| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499216
Identifier: 34499216
GI number: 34499216
Start: 4058859
End: 4059632
Strand: Reverse
Name: 34499216
Synonym: CV_3761
Alternate gene names: NA
Gene position: 4059632-4058859 (Counterclockwise)
Preceding gene: 34499217
Following gene: 34499215
Centisome position: 85.45
GC content: 71.58
Gene sequence:
>774_bases ATGAACGGTCGGAATAAGTTTTTCTGGGCGGGCATGCTGTCGCTTTGCGCCCAGGCTGCCTGGGCTGACGGCGCCTGCGT TCTGAACGGCGCGCAGGGAAGCGGCCGGCAAGCGTCGCTGCTGGAGCTGTACACCTCGGAGGGCTGCAGCAGCTGCCCGC CGGCCGAGGCCTGGTTGTCGGGATTGGCCGCGGCAGGGCTGGACGCGCGGCGGGTGGTGCCGCTGGCCTTCCATGTCGAC TACTGGGACGGGCTGGGCTGGCGGGACCGTTTCGCCAAGCCCGATTATTCCCAGCGCCAGCGTTGGCGCTCGGCCCAGGC CGGCTCGACGCTGGTCTACACGCCGCAGCTGCTGCTTGACGGCCGCGATTGGCGCTTCGCCGGCTATGACGGGCTGCGGG CCGGCTTGCGCGGCGGACGGGCGGGCGCCTCGTTGCGCGTGAGCGGACGGCTGGCCGGCGACGGCGTGGATGTCGAAGTC GAAGCCGTTCTGGAGTCCGGCTCTCCGGCGCAGCGCCTGATGCTGGCCGTGTTCGAGGATGGCTTGCAAAGCCGGGTGGA GGCTGGCGAGAACGAGGGCAGGCTGTTGCGGCACGACGCCGTGGCGCGAAGCTTGGCGGGGCCCTTTCCCTTGTCCGGGG CCAAAACGACGCTGAGGCGCCATTTGCGGTTCGCCGGCGGCCAGCGGCCGGGGGCCAGCGGCGTGGCCGTCTGGCTGGAG GATGGGCAGGGGCGGGTGAGCCAGGCGCTGGCCGCGCGTTGCGCAGGTGGCTGA
Upstream 100 bases:
>100_bases CGCCCCGCAGCGCCCGTCCCGCCGGGATCCCGACCCGCGCCCATCGCAAGAAAACCTCTCCGTCCGCGACTAATTTGCGG ATGGAAACAGGAGAGCGGAA
Downstream 100 bases:
>100_bases ACAGACAGGTGCGCTTTCCGCCGGGAATGCCGATCCTATGCGAGGTCCGGCCCCGATATTCGGGGCATGGATTGTCGTTT CATCAGTCTTGGGAGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNGRNKFFWAGMLSLCAQAAWADGACVLNGAQGSGRQASLLELYTSEGCSSCPPAEAWLSGLAAAGLDARRVVPLAFHVD YWDGLGWRDRFAKPDYSQRQRWRSAQAGSTLVYTPQLLLDGRDWRFAGYDGLRAGLRGGRAGASLRVSGRLAGDGVDVEV EAVLESGSPAQRLMLAVFEDGLQSRVEAGENEGRLLRHDAVARSLAGPFPLSGAKTTLRRHLRFAGGQRPGASGVAVWLE DGQGRVSQALAARCAGG
Sequences:
>Translated_257_residues MNGRNKFFWAGMLSLCAQAAWADGACVLNGAQGSGRQASLLELYTSEGCSSCPPAEAWLSGLAAAGLDARRVVPLAFHVD YWDGLGWRDRFAKPDYSQRQRWRSAQAGSTLVYTPQLLLDGRDWRFAGYDGLRAGLRGGRAGASLRVSGRLAGDGVDVEV EAVLESGSPAQRLMLAVFEDGLQSRVEAGENEGRLLRHDAVARSLAGPFPLSGAKTTLRRHLRFAGGQRPGASGVAVWLE DGQGRVSQALAARCAGG >Mature_257_residues MNGRNKFFWAGMLSLCAQAAWADGACVLNGAQGSGRQASLLELYTSEGCSSCPPAEAWLSGLAAAGLDARRVVPLAFHVD YWDGLGWRDRFAKPDYSQRQRWRSAQAGSTLVYTPQLLLDGRDWRFAGYDGLRAGLRGGRAGASLRVSGRLAGDGVDVEV EAVLESGSPAQRLMLAVFEDGLQSRVEAGENEGRLLRHDAVARSLAGPFPLSGAKTTLRRHLRFAGGQRPGASGVAVWLE DGQGRVSQALAARCAGG
Specific function: Unknown
COG id: COG5429
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27332; Mature: 27332
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRNKFFWAGMLSLCAQAAWADGACVLNGAQGSGRQASLLELYTSEGCSSCPPAEAWLS CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH GLAAAGLDARRVVPLAFHVDYWDGLGWRDRFAKPDYSQRQRWRSAQAGSTLVYTPQLLLD HHHHCCCCCCEEEEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEECCHHEEC GRDWRFAGYDGLRAGLRGGRAGASLRVSGRLAGDGVDVEVEAVLESGSPAQRLMLAVFED CCCCEECCCHHHHHHHCCCCCCCEEEEECEECCCCCCEEEEEEECCCCHHHHHHHHHHHH GLQSRVEAGENEGRLLRHDAVARSLAGPFPLSGAKTTLRRHLRFAGGQRPGASGVAVWLE HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEE DGQGRVSQALAARCAGG CCCCHHHHHHHHHHCCC >Mature Secondary Structure MNGRNKFFWAGMLSLCAQAAWADGACVLNGAQGSGRQASLLELYTSEGCSSCPPAEAWLS CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH GLAAAGLDARRVVPLAFHVDYWDGLGWRDRFAKPDYSQRQRWRSAQAGSTLVYTPQLLLD HHHHCCCCCCEEEEEEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEECCHHEEC GRDWRFAGYDGLRAGLRGGRAGASLRVSGRLAGDGVDVEVEAVLESGSPAQRLMLAVFED CCCCEECCCHHHHHHHCCCCCCCEEEEECEECCCCCCEEEEEEECCCCHHHHHHHHHHHH GLQSRVEAGENEGRLLRHDAVARSLAGPFPLSGAKTTLRRHLRFAGGQRPGASGVAVWLE HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEE DGQGRVSQALAARCAGG CCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA