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The map label for this gene is etfB [H]

Identifier: 34499273

GI number: 34499273

Start: 4117670

End: 4118419

Strand: Reverse

Name: etfB [H]

Synonym: CV_3818

Alternate gene names: 34499273

Gene position: 4118419-4117670 (Counterclockwise)

Preceding gene: 34499275

Following gene: 34499272

Centisome position: 86.68

GC content: 64.0

Gene sequence:

>750_bases
ATGAAAGTTCTAGTCGCAGTGAAACGCGTTGTCGATTACAACGTGAAAGTCCGCGTCAAAGCCGACGGCAGCGACGTTGA
TATCGCCAACGTCAAGATGTCGATGAATCCCTTCGACGAGATCGCCGTGGAAGAGGCGGTGCGTCTGAAGGAAGCCGGCA
AGGTGAGCGAGATCGTCACCGTGTCCATGGGCGTCAAGCAGTGCGAGGAAACGCTGCGCACCGCGCTGGCGATGGGCGCC
GACCGCGCCATCCTGGTGGAAACCGACGTCGAGCTGCAGCCGCTGGCCGTGGCCAAGCTGCTGAAGGCCGTCGCCGACAA
GGAGCAACCGCAACTGGTGATCCTGGGCAAGCAGGCGATCGACGACGACGCCAACCAGACCGGCCAGATGACTTCCGCGC
TGCTGGGCTGGTCCCAGGGCACGTTCGCCTCCAAGGTCGACCTGGCGGCCGAGACCGTGGACGTGATCCGCGAGATCGAC
GGTGGCCTGGAAACCGTCAAGCTGCGCCTGCCGGCCGTGGTCACCGCCGACCTGCGCCTGAACGAGCCGCGCTTCATCAA
GCTGCCCAACATCATGGCCGCCAAGAAGAAGCCGCTGGACAAGACCACGCCGGCCGAACTGGGCGTCGACGCCGCGCCGC
GCCTGAAGACGCTGAAAGTGGCCGAACCGGCCAAGCGTTCCGCCGGCATCAAGGTGGCCAACGCCGCCGAACTGGTCGCC
AAACTCAAGAACGAAGCAAAGGTGCTGTAA

Upstream 100 bases:

>100_bases
ACCAAACGCTCGTTTGAATTTTGCTTGGGGCATAATCAGGCTCTGCTGGCCGTCGTTGCCTTCCGCGTTCGATTAACCCA
CAGAAGTTTGCTGGAGGAAT

Downstream 100 bases:

>100_bases
GACATGGCTATTCTCGTTATCGCTGAACACGACAACCAGAGCCTGAAGGCAGGCACCCTGAACACCATCACCGCCGCGGC
CAAGCTGGGCGAAGTGCATG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVAVKRVVDYNVKVRVKADGSDVDIANVKMSMNPFDEIAVEEAVRLKEAGKVSEIVTVSMGVKQCEETLRTALAMGA
DRAILVETDVELQPLAVAKLLKAVADKEQPQLVILGKQAIDDDANQTGQMTSALLGWSQGTFASKVDLAAETVDVIREID
GGLETVKLRLPAVVTADLRLNEPRFIKLPNIMAAKKKPLDKTTPAELGVDAAPRLKTLKVAEPAKRSAGIKVANAAELVA
KLKNEAKVL

Sequences:

>Translated_249_residues
MKVLVAVKRVVDYNVKVRVKADGSDVDIANVKMSMNPFDEIAVEEAVRLKEAGKVSEIVTVSMGVKQCEETLRTALAMGA
DRAILVETDVELQPLAVAKLLKAVADKEQPQLVILGKQAIDDDANQTGQMTSALLGWSQGTFASKVDLAAETVDVIREID
GGLETVKLRLPAVVTADLRLNEPRFIKLPNIMAAKKKPLDKTTPAELGVDAAPRLKTLKVAEPAKRSAGIKVANAAELVA
KLKNEAKVL
>Mature_249_residues
MKVLVAVKRVVDYNVKVRVKADGSDVDIANVKMSMNPFDEIAVEEAVRLKEAGKVSEIVTVSMGVKQCEETLRTALAMGA
DRAILVETDVELQPLAVAKLLKAVADKEQPQLVILGKQAIDDDANQTGQMTSALLGWSQGTFASKVDLAAETVDVIREID
GGLETVKLRLPAVVTADLRLNEPRFIKLPNIMAAKKKPLDKTTPAELGVDAAPRLKTLKVAEPAKRSAGIKVANAAELVA
KLKNEAKVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=59.1269841269841, Blast_Score=285, Evalue=4e-77,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=57.8059071729958, Blast_Score=261, Evalue=6e-70,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=29.4372294372294, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=53.3596837944664, Blast_Score=240, Evalue=5e-64,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=45.6, Blast_Score=209, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=56.5737051792829, Blast_Score=254, Evalue=4e-68,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=56.5737051792829, Blast_Score=254, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26727; Mature: 26727

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAVKRVVDYNVKVRVKADGSDVDIANVKMSMNPFDEIAVEEAVRLKEAGKVSEIVT
CHHHHEEHHHHCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHEEE
VSMGVKQCEETLRTALAMGADRAILVETDVELQPLAVAKLLKAVADKEQPQLVILGKQAI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHC
DDDANQTGQMTSALLGWSQGTFASKVDLAAETVDVIREIDGGLETVKLRLPAVVTADLRL
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEECEEE
NEPRFIKLPNIMAAKKKPLDKTTPAELGVDAAPRLKTLKVAEPAKRSAGIKVANAAELVA
CCCCEEECCCHHHHCCCCCCCCCCHHCCCCCCCCEEEEECCCCHHHHCCEEEHHHHHHHH
KLKNEAKVL
HHHHHCCCC
>Mature Secondary Structure
MKVLVAVKRVVDYNVKVRVKADGSDVDIANVKMSMNPFDEIAVEEAVRLKEAGKVSEIVT
CHHHHEEHHHHCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHEEE
VSMGVKQCEETLRTALAMGADRAILVETDVELQPLAVAKLLKAVADKEQPQLVILGKQAI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHC
DDDANQTGQMTSALLGWSQGTFASKVDLAAETVDVIREIDGGLETVKLRLPAVVTADLRL
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEECEEE
NEPRFIKLPNIMAAKKKPLDKTTPAELGVDAAPRLKTLKVAEPAKRSAGIKVANAAELVA
CCCCEEECCCHHHHCCCCCCCCCCHHCCCCCCCCEEEEECCCCHHHHCCEEEHHHHHHHH
KLKNEAKVL
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]