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The map label for this gene is araL [C]

Identifier: 34499412

GI number: 34499412

Start: 4277480

End: 4278247

Strand: Reverse

Name: araL [C]

Synonym: CV_3957

Alternate gene names: 34499412

Gene position: 4278247-4277480 (Counterclockwise)

Preceding gene: 34499413

Following gene: 34499411

Centisome position: 90.05

GC content: 71.88

Gene sequence:

>768_bases
ATGGCTTACGCGCCCCTGATCTTCGATCTGCACGGCGTGCTGCTGGGCCGGCGGGAGCCCGATGGCCATCTGCCGGCCGG
AGAAGTGCTGCGCCAGCTGCGCGCGGCCGGGCACCCGCTGCGCTTCCTCACCAATTCCAGCAGCGTCGAGCGGCGGCAGG
TGGTGGCGCAGCTGGCGTCGGCCGGCGTCGAGGTTGACGCCGGCGAGGTGTACACCGCGGCGATGACGGTCGCGCATTAT
CTGCGGCGCTGCGGCCGGCCGCGCAAACTGTTCGTCGTCGGCTCCGACGCGCTGCGCGCCGAACTGGACGCCATGTGCGG
CGGATTGCTGAGCTGGGCGGCGCCGGAGGAAGCGGACACCGTGGTGGCGAGCCGCGATCCGGCGCTGGACGAGGACACGC
TGCGGCGTCTGGCGCGGGCGGCGCAGCCGCAGCTGATCGCCACCTGCCGCGATCTGGGCTTTCCCGACGGCGACGGCATC
CATCCCGGCCCCGGCCAGACCGTGGCCCGCGTCGAGCAGGCGCTGGACGCCCAGGCGATGGTGCTGGGCAAGCCGAATCC
CTATGCGTTGGAGTCGGTGATGGATTTGCCGGCGCCTTTGTCCGACTGCGTGGTGATAGGCGATTCGCCGCTGCAGGACG
TCGCGCTGGCGCGCAAGGCCGGCGCGAGGGCGGTGCTGGTGGCGTCGGGCGGCGAAGCGCCGGACGGCCCGGAGCCGGAC
TGGCGCATCGACGCCATCGATCAACTGCTTCCCTTACTGTGCAGGTGA

Upstream 100 bases:

>100_bases
CTGCGGCAATTTTCCGACTACTTCGTGTCGCCGGCCTACTGGCATCGTCCGCTGGCGGCTTCGCGCCCGGCGGCGGCGCT
GCTGGCCTGAGGAGGACGCC

Downstream 100 bases:

>100_bases
CAGCATGAATATCCGCGCCTTGAGCCTAGGCACCGCCGGCTACTTCTTCACCAACCGCTTCCACATCGCGCTGATGCCGG
TGTTCCTCACCTATTTCTGG

Product: L-arabinose operon protein AraL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MAYAPLIFDLHGVLLGRREPDGHLPAGEVLRQLRAAGHPLRFLTNSSSVERRQVVAQLASAGVEVDAGEVYTAAMTVAHY
LRRCGRPRKLFVVGSDALRAELDAMCGGLLSWAAPEEADTVVASRDPALDEDTLRRLARAAQPQLIATCRDLGFPDGDGI
HPGPGQTVARVEQALDAQAMVLGKPNPYALESVMDLPAPLSDCVVIGDSPLQDVALARKAGARAVLVASGGEAPDGPEPD
WRIDAIDQLLPLLCR

Sequences:

>Translated_255_residues
MAYAPLIFDLHGVLLGRREPDGHLPAGEVLRQLRAAGHPLRFLTNSSSVERRQVVAQLASAGVEVDAGEVYTAAMTVAHY
LRRCGRPRKLFVVGSDALRAELDAMCGGLLSWAAPEEADTVVASRDPALDEDTLRRLARAAQPQLIATCRDLGFPDGDGI
HPGPGQTVARVEQALDAQAMVLGKPNPYALESVMDLPAPLSDCVVIGDSPLQDVALARKAGARAVLVASGGEAPDGPEPD
WRIDAIDQLLPLLCR
>Mature_254_residues
AYAPLIFDLHGVLLGRREPDGHLPAGEVLRQLRAAGHPLRFLTNSSSVERRQVVAQLASAGVEVDAGEVYTAAMTVAHYL
RRCGRPRKLFVVGSDALRAELDAMCGGLLSWAAPEEADTVVASRDPALDEDTLRRLARAAQPQLIATCRDLGFPDGDGIH
PGPGQTVARVEQALDAQAMVLGKPNPYALESVMDLPAPLSDCVVIGDSPLQDVALARKAGARAVLVASGGEAPDGPEPDW
RIDAIDQLLPLLCR

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI10092677, Length=244, Percent_Identity=30.7377049180328, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI108796653, Length=293, Percent_Identity=31.0580204778157, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1786890, Length=239, Percent_Identity=29.7071129707113, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562356, Length=243, Percent_Identity=27.1604938271605, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666141, Length=224, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19920940, Length=248, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 27073; Mature: 26942

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAPLIFDLHGVLLGRREPDGHLPAGEVLRQLRAAGHPLRFLTNSSSVERRQVVAQLAS
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
AGVEVDAGEVYTAAMTVAHYLRRCGRPRKLFVVGSDALRAELDAMCGGLLSWAAPEEADT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCE
VVASRDPALDEDTLRRLARAAQPQLIATCRDLGFPDGDGIHPGPGQTVARVEQALDAQAM
EEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEE
VLGKPNPYALESVMDLPAPLSDCVVIGDSPLQDVALARKAGARAVLVASGGEAPDGPEPD
EECCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
WRIDAIDQLLPLLCR
CHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYAPLIFDLHGVLLGRREPDGHLPAGEVLRQLRAAGHPLRFLTNSSSVERRQVVAQLAS
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
AGVEVDAGEVYTAAMTVAHYLRRCGRPRKLFVVGSDALRAELDAMCGGLLSWAAPEEADT
CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCE
VVASRDPALDEDTLRRLARAAQPQLIATCRDLGFPDGDGIHPGPGQTVARVEQALDAQAM
EEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEE
VLGKPNPYALESVMDLPAPLSDCVVIGDSPLQDVALARKAGARAVLVASGGEAPDGPEPD
EECCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
WRIDAIDQLLPLLCR
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]