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The map label for this gene is fliC1 [H]

Identifier: 34499334

GI number: 34499334

Start: 4180697

End: 4181545

Strand: Reverse

Name: fliC1 [H]

Synonym: CV_3879

Alternate gene names: 34499334

Gene position: 4181545-4180697 (Counterclockwise)

Preceding gene: 34499335

Following gene: 34499333

Centisome position: 88.01

GC content: 62.07

Gene sequence:

>849_bases
ATGGCAATTACCGTCAATACCAATACCAGTTCGCTGCAGGCTCAGCTGAACCTGAATGGCTCCCAGATGGCGCTGTCCAG
GTCGCTGCAGCGGCTGTCTTCCGGCCTGCGCATCAACAGCGCCAAGGACGACGCGGCCGGTCTGGCGATTTCGCAGACCC
TGACCTCGGCCATCCGCGGCAACAACCAGGCCGTCAACAACGCCAACGACGGCATTTCCGTCGGGCAGACGGCGGAAGGC
GCGCTGGGGCAGATCGCCAACAACCTGCAGCGTATCCGCGAAATCGCGGTGCAGGCGTCCAACGGCTCGGTCAGCAACAC
CAACCGCTCGCAGCTGCAGAACGAAGTGGATCAGCTGACCCAGGAAATCTCGCGTATCGTGCAGACCACCCAGTTCAACG
GCACCTCGCTGTTGTCCGGCAGCGCGGTGCTGACTTTCCAGGTCGGTTCCTCCGGCGCCAGCAGCAACCAGGTTTCGGTT
TCCTCGGTGGACATGACTTCCGCCGGCGTCCTGTGCAGCTACAACTCGTCCTTGACCAATACCGGCACCATCAGCGTGCT
GAGCCAGGGCAGCGCTTCCGCGGTGCTGTCGAGCCTGGATCACGATATCGCCGCGATCTCGAACGTGCGTTCCACCTGGG
GCTCGGTGCAGAACCGCTTCGACGCGGTGGTGGCCAACCTGCAGAACTATGTGCAGAACCTGACCGCTGCCAATAGCCGT
ATCCTGGATGTGGACTTCGCCTCTGAAACCGCGAACCTGACCAAGAACCAGATTCTGCAGCAGGCCGGCTCTTCCATCCT
GAAGCAGGCCAACTCTTTGCCGCAGGCCGCGCTGACGCTGCTGCAGTAA

Upstream 100 bases:

>100_bases
CAGTTTTGCCATTTTCATCAAAGTTTCCCCGCCATGGCCGATCTGATCGGCAACAGGCAATTATTTTGGTGAGCCCGCTG
GGCTGATTAAGAGGAACAAA

Downstream 100 bases:

>100_bases
GCGCAATCGATGGCGCCGCAGTCTGCCTGGCAGCCTGCGGCGGATTGGGGATTGGCAAAGGGATTTGCAGTATTGATGCA
AAAATTCACATCCGGGGCAT

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAITVNTNTSSLQAQLNLNGSQMALSRSLQRLSSGLRINSAKDDAAGLAISQTLTSAIRGNNQAVNNANDGISVGQTAEG
ALGQIANNLQRIREIAVQASNGSVSNTNRSQLQNEVDQLTQEISRIVQTTQFNGTSLLSGSAVLTFQVGSSGASSNQVSV
SSVDMTSAGVLCSYNSSLTNTGTISVLSQGSASAVLSSLDHDIAAISNVRSTWGSVQNRFDAVVANLQNYVQNLTAANSR
ILDVDFASETANLTKNQILQQAGSSILKQANSLPQAALTLLQ

Sequences:

>Translated_282_residues
MAITVNTNTSSLQAQLNLNGSQMALSRSLQRLSSGLRINSAKDDAAGLAISQTLTSAIRGNNQAVNNANDGISVGQTAEG
ALGQIANNLQRIREIAVQASNGSVSNTNRSQLQNEVDQLTQEISRIVQTTQFNGTSLLSGSAVLTFQVGSSGASSNQVSV
SSVDMTSAGVLCSYNSSLTNTGTISVLSQGSASAVLSSLDHDIAAISNVRSTWGSVQNRFDAVVANLQNYVQNLTAANSR
ILDVDFASETANLTKNQILQQAGSSILKQANSLPQAALTLLQ
>Mature_281_residues
AITVNTNTSSLQAQLNLNGSQMALSRSLQRLSSGLRINSAKDDAAGLAISQTLTSAIRGNNQAVNNANDGISVGQTAEGA
LGQIANNLQRIREIAVQASNGSVSNTNRSQLQNEVDQLTQEISRIVQTTQFNGTSLLSGSAVLTFQVGSSGASSNQVSVS
SVDMTSAGVLCSYNSSLTNTGTISVLSQGSASAVLSSLDHDIAAISNVRSTWGSVQNRFDAVVANLQNYVQNLTAANSRI
LDVDFASETANLTKNQILQQAGSSILKQANSLPQAALTLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=170, Percent_Identity=49.4117647058824, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 29303; Mature: 29171

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNTSSLQAQLNLNGSQMALSRSLQRLSSGLRINSAKDDAAGLAISQTLTSAIRG
CEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCC
NNQAVNNANDGISVGQTAEGALGQIANNLQRIREIAVQASNGSVSNTNRSQLQNEVDQLT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QEISRIVQTTQFNGTSLLSGSAVLTFQVGSSGASSNQVSVSSVDMTSAGVLCSYNSSLTN
HHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCC
TGTISVLSQGSASAVLSSLDHDIAAISNVRSTWGSVQNRFDAVVANLQNYVQNLTAANSR
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ILDVDFASETANLTKNQILQQAGSSILKQANSLPQAALTLLQ
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
AITVNTNTSSLQAQLNLNGSQMALSRSLQRLSSGLRINSAKDDAAGLAISQTLTSAIRG
EEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCC
NNQAVNNANDGISVGQTAEGALGQIANNLQRIREIAVQASNGSVSNTNRSQLQNEVDQLT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QEISRIVQTTQFNGTSLLSGSAVLTFQVGSSGASSNQVSVSSVDMTSAGVLCSYNSSLTN
HHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCC
TGTISVLSQGSASAVLSSLDHDIAAISNVRSTWGSVQNRFDAVVANLQNYVQNLTAANSR
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ILDVDFASETANLTKNQILQQAGSSILKQANSLPQAALTLLQ
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8996114 [H]