| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is modB [H]
Identifier: 34499182
GI number: 34499182
Start: 4024767
End: 4025441
Strand: Direct
Name: modB [H]
Synonym: CV_3727
Alternate gene names: 34499182
Gene position: 4024767-4025441 (Clockwise)
Preceding gene: 34499181
Following gene: 34499183
Centisome position: 84.71
GC content: 67.11
Gene sequence:
>675_bases GTGAGCCCGCAGGACTGGAGCGCGATCGCGCTGACCCTGCGCCTGGCCGGCATCAGCACGCTGCTGCTGCTGGCCCTGTG CATTCCCTGCGCCTGGTGGCTGGCGCACAGCCGCTCCCGGCTGCGCCCCATCATGGAAGCCGGCGCCATGCTGCCGCTGG TGCTGCCGCCGACGGTGCTGGGCTTCTATCTGCTGCTGGCCTTCGGACCGCACGGGCCGGTCGGCAAACTGACATCCTCG CTGGGTTTGCCGGGCCTCGCCTTCACCTTCCCCGGCGTGGTGCTCGCCTCCATCCTGTACTCGCTTCCCTTCGTGTTGCA GCCTTTGCTGGCCAGCTTCCGCGCGGTGCGGCAGGAAGAGCTGGAAAGCGCGCGGCTGCTGGGCGCCGGACGCTGGCAGC GGATGCGCCACGTGATCCTGCCTTCCTGCCGCAGCGGCCTGCTCAGCGCGGCCTGCCTGGGCTTCGCCCATACGGTAGGC GAGTTCGGCGTGGTGCTGATGATAGGCGGCAATATCGACGGCGAAACGCGCGTGATATCGATCGCGCTGTACAATCAGGT GGAGCAGGCCAACTACGGCGCCGCCCACCAGCTGGCGCTGATGTTGCTGCTGTTTTCACTGGCGGCGTTGAGCGCCGTTT ATTGGCTGAACGCCCGACAGAAACAATCCGAATGA
Upstream 100 bases:
>100_bases TGCTGATCAAGCCGACGCCGGCCGCGGCCGCGCTGATGGCCTACCTCAAGGGCGAGCAGGCGCGCGCGCTGATGGCCCAG GCAGGCTACCGCTTCAAGCC
Downstream 100 bases:
>100_bases CATCCGCCCGCGCCGCGGGCGCCACACTGGAGACATCCACCATGCGCAAATCCGTGCTGCTCGCCGTACTCGCCCTGTTC AGCGCCAACCTGGCGCTGGC
Product: molybdate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSPQDWSAIALTLRLAGISTLLLLALCIPCAWWLAHSRSRLRPIMEAGAMLPLVLPPTVLGFYLLLAFGPHGPVGKLTSS LGLPGLAFTFPGVVLASILYSLPFVLQPLLASFRAVRQEELESARLLGAGRWQRMRHVILPSCRSGLLSAACLGFAHTVG EFGVVLMIGGNIDGETRVISIALYNQVEQANYGAAHQLALMLLLFSLAALSAVYWLNARQKQSE
Sequences:
>Translated_224_residues MSPQDWSAIALTLRLAGISTLLLLALCIPCAWWLAHSRSRLRPIMEAGAMLPLVLPPTVLGFYLLLAFGPHGPVGKLTSS LGLPGLAFTFPGVVLASILYSLPFVLQPLLASFRAVRQEELESARLLGAGRWQRMRHVILPSCRSGLLSAACLGFAHTVG EFGVVLMIGGNIDGETRVISIALYNQVEQANYGAAHQLALMLLLFSLAALSAVYWLNARQKQSE >Mature_223_residues SPQDWSAIALTLRLAGISTLLLLALCIPCAWWLAHSRSRLRPIMEAGAMLPLVLPPTVLGFYLLLAFGPHGPVGKLTSSL GLPGLAFTFPGVVLASILYSLPFVLQPLLASFRAVRQEELESARLLGAGRWQRMRHVILPSCRSGLLSAACLGFAHTVGE FGVVLMIGGNIDGETRVISIALYNQVEQANYGAAHQLALMLLLFSLAALSAVYWLNARQKQSE
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=230, Percent_Identity=32.1739130434783, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1788764, Length=198, Percent_Identity=30.3030303030303, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1786980, Length=224, Percent_Identity=29.9107142857143, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1787369, Length=231, Percent_Identity=25.5411255411255, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24174; Mature: 24043
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQDWSAIALTLRLAGISTLLLLALCIPCAWWLAHSRSRLRPIMEAGAMLPLVLPPTVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHH GFYLLLAFGPHGPVGKLTSSLGLPGLAFTFPGVVLASILYSLPFVLQPLLASFRAVRQEE HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESARLLGAGRWQRMRHVILPSCRSGLLSAACLGFAHTVGEFGVVLMIGGNIDGETRVIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHEEE IALYNQVEQANYGAAHQLALMLLLFSLAALSAVYWLNARQKQSE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure SPQDWSAIALTLRLAGISTLLLLALCIPCAWWLAHSRSRLRPIMEAGAMLPLVLPPTVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHH GFYLLLAFGPHGPVGKLTSSLGLPGLAFTFPGVVLASILYSLPFVLQPLLASFRAVRQEE HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESARLLGAGRWQRMRHVILPSCRSGLLSAACLGFAHTVGEFGVVLMIGGNIDGETRVIS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHEEE IALYNQVEQANYGAAHQLALMLLLFSLAALSAVYWLNARQKQSE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]