Click here to switch to the map view.

The map label for this gene is fdhE [H]

Identifier: 34499297

GI number: 34499297

Start: 4147129

End: 4147956

Strand: Direct

Name: fdhE [H]

Synonym: CV_3842

Alternate gene names: 34499297

Gene position: 4147129-4147956 (Clockwise)

Preceding gene: 34499296

Following gene: 34499298

Centisome position: 87.29

GC content: 72.46

Gene sequence:

>828_bases
ATGAGCCTGCCCGTGCAGCGGCCGCCGGCCGACCTCTTCTCCCGCCGCGCCGACCGGCTGCTGCGATTGGCCGACGGCCA
CGCGATGGCCGGCTTTCTGCGGCTGTGCGCCGCCATCTGCCAACAACAGCAGGCGCTGCACGACGCGTCGCGGCTCGATC
CGCGCGCCGCGCTGGAAAAGCTTGCCGAAGCCTTAACGCCTCAGCTTCCCGTGCCGGCGCAAGCCGCTTTGGATCTTTTG
CTGGCGCAGGACGCCGCCGCGCTCAGCCGCCTGGCCGAGCGCCTGATCAACGGCGACTATCCGGCGGACGGTCCCTTGTT
CGCCGCGCTGCCGCTGCTGGGCGCCGCGCTGCAGGCGCAGGCCACCCGCAGCGTCCGCCAGCGGCCGCTGCCGGAGCCGC
AAAGCCAGGAGCCGCGCTGCCCATGCTGCGGCGGCCTGCCGCTAGCCTCGCTGCTGCTGCGCGGCGACAGCGGCCACGCC
CAACGCTACGTGGTATGCTCGATGTGCAGCCACGCCTGGCCGGTGGGCCGGGTGCGCTGCCTGTCCTGCGGCAACAGCCG
GGATTTGCATTACTACTCGCTGGCGGCGCGCGACTACCTTCCGCCGGAGCCCGACCATCAACGCCCGCACCAGGCGCGCG
GCGCGCGCGAAGTGGAAGCCTGCGATCAATGCCACGGCGCGCTGAAACAGATCTCGCTGCTGCTGGACGCCGACGCGGAG
GCCGGCGCCGACGACCTGGCCAGCCTGGCGCTGGATCTGCTGGCCGGCGAGGCCGGTTACGCCCGCATCGGCTTCAATCC
GCTGTTCCTGCCCGGCGACCCGGCCTGA

Upstream 100 bases:

>100_bases
ATGTAAATAGCAAAACCACCTCAGAGCCTCAATACCCACCATGACCCCCACCCAACCCATCCTGCCGGCTGAGCAGATCC
GCGCCGGCGACGCCCCGCTG

Downstream 100 bases:

>100_bases
GCGCCGGTTCGCGGTCTTTGCCCGGTCCGGCCTGTCCGAGACGGCCCCGCACTTGAGCGGCGGGGCCGGGCGCGCGATAC
TTGCCGGCGAACCGCCAATC

Product: formate dehydrogenase formation protein FdhE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSLPVQRPPADLFSRRADRLLRLADGHAMAGFLRLCAAICQQQQALHDASRLDPRAALEKLAEALTPQLPVPAQAALDLL
LAQDAAALSRLAERLINGDYPADGPLFAALPLLGAALQAQATRSVRQRPLPEPQSQEPRCPCCGGLPLASLLLRGDSGHA
QRYVVCSMCSHAWPVGRVRCLSCGNSRDLHYYSLAARDYLPPEPDHQRPHQARGAREVEACDQCHGALKQISLLLDADAE
AGADDLASLALDLLAGEAGYARIGFNPLFLPGDPA

Sequences:

>Translated_275_residues
MSLPVQRPPADLFSRRADRLLRLADGHAMAGFLRLCAAICQQQQALHDASRLDPRAALEKLAEALTPQLPVPAQAALDLL
LAQDAAALSRLAERLINGDYPADGPLFAALPLLGAALQAQATRSVRQRPLPEPQSQEPRCPCCGGLPLASLLLRGDSGHA
QRYVVCSMCSHAWPVGRVRCLSCGNSRDLHYYSLAARDYLPPEPDHQRPHQARGAREVEACDQCHGALKQISLLLDADAE
AGADDLASLALDLLAGEAGYARIGFNPLFLPGDPA
>Mature_274_residues
SLPVQRPPADLFSRRADRLLRLADGHAMAGFLRLCAAICQQQQALHDASRLDPRAALEKLAEALTPQLPVPAQAALDLLL
AQDAAALSRLAERLINGDYPADGPLFAALPLLGAALQAQATRSVRQRPLPEPQSQEPRCPCCGGLPLASLLLRGDSGHAQ
RYVVCSMCSHAWPVGRVRCLSCGNSRDLHYYSLAARDYLPPEPDHQRPHQARGAREVEACDQCHGALKQISLLLDADAEA
GADDLASLALDLLAGEAGYARIGFNPLFLPGDPA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

Organism=Escherichia coli, GI1790324, Length=294, Percent_Identity=30.6122448979592, Blast_Score=114, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 29449; Mature: 29318

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPVQRPPADLFSRRADRLLRLADGHAMAGFLRLCAAICQQQQALHDASRLDPRAALEK
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAEALTPQLPVPAQAALDLLLAQDAAALSRLAERLINGDYPADGPLFAALPLLGAALQAQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ATRSVRQRPLPEPQSQEPRCPCCGGLPLASLLLRGDSGHAQRYVVCSMCSHAWPVGRVRC
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEE
LSCGNSRDLHYYSLAARDYLPPEPDHQRPHQARGAREVEACDQCHGALKQISLLLDADAE
EECCCCCCCEEEEEHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AGADDLASLALDLLAGEAGYARIGFNPLFLPGDPA
CCHHHHHHHHHHHHHCCCCCEEECCCEECCCCCCC
>Mature Secondary Structure 
SLPVQRPPADLFSRRADRLLRLADGHAMAGFLRLCAAICQQQQALHDASRLDPRAALEK
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAEALTPQLPVPAQAALDLLLAQDAAALSRLAERLINGDYPADGPLFAALPLLGAALQAQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ATRSVRQRPLPEPQSQEPRCPCCGGLPLASLLLRGDSGHAQRYVVCSMCSHAWPVGRVRC
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEE
LSCGNSRDLHYYSLAARDYLPPEPDHQRPHQARGAREVEACDQCHGALKQISLLLDADAE
EECCCCCCCEEEEEHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AGADDLASLALDLLAGEAGYARIGFNPLFLPGDPA
CCHHHHHHHHHHHHHCCCCCEEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA