDLVLRYRQQFAGNAPAAAPQRQPVEESKPVSPAMSSPVHAAAPATAFNGQIRSRQEAVTALTEVARYFRHNEPHSPVA
LLAERAARWAEMSLEEWLQHVVKDSGTLSQLQELLDVRQGD

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40129; Mature: 40129

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSIEHLMQPVRPDAPAGEDLAYSLIFDQIREARRSDDPSLAMGDWEQSLKTAEWPQVI
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHH
RLCEDALKNKSKDLQLLAWYAEAQTQVNGAGGLARGLALVGGWLRDFWESGYPELDPHDL
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DERVAKLEWMNQQLGNALRNVPLIKPEFGGYSWHQWQQSRDVENLGLKDGEAREAAIAEG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHC
KLSGEAFEKAATLSGHGWFQAKAEELVALLTAYEELDALVDQRFGQAGPSLADIRNAIYA
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
CQDLVLRYRQQFAGNAPAAAPQRQPVEESKPVSPAMSSPVHAAAPATAFNGQIRSRQEAV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHCCHHHHHHHHH
TALTEVARYFRHNEPHSPVALLAERAARWAEMSLEEWLQHVVKDSGTLSQLQELLDVRQG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
D
C
>Mature Secondary Structure
MDQSIEHLMQPVRPDAPAGEDLAYSLIFDQIREARRSDDPSLAMGDWEQSLKTAEWPQVI
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHH
RLCEDALKNKSKDLQLLAWYAEAQTQVNGAGGLARGLALVGGWLRDFWESGYPELDPHDL
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DERVAKLEWMNQQLGNALRNVPLIKPEFGGYSWHQWQQSRDVENLGLKDGEAREAAIAEG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHC
KLSGEAFEKAATLSGHGWFQAKAEELVALLTAYEELDALVDQRFGQAGPSLADIRNAIYA
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
CQDLVLRYRQQFAGNAPAAAPQRQPVEESKPVSPAMSSPVHAAAPATAFNGQIRSRQEAV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCHHHCCHHHHHHHHH
TALTEVARYFRHNEPHSPVALLAERAARWAEMSLEEWLQHVVKDSGTLSQLQELLDVRQG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA