| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499207
Identifier: 34499207
GI number: 34499207
Start: 4049866
End: 4050864
Strand: Reverse
Name: 34499207
Synonym: CV_3752
Alternate gene names: NA
Gene position: 4050864-4049866 (Counterclockwise)
Preceding gene: 34499210
Following gene: 34499206
Centisome position: 85.26
GC content: 60.96
Gene sequence:
>999_bases ATGCGCCGACCCATGCTTACTCTACAAGATTTGCCTGCTCCGCCGGCCGATTTCTCCGCCGGCAATCCCGATAACGCCGA TTTCTATAGCGCGTTCTCCCGTGGTTGCATGCCTGAGTTCCGGCAGGGTTTTTTCGTCGCGAAGGAGGCCGGCCGTCGCG TGTGCTGCATTCCTTACTTCGTCACCGATCTGGAACTGAACATCCTGTTGCCCAGGGGACCGCTGTTCGCCTGGCTGCCC AAACTGAGCATTCCGATGGCTTGCGTGGGCAACCCGGTGACGGACTTGGGGCGGGTGGAGGGGGAGCTGACGCCCGAAAT CATCGCGGAGGTGACGCGGCGCTTGGGCCAGAAGGGGCGGCTGATCGCCTGGAAGGGATTCGGAGAAGACCTGCCGCTGA ATGGCTACGCCAGGGTGAAGGGTCTGCCGGTTCCCGTCATCCGCTTGCGCGGCGATTACTACGCTTCGCTGAAAGGCAGC CGTCGCCGCGGACTCAGGCGCAAGCTGAAAAAATCGGACAGCTTGCGATACGAAGTGGTCGAAGGGCTGCCAGTCAGCTT GCTGGGCAGGATATACGCGCTCTATCTGCAAACCTGGGAGAAGGCGCCGCTCAAGTTCGGCCGGCTCGGCCCCGACTACT TTACCCGCACCAGCGACGGCAGCATCTACTTGCTGTTTTATCTGCAGGGCGAACTGATCGGCTTCTGCCAGTTGCTGGGC AAGGGGGCGTTGATGATGAACGCCTTTGGCGGACTGGATTACCTGCATGCCTATGATTACGGCCTTTACGCCACCATGCT TATTCGCTCGGTGGAGGTAGCCGAGGCGCGGGGCTGCGCGGAGATCGAGCTGGGTTCCACCAGCTATGCGTTCAAGCGCA TCCTGGGGGCGGAACAGCGGCCCACCTGGAACTATTTCCAGCATCAGTCCAGGCTGCTGAACTGGCTGCTGACGCGTTTC TCGTCGTTGCTGGAGCCCTCCGCGGAAGATCTGAAGTAA
Upstream 100 bases:
>100_bases CTCATGTGATTTCCTTGTTTTTAACTATTTTCATGAACTATAGTAACTAAAACTAAATTATTGGTCTGGTCGGGGCATGG CCGTCATTCTTGGACCCTGG
Downstream 100 bases:
>100_bases GACTCAGGGGGCCTTGTCTCGATCCGGCGGAGCGCCGATAATCGCCGCCAATACCCGTTTTCAAAGCCGTTTTCGATGCA AAGACACAACCTGGAGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRRPMLTLQDLPAPPADFSAGNPDNADFYSAFSRGCMPEFRQGFFVAKEAGRRVCCIPYFVTDLELNILLPRGPLFAWLP KLSIPMACVGNPVTDLGRVEGELTPEIIAEVTRRLGQKGRLIAWKGFGEDLPLNGYARVKGLPVPVIRLRGDYYASLKGS RRRGLRRKLKKSDSLRYEVVEGLPVSLLGRIYALYLQTWEKAPLKFGRLGPDYFTRTSDGSIYLLFYLQGELIGFCQLLG KGALMMNAFGGLDYLHAYDYGLYATMLIRSVEVAEARGCAEIELGSTSYAFKRILGAEQRPTWNYFQHQSRLLNWLLTRF SSLLEPSAEDLK
Sequences:
>Translated_332_residues MRRPMLTLQDLPAPPADFSAGNPDNADFYSAFSRGCMPEFRQGFFVAKEAGRRVCCIPYFVTDLELNILLPRGPLFAWLP KLSIPMACVGNPVTDLGRVEGELTPEIIAEVTRRLGQKGRLIAWKGFGEDLPLNGYARVKGLPVPVIRLRGDYYASLKGS RRRGLRRKLKKSDSLRYEVVEGLPVSLLGRIYALYLQTWEKAPLKFGRLGPDYFTRTSDGSIYLLFYLQGELIGFCQLLG KGALMMNAFGGLDYLHAYDYGLYATMLIRSVEVAEARGCAEIELGSTSYAFKRILGAEQRPTWNYFQHQSRLLNWLLTRF SSLLEPSAEDLK >Mature_332_residues MRRPMLTLQDLPAPPADFSAGNPDNADFYSAFSRGCMPEFRQGFFVAKEAGRRVCCIPYFVTDLELNILLPRGPLFAWLP KLSIPMACVGNPVTDLGRVEGELTPEIIAEVTRRLGQKGRLIAWKGFGEDLPLNGYARVKGLPVPVIRLRGDYYASLKGS RRRGLRRKLKKSDSLRYEVVEGLPVSLLGRIYALYLQTWEKAPLKFGRLGPDYFTRTSDGSIYLLFYLQGELIGFCQLLG KGALMMNAFGGLDYLHAYDYGLYATMLIRSVEVAEARGCAEIELGSTSYAFKRILGAEQRPTWNYFQHQSRLLNWLLTRF SSLLEPSAEDLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37417; Mature: 37417
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPMLTLQDLPAPPADFSAGNPDNADFYSAFSRGCMPEFRQGFFVAKEAGRRVCCIPYF CCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCEEHHHHHCCEEEEEEEE VTDLELNILLPRGPLFAWLPKLSIPMACVGNPVTDLGRVEGELTPEIIAEVTRRLGQKGR EECEEEEEEECCCCHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCC LIAWKGFGEDLPLNGYARVKGLPVPVIRLRGDYYASLKGSRRRGLRRKLKKSDSLRYEVV EEEEECCCCCCCCCCCEEECCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHHH EGLPVSLLGRIYALYLQTWEKAPLKFGRLGPDYFTRTSDGSIYLLFYLQGELIGFCQLLG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCEEEEEEECCHHHHHHHHHC KGALMMNAFGGLDYLHAYDYGLYATMLIRSVEVAEARGCAEIELGSTSYAFKRILGAEQR CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCC PTWNYFQHQSRLLNWLLTRFSSLLEPSAEDLK CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MRRPMLTLQDLPAPPADFSAGNPDNADFYSAFSRGCMPEFRQGFFVAKEAGRRVCCIPYF CCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCEEHHHHHCCEEEEEEEE VTDLELNILLPRGPLFAWLPKLSIPMACVGNPVTDLGRVEGELTPEIIAEVTRRLGQKGR EECEEEEEEECCCCHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCC LIAWKGFGEDLPLNGYARVKGLPVPVIRLRGDYYASLKGSRRRGLRRKLKKSDSLRYEVV EEEEECCCCCCCCCCCEEECCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHHH EGLPVSLLGRIYALYLQTWEKAPLKFGRLGPDYFTRTSDGSIYLLFYLQGELIGFCQLLG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCEEEEEEECCHHHHHHHHHC KGALMMNAFGGLDYLHAYDYGLYATMLIRSVEVAEARGCAEIELGSTSYAFKRILGAEQR CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCC PTWNYFQHQSRLLNWLLTRFSSLLEPSAEDLK CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA