| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499411
Identifier: 34499411
GI number: 34499411
Start: 4276591
End: 4277475
Strand: Reverse
Name: 34499411
Synonym: CV_3956
Alternate gene names: NA
Gene position: 4277475-4276591 (Counterclockwise)
Preceding gene: 34499412
Following gene: 34499410
Centisome position: 90.03
GC content: 65.2
Gene sequence:
>885_bases ATGAATATCCGCGCCTTGAGCCTAGGCACCGCCGGCTACTTCTTCACCAACCGCTTCCACATCGCGCTGATGCCGGTGTT CCTCACCTATTTCTGGAACCAGGCGCTGCGCTTGCCGCTGGCTTTCGATTACTACCTGATGATCGTGCTGACCACAGCCG GCGGCTACATCTACAACATCTACACCGACGCCGAGGAAGACGGCGTCAACTACAGCAGCCGCTACCGCCTGTTCGGCCGC AACCGCCACACCAAGGCGGTGGTCGCCGCCTGCTTCTTCGGCGGCTTTCTGCTGTCGCTGCACGCCGGTTGGATCTTCGT CCTCTACGGCGGCGCCGTGCATTTCCTGGGTTCGCTGTACAGCCGGCCGCTGCCCTTCGTCTGGCGCGGCCGGCCGCTGC GGATCAAGGAAGTGCCGTTCGTGAAGAATCTGTACGCCGGCCTGTTCTGGTCGGTGGCGCTGGTGCTGACGCCGCATCTC TACGTCGGCGTCCGCCCCGGCGAGGCCGCGCTGCAGGCCATCGTCCTCAGCTTCGCCCTCAATTACTTCGTCGAGCTGAT GTGGGACATCCGCGACATGCCGGGCGATGCGCGTGCCGGTTTCCGCACCGTGCCGCTGCTGCTCGGCGAGCGCGCCGCCT ACTGGCTGCTGCGGCTGGTGCACCTGCTGACCTGCGCGCTGATGTATTACGGCGCGGCCTCCGGTGTGCTGACGCCGGGC TGCGTGCTGTTCGCCGTCGTGCATCTGCCGGTGGGCCTGTTGTTTCTGGAATGGTACCGGCGCCAGCCGGAGAAGGACTG GGCCTCCCATCTGTACATCATGTACGGCGGCGGCCTGCTGGCGGCCGGCATGGTGTGGACGCATGCACTGACTACAGGGA GTTGA
Upstream 100 bases:
>100_bases GTGCTGGTGGCGTCGGGCGGCGAAGCGCCGGACGGCCCGGAGCCGGACTGGCGCATCGACGCCATCGATCAACTGCTTCC CTTACTGTGCAGGTGACAGC
Downstream 100 bases:
>100_bases TGTGATTACCACGCAATTCAAGGCTGCGCAGCAATGCGCGTCGGCCGCCCTCCACCGCTACCTGCCGCAGCGCGAGGACA TGGCCTGGCTGGCCGAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Prenyltransferase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNIRALSLGTAGYFFTNRFHIALMPVFLTYFWNQALRLPLAFDYYLMIVLTTAGGYIYNIYTDAEEDGVNYSSRYRLFGR NRHTKAVVAACFFGGFLLSLHAGWIFVLYGGAVHFLGSLYSRPLPFVWRGRPLRIKEVPFVKNLYAGLFWSVALVLTPHL YVGVRPGEAALQAIVLSFALNYFVELMWDIRDMPGDARAGFRTVPLLLGERAAYWLLRLVHLLTCALMYYGAASGVLTPG CVLFAVVHLPVGLLFLEWYRRQPEKDWASHLYIMYGGGLLAAGMVWTHALTTGS
Sequences:
>Translated_294_residues MNIRALSLGTAGYFFTNRFHIALMPVFLTYFWNQALRLPLAFDYYLMIVLTTAGGYIYNIYTDAEEDGVNYSSRYRLFGR NRHTKAVVAACFFGGFLLSLHAGWIFVLYGGAVHFLGSLYSRPLPFVWRGRPLRIKEVPFVKNLYAGLFWSVALVLTPHL YVGVRPGEAALQAIVLSFALNYFVELMWDIRDMPGDARAGFRTVPLLLGERAAYWLLRLVHLLTCALMYYGAASGVLTPG CVLFAVVHLPVGLLFLEWYRRQPEKDWASHLYIMYGGGLLAAGMVWTHALTTGS >Mature_294_residues MNIRALSLGTAGYFFTNRFHIALMPVFLTYFWNQALRLPLAFDYYLMIVLTTAGGYIYNIYTDAEEDGVNYSSRYRLFGR NRHTKAVVAACFFGGFLLSLHAGWIFVLYGGAVHFLGSLYSRPLPFVWRGRPLRIKEVPFVKNLYAGLFWSVALVLTPHL YVGVRPGEAALQAIVLSFALNYFVELMWDIRDMPGDARAGFRTVPLLLGERAAYWLLRLVHLLTCALMYYGAASGVLTPG CVLFAVVHLPVGLLFLEWYRRQPEKDWASHLYIMYGGGLLAAGMVWTHALTTGS
Specific function: Unknown
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33192; Mature: 33192
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRALSLGTAGYFFTNRFHIALMPVFLTYFWNQALRLPLAFDYYLMIVLTTAGGYIYNI CCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEE YTDAEEDGVNYSSRYRLFGRNRHTKAVVAACFFGGFLLSLHAGWIFVLYGGAVHFLGSLY EECCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH SRPLPFVWRGRPLRIKEVPFVKNLYAGLFWSVALVLTPHLYVGVRPGEAALQAIVLSFAL CCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH NYFVELMWDIRDMPGDARAGFRTVPLLLGERAAYWLLRLVHLLTCALMYYGAASGVLTPG HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH CVLFAVVHLPVGLLFLEWYRRQPEKDWASHLYIMYGGGLLAAGMVWTHALTTGS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIRALSLGTAGYFFTNRFHIALMPVFLTYFWNQALRLPLAFDYYLMIVLTTAGGYIYNI CCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEE YTDAEEDGVNYSSRYRLFGRNRHTKAVVAACFFGGFLLSLHAGWIFVLYGGAVHFLGSLY EECCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH SRPLPFVWRGRPLRIKEVPFVKNLYAGLFWSVALVLTPHLYVGVRPGEAALQAIVLSFAL CCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH NYFVELMWDIRDMPGDARAGFRTVPLLLGERAAYWLLRLVHLLTCALMYYGAASGVLTPG HHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH CVLFAVVHLPVGLLFLEWYRRQPEKDWASHLYIMYGGGLLAAGMVWTHALTTGS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA