| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499230
Identifier: 34499230
GI number: 34499230
Start: 4072248
End: 4073357
Strand: Reverse
Name: 34499230
Synonym: CV_3775
Alternate gene names: NA
Gene position: 4073357-4072248 (Counterclockwise)
Preceding gene: 34499231
Following gene: 34499229
Centisome position: 85.74
GC content: 64.86
Gene sequence:
>1110_bases ATGACACGCAAGGAATTCCTGAAGCAGCTGGAACACGCGCTGTCCGGCCTGAGGCCGGAGGCGGCGCGCGAAATCCTCGC CGACTACGACGAGTATTTCAACGACGCGCTGGCCGACGGCCGCGACGAGGCCGAGGTGGTGGAGGCGCTGGGCAGCCCGC AGAAGCTGGCGCGGGAATTGAAGGCGCAAACCCATTACCGGCAATGGCAGGAGCATCGCTCCTTCGCCAACCTGTCGCGG GTGGTGATGTCGATCGCCGGCCTGGGCGTATTGAACTTTGTTCTGGCGATTCCCTTCCTGGTCTATCTGCTGTTCCTGAC CGTCGGCTACATCGCGTCGATCGGCTTTTTGATGGCGGGCTTGACGGTGGTGCTGGCCTGGGGCAGCCACAGCCTGTTCG GCTGGCCGCAGTTCACCAGCGACGGTTCCGGCTGGTATATCGGCCGCTACGGCGACAACGGCGCCGAAATGGCCTGGCGC AGCGACAGGAGCGACCACGCCGAACAGGTCTGGATCGACAACGGATTGCTGGTGCTGAGGCCGGACGATGGCGACCGCTT CGAGCTCAGAACCCGGCAGGGAGAGCCGCTGCTGGTGTCCAGGTCGGACGACAAGCTGACGGTGGACGCCAGCCAGCCTG CGGTGCGCCAGCTGGTCCGGATCCGCGACGACGAGGTCAGCATCGACGGCGGCGCGATTCGCGAGCTGAAGCTGAAGGAG GAAAGCGGGGACGTGTTCACCGCCAGGGTCGACGACGGCAGCCGCCTGGTGCGCGTGGACGCCTCCTCTGCTGGCGGAAC CGTGCTGAAACTGGTGGCCAGCGGTCCGAGCGGCAGCATCTCGCTGAAGGACGGCGACAGCACGCTGGAGATTTCAGAGC GCAGCATCGAGCTGAAAGACGGCATGGACCATATCCAGATCGATGCGCTGCCTGGTTTGTCGGTAGGGATGAGCGCGCTG GTGGTGGGATTGCTGCTGCTGCTGGGCGGTTCGCTGGGGCTGGTGTTCTGCGTGTGGCTGACCCGGCTGACCTGGCGCGC GCTGGTCGCCTATGTGAAATATCAGATTGAGCTGGTTTCCGGCAAGGTCGGCGAAAACGCCGAGGCCTGA
Upstream 100 bases:
>100_bases GGGAACTGGAAACGATGCGGCAGGAATGGCAGGAATTTGTGGCCGAAGTGGAAAACGTGCTGCGGGGCGGACCGGCGGCA ACGAAAGAGGGAGCGCAGCA
Downstream 100 bases:
>100_bases ATCTTAAACTTCGCAATGGAGTATGGATCATGAAGAACGATGCCTGCCTGCAACAACTGCAACTGACCCTGGTCGAATTG CCGGAAGCCGAATTGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTRKEFLKQLEHALSGLRPEAAREILADYDEYFNDALADGRDEAEVVEALGSPQKLARELKAQTHYRQWQEHRSFANLSR VVMSIAGLGVLNFVLAIPFLVYLLFLTVGYIASIGFLMAGLTVVLAWGSHSLFGWPQFTSDGSGWYIGRYGDNGAEMAWR SDRSDHAEQVWIDNGLLVLRPDDGDRFELRTRQGEPLLVSRSDDKLTVDASQPAVRQLVRIRDDEVSIDGGAIRELKLKE ESGDVFTARVDDGSRLVRVDASSAGGTVLKLVASGPSGSISLKDGDSTLEISERSIELKDGMDHIQIDALPGLSVGMSAL VVGLLLLLGGSLGLVFCVWLTRLTWRALVAYVKYQIELVSGKVGENAEA
Sequences:
>Translated_369_residues MTRKEFLKQLEHALSGLRPEAAREILADYDEYFNDALADGRDEAEVVEALGSPQKLARELKAQTHYRQWQEHRSFANLSR VVMSIAGLGVLNFVLAIPFLVYLLFLTVGYIASIGFLMAGLTVVLAWGSHSLFGWPQFTSDGSGWYIGRYGDNGAEMAWR SDRSDHAEQVWIDNGLLVLRPDDGDRFELRTRQGEPLLVSRSDDKLTVDASQPAVRQLVRIRDDEVSIDGGAIRELKLKE ESGDVFTARVDDGSRLVRVDASSAGGTVLKLVASGPSGSISLKDGDSTLEISERSIELKDGMDHIQIDALPGLSVGMSAL VVGLLLLLGGSLGLVFCVWLTRLTWRALVAYVKYQIELVSGKVGENAEA >Mature_368_residues TRKEFLKQLEHALSGLRPEAAREILADYDEYFNDALADGRDEAEVVEALGSPQKLARELKAQTHYRQWQEHRSFANLSRV VMSIAGLGVLNFVLAIPFLVYLLFLTVGYIASIGFLMAGLTVVLAWGSHSLFGWPQFTSDGSGWYIGRYGDNGAEMAWRS DRSDHAEQVWIDNGLLVLRPDDGDRFELRTRQGEPLLVSRSDDKLTVDASQPAVRQLVRIRDDEVSIDGGAIRELKLKEE SGDVFTARVDDGSRLVRVDASSAGGTVLKLVASGPSGSISLKDGDSTLEISERSIELKDGMDHIQIDALPGLSVGMSALV VGLLLLLGGSLGLVFCVWLTRLTWRALVAYVKYQIELVSGKVGENAEA
Specific function: Unknown
COG id: COG4709
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40468; Mature: 40336
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKEFLKQLEHALSGLRPEAAREILADYDEYFNDALADGRDEAEVVEALGSPQKLAREL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH KAQTHYRQWQEHRSFANLSRVVMSIAGLGVLNFVLAIPFLVYLLFLTVGYIASIGFLMAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTVVLAWGSHSLFGWPQFTSDGSGWYIGRYGDNGAEMAWRSDRSDHAEQVWIDNGLLVLR HHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEE PDDGDRFELRTRQGEPLLVSRSDDKLTVDASQPAVRQLVRIRDDEVSIDGGAIRELKLKE CCCCCEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHCCCCEECCCCCEEEEEEEC ESGDVFTARVDDGSRLVRVDASSAGGTVLKLVASGPSGSISLKDGDSTLEISERSIELKD CCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEECCCEEECCC GMDHIQIDALPGLSVGMSALVVGLLLLLGGSLGLVFCVWLTRLTWRALVAYVKYQIELVS CCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC GKVGENAEA CCCCCCCCC >Mature Secondary Structure TRKEFLKQLEHALSGLRPEAAREILADYDEYFNDALADGRDEAEVVEALGSPQKLAREL CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH KAQTHYRQWQEHRSFANLSRVVMSIAGLGVLNFVLAIPFLVYLLFLTVGYIASIGFLMAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTVVLAWGSHSLFGWPQFTSDGSGWYIGRYGDNGAEMAWRSDRSDHAEQVWIDNGLLVLR HHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEE PDDGDRFELRTRQGEPLLVSRSDDKLTVDASQPAVRQLVRIRDDEVSIDGGAIRELKLKE CCCCCEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHCCCCEECCCCCEEEEEEEC ESGDVFTARVDDGSRLVRVDASSAGGTVLKLVASGPSGSISLKDGDSTLEISERSIELKD CCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEECCCEEECCC GMDHIQIDALPGLSVGMSALVVGLLLLLGGSLGLVFCVWLTRLTWRALVAYVKYQIELVS CCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC GKVGENAEA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA