| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499300
Identifier: 34499300
GI number: 34499300
Start: 4150186
End: 4151178
Strand: Reverse
Name: 34499300
Synonym: CV_3845
Alternate gene names: NA
Gene position: 4151178-4150186 (Counterclockwise)
Preceding gene: 34499302
Following gene: 34499287
Centisome position: 87.37
GC content: 59.11
Gene sequence:
>993_bases ATGGAAACGGGGCGCCGAAGCGCCCCGTGCAATGCTAAGCCGCTGAGTGATCAGACGGCGTCGGCACTGGAATTACTTGG CAGCGGAAGCGGCCTTCTTCTTGCCGGCTTTCTTGGCCGGAGCGGAAGCTTCTTTCTTGGCGGCTTGAGCCTTTTGAGCA GCGGAAGCTTCTTTCTTGGCTACGTGCTTTTTGGCGTGCTTGTGGGCAGCCTTCTTAGCCGGAGCGGAAGCGTCGGCCTT AGCGGCTTGGGCTTTCTGAGCAGCGGAAGCTTCTTTCTTGGCAGCGTGCTTCTTGGCGTGGTGCTTGTGAGCCTTCTTGG CCTTCGGAGCGGAAGCGTCGGCCTTGGCGGCTTGAGCCTTCTGAGCGGAGGCTTCCTTCTTGGCTACGTGCTTCTTGGCC TTCTTGGCTTTCGGAGCGGAAGCGTCGGCCTTGGCGGCTTGGGCTTTTTGAGCAGCGGAAGCTTCTTTCTTGGCAGCGTG CTTCTTGGCGTGGTGCTTGTGAGCCTTCTTGGCCTTCGGAGCGGAAGCGTCGGCCTTAGCGGCTTGAGCCTTCTGAGCGG AGGCTTCCTTCTTGGCTACGTGCTTCTTGGCCTTCTTGGCTTTCGGAGCGGAAGCGTCGGCCTTGGCGGCTTGGGCTTTT TGAGCAGCGGAAGCTTCTTTCTTGGCGGCATGCTTCTTGGCAGCGTGCTTGTGTGCCTTCTTGGCCTTCGGAGCGGAAGC GTCGGCCTTGGCGGCTTGAGCCTTCTGAGCTGCGGAAGCGTCCTTCTTGGCTACGTGCTTCTTGGCCTTCTTGGCCTTCG GAGCGGAAGCGTCAGCCTTGGCAGCTTGAGCCTTTTGAGCGGAAGCTACTTTTTTCTTTTCGGCTTTCTTGGCCTTGTGG ATGGCCGGAGCGGAAGCAGCAGCTTTTTCAGCGGCGAAGCCGTTGGCGGACACCAGGCTGAAAGCAGCGGTCAGGGCGAG CAGAGCCAGCTTTTTCATTTACGAAACTCCTAA
Upstream 100 bases:
>100_bases ATCTTGTGCTCTTTGCTCAGCGGAGCGGATTGGGCGAGGGCGGGGATCAGGGCGAGGCAGAGGGCAATGCGCGGCAGCTT CATCGTGGTGGCACCTGGAA
Downstream 100 bases:
>100_bases GTTTCTTTCGATTGGGTTGAAACGGACCCGAAGAAGTCCTAATTCAGGGCGAATGCTATCGGTGGCAAGGGGGAGCGTCT AGGGGAGGCTTGTATCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues METGRRSAPCNAKPLSDQTASALELLGSGSGLLLAGFLGRSGSFFLGGLSLLSSGSFFLGYVLFGVLVGSLLSRSGSVGL SGLGFLSSGSFFLGSVLLGVVLVSLLGLRSGSVGLGGLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGSV LLGVVLVSLLGLRSGSVGLSGLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGGMLLGSVLVCLLGLRSGS VGLGGLSLLSCGSVLLGYVLLGLLGLRSGSVSLGSLSLLSGSYFFLFGFLGLVDGRSGSSSFFSGEAVGGHQAESSGQGE QSQLFHLRNS
Sequences:
>Translated_330_residues METGRRSAPCNAKPLSDQTASALELLGSGSGLLLAGFLGRSGSFFLGGLSLLSSGSFFLGYVLFGVLVGSLLSRSGSVGL SGLGFLSSGSFFLGSVLLGVVLVSLLGLRSGSVGLGGLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGSV LLGVVLVSLLGLRSGSVGLSGLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGGMLLGSVLVCLLGLRSGS VGLGGLSLLSCGSVLLGYVLLGLLGLRSGSVSLGSLSLLSGSYFFLFGFLGLVDGRSGSSSFFSGEAVGGHQAESSGQGE QSQLFHLRNS >Mature_330_residues METGRRSAPCNAKPLSDQTASALELLGSGSGLLLAGFLGRSGSFFLGGLSLLSSGSFFLGYVLFGVLVGSLLSRSGSVGL SGLGFLSSGSFFLGSVLLGVVLVSLLGLRSGSVGLGGLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGSV LLGVVLVSLLGLRSGSVGLSGLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGGMLLGSVLVCLLGLRSGS VGLGGLSLLSCGSVLLGYVLLGLLGLRSGSVSLGSLSLLSGSYFFLFGFLGLVDGRSGSSSFFSGEAVGGHQAESSGQGE QSQLFHLRNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32537; Mature: 32537
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METGRRSAPCNAKPLSDQTASALELLGSGSGLLLAGFLGRSGSFFLGGLSLLSSGSFFLG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHCCCHHHH YVLFGVLVGSLLSRSGSVGLSGLGFLSSGSFFLGSVLLGVVLVSLLGLRSGSVGLGGLSL HHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGSVLLGVVLVSLLGLRSGSVGLS HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH GLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGGMLLGSVLVCLLGLRSGS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC VGLGGLSLLSCGSVLLGYVLLGLLGLRSGSVSLGSLSLLSGSYFFLFGFLGLVDGRSGSS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCC SFFSGEAVGGHQAESSGQGEQSQLFHLRNS CCCCCCCCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure METGRRSAPCNAKPLSDQTASALELLGSGSGLLLAGFLGRSGSFFLGGLSLLSSGSFFLG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHHCCCHHHH YVLFGVLVGSLLSRSGSVGLSGLGFLSSGSFFLGSVLLGVVLVSLLGLRSGSVGLGGLSL HHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGSVLLGVVLVSLLGLRSGSVGLS HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH GLSLLSGGFLLGYVLLGLLGFRSGSVGLGGLGFLSSGSFFLGGMLLGSVLVCLLGLRSGS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC VGLGGLSLLSCGSVLLGYVLLGLLGLRSGSVSLGSLSLLSGSYFFLFGFLGLVDGRSGSS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCC SFFSGEAVGGHQAESSGQGEQSQLFHLRNS CCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA