| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499308
Identifier: 34499308
GI number: 34499308
Start: 4158482
End: 4158712
Strand: Direct
Name: 34499308
Synonym: CV_3853
Alternate gene names: NA
Gene position: 4158482-4158712 (Clockwise)
Preceding gene: 34499307
Following gene: 34499309
Centisome position: 87.53
GC content: 59.74
Gene sequence:
>231_bases ATGCCACCCCATGTCATCACACTCCCTGAAACCGGCTACATTCGTCAGCCTCTACTGGTCGGTGAGGCCAAGTCCGGCAA GCCTGGCATCCTGCCATTCTCAGTCTCAACATTATGGCGCCGCGTCCGCGCCGGCACTTTTCCCGCCCCTATCAAGCTGT CCGATCGTGTTACCGCCTGGAAAGCTGAGGACATACGCGAGTGGCTGGACAGCCAGAACCGTGCGGCATGA
Upstream 100 bases:
>100_bases GATATTTCCCTACCCCTCAGCCCTTTTAGTATTGCCCCTAGGGTAATCTCATGCGCTTTCATTTGACCGTCAACCACGAC GTGTCATAAGGAATCGCAAC
Downstream 100 bases:
>100_bases GGTGACACGCAATGACACTTGCCACCCCACACCAGCCGCGCCATAATTCCCTTGTGCTGGTCAATCCCAGCGCCAGGCTT GGCGGCCTGTTAGACTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage CP4-57 Regulatory; Phage Transcriptional Regulator
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MPPHVITLPETGYIRQPLLVGEAKSGKPGILPFSVSTLWRRVRAGTFPAPIKLSDRVTAWKAEDIREWLDSQNRAA
Sequences:
>Translated_76_residues MPPHVITLPETGYIRQPLLVGEAKSGKPGILPFSVSTLWRRVRAGTFPAPIKLSDRVTAWKAEDIREWLDSQNRAA >Mature_75_residues PPHVITLPETGYIRQPLLVGEAKSGKPGILPFSVSTLWRRVRAGTFPAPIKLSDRVTAWKAEDIREWLDSQNRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8495; Mature: 8364
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPHVITLPETGYIRQPLLVGEAKSGKPGILPFSVSTLWRRVRAGTFPAPIKLSDRVTAW CCCCEEECCCCCCCCCCEEECCCCCCCCCCCEECHHHHHHHHHCCCCCCCEEECCCCCEE KAEDIREWLDSQNRAA CHHHHHHHHHCCCCCC >Mature Secondary Structure PPHVITLPETGYIRQPLLVGEAKSGKPGILPFSVSTLWRRVRAGTFPAPIKLSDRVTAW CCCEEECCCCCCCCCCEEECCCCCCCCCCCEECHHHHHHHHHCCCCCCCEEECCCCCEE KAEDIREWLDSQNRAA CHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA