| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is mviN [H]
Identifier: 34499203
GI number: 34499203
Start: 4045938
End: 4047431
Strand: Direct
Name: mviN [H]
Synonym: CV_3748
Alternate gene names: 34499203
Gene position: 4045938-4047431 (Clockwise)
Preceding gene: 34499200
Following gene: 34499204
Centisome position: 85.16
GC content: 65.46
Gene sequence:
>1494_bases ATGGTTTCCCGCGTGCTCGGCCTGGTGCGCGACACGCTGGTTGCCCGCATTTTCGGCGCCGGCATGGCCGCCGACGCCTT CAACGCCGCCTTCAAGATTCCCAACATGCTGCGCCGGCTGTTCGCCGAGGGCGCGTTCTCGCAGGCTTTCGTGCCGATAC TGGGCGAATACAAGCAGAACAGGACGCACGAGGAGACCCGCGAATTCGTCGCCAAGGTCACCGGCGTGCTGGGCTCGGTG TTGCTGCTGGTGACGGCGATAGGCATGCTGGCCGCGCCGGCCATCATGTGGATCTCGGCGCCCGGCTTTTACCGCGAGCC GGCCAAGGCCGCGCTGTTCGCCGACATCCTGCGCGTCTCCTTCCCATATATTTTCTTCATCTCGCTGTCGTCGATGACCG GCAGCGTGCTCAACAGCTGGGGCAAGTTCTCGATCCCGGCTTTCACCCCCACCTTCCTAAACCTCAGCTTCATCGTCTTC GCGCTGGCTTTCACCCATTACTTCCATCCGCCCATCATGGCGATGGCGTGGGCGGTGTTCGTCGGCGGGCTGATCCAGCT GGTGTGGCAGCTGCCCTTCCTGAAGCAGATCGGCATGCTGGCCAAGCCCATCCTCGCCTTCCGCGATCCGGAAGTCTGGC GGGTGATCAAACAGATGGGGCCGGCGATCTTCGGCGTGTCGGTGGCGCAGATCTCGCTGCTGATCAACTCCACCTTCGCC TCCTTCCTGCCCACCGGCAGCGTGTCCTGGATGTATTACGCCGACCGGCTGATGGAATTCCCGTCCGGCGTGCTGGGCGT GGCGCTCGGCACCATCCTGCTTCCGTCCTTGTCCAAACACGCCGCCAGCAAGTCCGACGCCGAGTTCAGCGTGCTGCTGG ACTGGGGCATACGGCTGTCGCTGCTGCTGGCGGTGCCGGCCACCGTCGGCCTGGGCCTGCTGTCCGGCCCCTTGCTGTAC ACCATGTTCATGTACGGCAAGTTCACCGCCCACGACGCCTTGATGTCGCAGCAGGCGGTGATCGCCTACTCCTTCGGCCT GTTGGGGCTGATCCTGGTCAAGGTGCTGGCGCCGGGCTTCTACGCGCGCCAGGACATCAAGACGCCGGTGCGCATCGCGG TGGCGACGCTGATCGCCACCCAGGTGATGAACCTGGCCTTCGTGTTCCCGCTGAAGCACGCCGGCCTGGCGCTGTCGATC GGCCTCGCCTCCTGCATCAATGCCGGCCTGTTGATGCACACGCTGCAAAAGCGCGGCATCTACCGTCCGGAAGCCGGCTG GAAGCCCTTCCTCGCCAAGCTGTTCATCGCCATCGCGGCGATGGCGGCCGCGCTGCTGGCCTGCCAGCAATGGCTGCCGA TAGACTGGCACGGCCACGCCTGGCAGCGCGCGCTGTGGCTGCTGCTGCTGGTCGGCGTCGGCGCGGCGGTTTATTTCGCC GCGCTGTTCGTCCAGGGCTTCCGCCCGCGCCACTTCATGCGCCGCGAGCATTGA
Upstream 100 bases:
>100_bases AATCCCGCCAGCGTAAACTAGCGGGCTTGCTCAACGCCTCTGACACCCAAATAAAGCAATGAACCTGCTCAAGGCCCTGG CTGCAGTCAGCAGCATGACC
Downstream 100 bases:
>100_bases TCATGCGCCAGACGCTCAAGGCTATTTCTCAGGCAGAGCGCCAGGCCTTGACGGTTTTGCTGGTTTGCAGCCTGTGCATG GTCTGGCTGCAATACCCCGC
Product: inner membrane virulence factor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MVSRVLGLVRDTLVARIFGAGMAADAFNAAFKIPNMLRRLFAEGAFSQAFVPILGEYKQNRTHEETREFVAKVTGVLGSV LLLVTAIGMLAAPAIMWISAPGFYREPAKAALFADILRVSFPYIFFISLSSMTGSVLNSWGKFSIPAFTPTFLNLSFIVF ALAFTHYFHPPIMAMAWAVFVGGLIQLVWQLPFLKQIGMLAKPILAFRDPEVWRVIKQMGPAIFGVSVAQISLLINSTFA SFLPTGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKHAASKSDAEFSVLLDWGIRLSLLLAVPATVGLGLLSGPLLY TMFMYGKFTAHDALMSQQAVIAYSFGLLGLILVKVLAPGFYARQDIKTPVRIAVATLIATQVMNLAFVFPLKHAGLALSI GLASCINAGLLMHTLQKRGIYRPEAGWKPFLAKLFIAIAAMAAALLACQQWLPIDWHGHAWQRALWLLLLVGVGAAVYFA ALFVQGFRPRHFMRREH
Sequences:
>Translated_497_residues MVSRVLGLVRDTLVARIFGAGMAADAFNAAFKIPNMLRRLFAEGAFSQAFVPILGEYKQNRTHEETREFVAKVTGVLGSV LLLVTAIGMLAAPAIMWISAPGFYREPAKAALFADILRVSFPYIFFISLSSMTGSVLNSWGKFSIPAFTPTFLNLSFIVF ALAFTHYFHPPIMAMAWAVFVGGLIQLVWQLPFLKQIGMLAKPILAFRDPEVWRVIKQMGPAIFGVSVAQISLLINSTFA SFLPTGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKHAASKSDAEFSVLLDWGIRLSLLLAVPATVGLGLLSGPLLY TMFMYGKFTAHDALMSQQAVIAYSFGLLGLILVKVLAPGFYARQDIKTPVRIAVATLIATQVMNLAFVFPLKHAGLALSI GLASCINAGLLMHTLQKRGIYRPEAGWKPFLAKLFIAIAAMAAALLACQQWLPIDWHGHAWQRALWLLLLVGVGAAVYFA ALFVQGFRPRHFMRREH >Mature_497_residues MVSRVLGLVRDTLVARIFGAGMAADAFNAAFKIPNMLRRLFAEGAFSQAFVPILGEYKQNRTHEETREFVAKVTGVLGSV LLLVTAIGMLAAPAIMWISAPGFYREPAKAALFADILRVSFPYIFFISLSSMTGSVLNSWGKFSIPAFTPTFLNLSFIVF ALAFTHYFHPPIMAMAWAVFVGGLIQLVWQLPFLKQIGMLAKPILAFRDPEVWRVIKQMGPAIFGVSVAQISLLINSTFA SFLPTGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKHAASKSDAEFSVLLDWGIRLSLLLAVPATVGLGLLSGPLLY TMFMYGKFTAHDALMSQQAVIAYSFGLLGLILVKVLAPGFYARQDIKTPVRIAVATLIATQVMNLAFVFPLKHAGLALSI GLASCINAGLLMHTLQKRGIYRPEAGWKPFLAKLFIAIAAMAAALLACQQWLPIDWHGHAWQRALWLLLLVGVGAAVYFA ALFVQGFRPRHFMRREH
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=497, Percent_Identity=61.3682092555332, Blast_Score=587, Evalue=1e-169,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 54450; Mature: 54450
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRVLGLVRDTLVARIFGAGMAADAFNAAFKIPNMLRRLFAEGAFSQAFVPILGEYKQN CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC RTHEETREFVAKVTGVLGSVLLLVTAIGMLAAPAIMWISAPGFYREPAKAALFADILRVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHH FPYIFFISLSSMTGSVLNSWGKFSIPAFTPTFLNLSFIVFALAFTHYFHPPIMAMAWAVF CHHHHEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGGLIQLVWQLPFLKQIGMLAKPILAFRDPEVWRVIKQMGPAIFGVSVAQISLLINSTFA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SFLPTGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKHAASKSDAEFSVLLDWGIRLS HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHH LLLAVPATVGLGLLSGPLLYTMFMYGKFTAHDALMSQQAVIAYSFGLLGLILVKVLAPGF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YARQDIKTPVRIAVATLIATQVMNLAFVFPLKHAGLALSIGLASCINAGLLMHTLQKRGI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC YRPEAGWKPFLAKLFIAIAAMAAALLACQQWLPIDWHGHAWQRALWLLLLVGVGAAVYFA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALFVQGFRPRHFMRREH HHHHHCCCCHHHHCCCC >Mature Secondary Structure MVSRVLGLVRDTLVARIFGAGMAADAFNAAFKIPNMLRRLFAEGAFSQAFVPILGEYKQN CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC RTHEETREFVAKVTGVLGSVLLLVTAIGMLAAPAIMWISAPGFYREPAKAALFADILRVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHH FPYIFFISLSSMTGSVLNSWGKFSIPAFTPTFLNLSFIVFALAFTHYFHPPIMAMAWAVF CHHHHEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGGLIQLVWQLPFLKQIGMLAKPILAFRDPEVWRVIKQMGPAIFGVSVAQISLLINSTFA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SFLPTGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKHAASKSDAEFSVLLDWGIRLS HHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHH LLLAVPATVGLGLLSGPLLYTMFMYGKFTAHDALMSQQAVIAYSFGLLGLILVKVLAPGF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YARQDIKTPVRIAVATLIATQVMNLAFVFPLKHAGLALSIGLASCINAGLLMHTLQKRGI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC YRPEAGWKPFLAKLFIAIAAMAAALLACQQWLPIDWHGHAWQRALWLLLLVGVGAAVYFA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALFVQGFRPRHFMRREH HHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]