| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499316
Identifier: 34499316
GI number: 34499316
Start: 4164498
End: 4166657
Strand: Direct
Name: 34499316
Synonym: CV_3861
Alternate gene names: NA
Gene position: 4164498-4166657 (Clockwise)
Preceding gene: 34499315
Following gene: 34499317
Centisome position: 87.65
GC content: 61.57
Gene sequence:
>2160_bases ATGGCGTTTGAATCCTATTCGGTAGCGGTAAAAATCAGCCTTCTGAACGAGATCAGTTCAGGCTTGCGGCTGCTGTCGTC CGATCTGGCACGCTCGCAAAAGGGCGTTGACCAGCTGCAGGGGAAGCTCGACAAACTGCGTGACTTCGCCAAGTCGGGCG CGCTGGCAATTGGCGCGGGCGCCGGCATCACGCTGATGTTCAAGCAGCCGCTGGAGGATGCACGCAAGCTGCAGACGGAG ATCGCGCGCTTCTCCACATTGGGCTTTGGCGATAACGTCAACCGGCAGGCGCAGCAATTCGCACTGGGCATGAAGACCTT CGGCACCAGCCTGACCGACAACATGACGCTGTTGTCTGACGCCATGGCGGTCTTCAAAGACTTGCACCATGCCGAGTTTG CCGCGCCGATCATGGCCAGGATGAAGTTTGCCAACGAAACGTTGTATGGCAAGGCCGGCGGCGAAGCCAATGAACGCAAG TTCATGGATCTGCTGAAGGTGATTGAGCTGCGCGGCGGCACGCTGAGCGAAAAGGTTTTTGCGGAACAGGCCGACTTTGC GCAGAAAGTCATTACCGGCAGCCGCAACCGGGTGGACGCTTCCCAGATGCTGCAGGCGCTGAAAACCGGCGGCCTGGCGC TCACCCGTCGCAGCAATGAGGCCTTCTACCTGGGCGCCGAGCCACTGATCCAGGAGTTTGGCGGATCGCGCTATGGCACC GGCACCATGTCGCTGTATCAAAACCTGGTGCAGATGCGAGGCACCATCACGTCACAGCAAGAGATGTTCCGCCTGGGCCT GCTCAATCCCGCCATGGTCCAGTTCAATAAGCTGGGCAAGCTCAAGAAGGCCAAGGCCGGCGCGTTCATCGGCTCCAACA TTCTGGAGGAACGGGGCGAACTCGCTTTCCTCAAAGAAGTCTTGCTACCGGCCTTCAAGCGGCACGGCATCACAGGCGAT GAGGCCATCATCCGCGAGCTGGGCATGATCCTGAGCAACCGCACCGGTTCCGCGCTGCTGGGCCGGATCTACCAGCAGAT GCCGACACTGGAACGTCAGATTCAGGCCAACAAGTCCGCCATGGGAATTGGCCAGAGCGAGAAGGCCGCGCGCGGCACGG TGGACGGCCAGATGCTGGAACTGCACAAGCAGTGGAACACCTTGATGACCCAACTGGGCGTTTCCATCCTGCCATCCGCC ATCAGCGTGCTGAAGGAGCTGAACAGCTTCCTCAGCGTGACCAACGAGCTGATGAAGAAGGACGGTGACGGCATCAAGGC ACTGACGAAAGACCTGTTCATCCTTGGGCCGGCGCTGATGATCGGCGGCACGATCCAACTGACCAGCCGCGCCATGGGTG GCTTGGGCCTCATCATGAAGCTGTCCAAGATGCAGTCAGAAGCCGCCGCCGGCAGCATGGGTGGTCTGACCCGAGCAACC AAGCTGGCCGAGGTAGAAGCCACCACCACCGCCGGCCGTGTGCGCCGGCTATCCCAAGAGGTGAACGTCCTGGGTAACGC GGCAGCAGCATCCAAGCTGAAGGCCGAAGGCGCGGCGCTGGGTGTGGGCAAACTGTCGGGCACCGTCGGCGAGCTCGACA AGGGCGGCCGCCTGGCCAGGATTGCCGGAGGCCTGTCCCGATTCGCAATGGTGCTGGGGGAAGTCGGTCTAGCGCTGCTG ATCCTGCCGGACATTTTCCGTGCCGCGGCAGATGCCGGCACCATCGCGGGCCGCTGGGTGGCCGGCTGGGGCCAGGACAA AGACAAGAACCAGAACACTCACTTCAAGCCTGGCCAAAGCCTGGGCGTGATGGATAACTACCGCCCCGGCCCAACCGTCG AGCGCGCGAACCAGATGTTCCCGAAGAAGAACGACTTCTTGGCTATCCCGGATGATGGGGCCTACGGCCACAGCAAGGAT CGGTACCAGTTCACCACGCCGGTGTCCGTGCAAAGCCTGTTGGCCCTCTCCCCCATTCCACCAGCAGTACAGCCGGTCAT CAACGTCAAGGTACAGGTCGGCGGCAAGGATGTGGCTGCCGTCGTCACCCGCGAGATGGTCCGCGAGGCCAGCAAACCCC AGACCGGCATGTCTGGTTTCGACGGCTCAATGATGCCGCTGCGTCCTGACATGCCGTCCTCAATTCTCCCCCGGGGCTAA
Upstream 100 bases:
>100_bases CGGGCCGCTGCGCCCAGTTCGTATCGGTGGCCGTCTGGGCTGGCCGGTGGAAGAAGTGGCGGCTCTGGCTGGCCAGGTCA TGAAGGACGGAGACTAAGCC
Downstream 100 bases:
>100_bases GCCCCAGCCATTCCGGCATCACCACGCGTAACCAGAAAGGAAGCTCCATGAACCAGCGAGTCACCGTACACCAGGCCGCC GAAATCAATACCGAAGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MAFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAGAGITLMFKQPLEDARKLQTE IARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSDAMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERK FMDLLKVIELRGGTLSEKVFAEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGELAFLKEVLLPAFKRHGITGD EAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSAMGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSA ISVLKELNSFLSVTNELMKKDGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLARIAGGLSRFAMVLGEVGLALL ILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQSLGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKD RYQFTTPVSVQSLLALSPIPPAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG
Sequences:
>Translated_719_residues MAFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAGAGITLMFKQPLEDARKLQTE IARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSDAMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERK FMDLLKVIELRGGTLSEKVFAEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGELAFLKEVLLPAFKRHGITGD EAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSAMGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSA ISVLKELNSFLSVTNELMKKDGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLARIAGGLSRFAMVLGEVGLALL ILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQSLGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKD RYQFTTPVSVQSLLALSPIPPAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG >Mature_718_residues AFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAGAGITLMFKQPLEDARKLQTEI ARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSDAMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERKF MDLLKVIELRGGTLSEKVFAEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGTG TMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGELAFLKEVLLPAFKRHGITGDE AIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSAMGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSAI SVLKELNSFLSVTNELMKKDGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRATK LAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLARIAGGLSRFAMVLGEVGLALLI LPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQSLGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKDR YQFTTPVSVQSLLALSPIPPAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77123; Mature: 76991
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAG CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECC AGITLMFKQPLEDARKLQTEIARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSD CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH AMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERKFMDLLKVIELRGGTLSEKVF HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH AEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHCCCCCCCC GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGE HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH LAFLKEVLLPAFKRHGITGDEAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH MGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSAISVLKELNSFLSVTNELMKK CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT CCCCHHHHHHHHHHHCCHHHHCCHHEEHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHH KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHCCCHHCCCCCCCHHH IAGGLSRFAMVLGEVGLALLILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCC LGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKDRYQFTTPVSVQSLLALSPIP CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECCHHHHHHHHCCCCC PAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG CCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AFESYSVAVKISLLNEISSGLRLLSSDLARSQKGVDQLQGKLDKLRDFAKSGALAIGAG CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECC AGITLMFKQPLEDARKLQTEIARFSTLGFGDNVNRQAQQFALGMKTFGTSLTDNMTLLSD CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH AMAVFKDLHHAEFAAPIMARMKFANETLYGKAGGEANERKFMDLLKVIELRGGTLSEKVF HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH AEQADFAQKVITGSRNRVDASQMLQALKTGGLALTRRSNEAFYLGAEPLIQEFGGSRYGT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCHHHHHHCCCCCCCC GTMSLYQNLVQMRGTITSQQEMFRLGLLNPAMVQFNKLGKLKKAKAGAFIGSNILEERGE HHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH LAFLKEVLLPAFKRHGITGDEAIIRELGMILSNRTGSALLGRIYQQMPTLERQIQANKSA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH MGIGQSEKAARGTVDGQMLELHKQWNTLMTQLGVSILPSAISVLKELNSFLSVTNELMKK CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGDGIKALTKDLFILGPALMIGGTIQLTSRAMGGLGLIMKLSKMQSEAAAGSMGGLTRAT CCCCHHHHHHHHHHHCCHHHHCCHHEEHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHH KLAEVEATTTAGRVRRLSQEVNVLGNAAAASKLKAEGAALGVGKLSGTVGELDKGGRLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHCCCHHCCCCCCCHHH IAGGLSRFAMVLGEVGLALLILPDIFRAAADAGTIAGRWVAGWGQDKDKNQNTHFKPGQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCC LGVMDNYRPGPTVERANQMFPKKNDFLAIPDDGAYGHSKDRYQFTTPVSVQSLLALSPIP CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECCHHHHHHHHCCCCC PAVQPVINVKVQVGGKDVAAVVTREMVREASKPQTGMSGFDGSMMPLRPDMPSSILPRG CCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA