| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is plsY
Identifier: 34499143
GI number: 34499143
Start: 3989632
End: 3990165
Strand: Reverse
Name: plsY
Synonym: CV_3688
Alternate gene names: 34499143
Gene position: 3990165-3989632 (Counterclockwise)
Preceding gene: 34499145
Following gene: 34499140
Centisome position: 83.98
GC content: 65.92
Gene sequence:
>534_bases ATGGCCGACCCGCGCAGCTATGGCTCCGGCAACCCTGGCGCCACCAATGTGCTGCGCACCGGCAAGAAGCTAGCCGCCGC GCTGACGCTGCTGGGCGACGGCGCCAAGGGCTGGGTGGCGGTGGCGCTGGCCTCCTGGCTGGGACCGCGCTACGGCTTGG GCGAGCAGGGCATCGCGCTGTGCGCGCTGGCGGTGCTGTTTGGCCACATGTGGCCGGTGTTCTTCGGCTTCAAGGGCGGC AAGGGCGTCGCCACCGCGGTCGGCATCCTGTTCGGCATCAATCCCTGGCTGGCGCTGGCTGCGCTGGCCACCTGGCTGTT CATGGCCTTCGTGGTGAAGATATCGTCGCTGTCCGCCATCGTCGCCTGCGTGCTGGCGCCGGTTTACGCCTTTTTCATCC TGGGGCCGCACAGCGTGTATTTCGGCACCTGCATCATCATCGCCATCGTGGTGGTCCATCGCCACAAATCCAACCTGATC AAGCTGATGACCGGCCAGGAAGACAAGATAGGCAACAAGGGCGATGCCGGCTGA
Upstream 100 bases:
>100_bases ATACCGCTCCACCATGACCACGACCGCATTCGCTTTTGTCCTGGCGGCTTATTTGATCGGATCGCTGTCTTTCGCCGTCA TCGTCAGCAAGGCGATGGGC
Downstream 100 bases:
>100_bases CGCGCAGCCCCGAACATGAAAAGCCGCCCCGTGGGGCGGCTTTTTGCTTGCTTGGCGTGTCTCTTTTAGTGAAAGCCGCT GGCGAAGCGCTCCCAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MADPRSYGSGNPGATNVLRTGKKLAAALTLLGDGAKGWVAVALASWLGPRYGLGEQGIALCALAVLFGHMWPVFFGFKGG KGVATAVGILFGINPWLALAALATWLFMAFVVKISSLSAIVACVLAPVYAFFILGPHSVYFGTCIIIAIVVVHRHKSNLI KLMTGQEDKIGNKGDAG
Sequences:
>Translated_177_residues MADPRSYGSGNPGATNVLRTGKKLAAALTLLGDGAKGWVAVALASWLGPRYGLGEQGIALCALAVLFGHMWPVFFGFKGG KGVATAVGILFGINPWLALAALATWLFMAFVVKISSLSAIVACVLAPVYAFFILGPHSVYFGTCIIIAIVVVHRHKSNLI KLMTGQEDKIGNKGDAG >Mature_176_residues ADPRSYGSGNPGATNVLRTGKKLAAALTLLGDGAKGWVAVALASWLGPRYGLGEQGIALCALAVLFGHMWPVFFGFKGGK GVATAVGILFGINPWLALAALATWLFMAFVVKISSLSAIVACVLAPVYAFFILGPHSVYFGTCIIIAIVVVHRHKSNLIK LMTGQEDKIGNKGDAG
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=173, Percent_Identity=41.6184971098266, Blast_Score=111, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_CHRVO (Q7NRU2)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903358.1 - GeneID: 2548638 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_3688 - NMPDR: fig|243365.1.peg.3688 - HOGENOM: HBG734487 - OMA: SRIGEKK - PhylomeDB: Q7NRU2 - BioCyc: CVIO243365:CV_3688-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 18459; Mature: 18328
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x134530c0)-; HASH(0x11d9edc8)-; HASH(0xf8ef3ac)-; HASH(0x12a45d28)-; HASH(0x134718e8)-; HASH(0x1374fe14)-;
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPRSYGSGNPGATNVLRTGKKLAAALTLLGDGAKGWVAVALASWLGPRYGLGEQGIAL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH CALAVLFGHMWPVFFGFKGGKGVATAVGILFGINPWLALAALATWLFMAFVVKISSLSAI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VACVLAPVYAFFILGPHSVYFGTCIIIAIVVVHRHKSNLIKLMTGQEDKIGNKGDAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCCH >Mature Secondary Structure ADPRSYGSGNPGATNVLRTGKKLAAALTLLGDGAKGWVAVALASWLGPRYGLGEQGIAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH CALAVLFGHMWPVFFGFKGGKGVATAVGILFGINPWLALAALATWLFMAFVVKISSLSAI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VACVLAPVYAFFILGPHSVYFGTCIIIAIVVVHRHKSNLIKLMTGQEDKIGNKGDAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14500782