Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34499234

Identifier: 34499234

GI number: 34499234

Start: 4075113

End: 4075268

Strand: Direct

Name: 34499234

Synonym: CV_3779

Alternate gene names: NA

Gene position: 4075113-4075268 (Clockwise)

Preceding gene: 34499233

Following gene: 34499240

Centisome position: 85.77

GC content: 67.95

Gene sequence:

>156_bases
ATGGCGTTCCCCACCGCAGTCAACGACCAGATCACCGATGCCGTCGCGCAGGGCAATCTCAAAACGCCGGGCGCCGAGTC
CGCGCCGGACCGCGACGGCCTGCCCCCCGACCCTGCCGAACTGGAGGAGCTGATCCGCCAGCTCAAGACGGAATGA

Upstream 100 bases:

>100_bases
GAAGGCGCCGCTGCAGATGACTGCGTAGTTGCAACGATTCCGGCCAGCCGGCCGGACGGCTAATCTGAATATCCGCCACA
CTCAAGCAAGGAGACCGGCC

Downstream 100 bases:

>100_bases
TCCTGCCGGCGTCCGCATGCGAAAAGGGCTGCCCCAGGCAGCCCTTTCTCTCGGCTCGGATTTCCGCGCCCGTTCAATAC
CACTCGATGCCCTGCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MAFPTAVNDQITDAVAQGNLKTPGAESAPDRDGLPPDPAELEELIRQLKTE

Sequences:

>Translated_51_residues
MAFPTAVNDQITDAVAQGNLKTPGAESAPDRDGLPPDPAELEELIRQLKTE
>Mature_50_residues
AFPTAVNDQITDAVAQGNLKTPGAESAPDRDGLPPDPAELEELIRQLKTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5432; Mature: 5301

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFPTAVNDQITDAVAQGNLKTPGAESAPDRDGLPPDPAELEELIRQLKTE
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFPTAVNDQITDAVAQGNLKTPGAESAPDRDGLPPDPAELEELIRQLKTE
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA