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The map label for this gene is yeeY [H]

Identifier: 34499081

GI number: 34499081

Start: 3929800

End: 3930699

Strand: Reverse

Name: yeeY [H]

Synonym: CV_3626

Alternate gene names: 34499081

Gene position: 3930699-3929800 (Counterclockwise)

Preceding gene: 34499083

Following gene: 34499069

Centisome position: 82.73

GC content: 68.56

Gene sequence:

>900_bases
ATGAAACTGACTCTGGAAGCATTGCAGGTGCTGGACGCGATCGAGCAGCACGGCAGCTTCGCCGCGGCGGCGGAGGCCTT
GTTCAAAGTGCCGTCGGCCTTGACCTATACCGTGCAGAAGCTGGAGCAAGGCCTGGGCGTGGCCATCTACGACCGCAGCG
GCCACCGCGCGCGGCTGACGCCGGCCGGCGAGCGGCTGCTGAAGGATGGCCGCCACCTGCTGGACGCGGCGCGGCAGCTG
GAGCTCAGGGTCAGCAAGCAGGCGCAGGGCTGGGAGGACAGGCTGCGCATCGTGGTCGGCGATCTGGTCGGCTTCGAGCA
GCTGCTGCCGTCCATCGCCGATTTCGACCGATTGCAGTCGGACACCCGGCTGCATTTCATCCGCGAAAGCTTCGGCGGCA
TCTGGGACGCCCTGTACGACGACCGGGCCGACCTGGTGATCGGCGCGCCCAACCAGCCGCCGCCAGGCGATTATTTCACC
CGCAATATCGGCGATTACGACTTCGTGCTGGTCGCGGCGGCGGGGCATCCGCTGGCCGCCGAGCCGGAGCCGGTGCCGCC
GCACGTGTTGCGGCGTTACCGGGCGGTGGCGGTGGGGGACACCTCCCGCCGCCTGCCGGCCCGCACCGGCGGCCTGCTGG
AAGGGCAGCAGGTGCTGACCGTGCATAGCAGCCAGGCGAAATTGAAGGCCATCGTCGCCGGCCTCGGCACCGGCCACCTG
CCGCGTTCGCACGTGCGGGCGCACCTGGACAGCGGCGAGCTGGTGGAGAAGGCGGAGGAGGAGAGCGGCAGTTTTCCGCC
GATGTGCTTCGCCTGGAAGCAGGAACAGCCGGGACGGGCGATGCAGTGGTTCATCCAGCGGCTGGAGCTGGCGGTGGAGC
AAGGAGAGCTTTATATCTGA

Upstream 100 bases:

>100_bases
CTGGCTTCTTGCTACGGAGACCATTCTATTGCGGACGCTTCCTCGATAAAATCGGAAAGAACCGAACAAAGCATTCAAAA
AAATTGAATTAGGTGTGCGA

Downstream 100 bases:

>100_bases
GCATGCCGCCGCCACCGGGGCGGCGGCGGGACTGGGCTCAACCGTTGGACGGGATGGAATTGTTCTGCGGAATCATCGGC
GCGGGCTGGCCGTGCAGCTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKLTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLTPAGERLLKDGRHLLDAARQL
ELRVSKQAQGWEDRLRIVVGDLVGFEQLLPSIADFDRLQSDTRLHFIRESFGGIWDALYDDRADLVIGAPNQPPPGDYFT
RNIGDYDFVLVAAAGHPLAAEPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTGHL
PRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWFIQRLELAVEQGELYI

Sequences:

>Translated_299_residues
MKLTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLTPAGERLLKDGRHLLDAARQL
ELRVSKQAQGWEDRLRIVVGDLVGFEQLLPSIADFDRLQSDTRLHFIRESFGGIWDALYDDRADLVIGAPNQPPPGDYFT
RNIGDYDFVLVAAAGHPLAAEPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTGHL
PRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWFIQRLELAVEQGELYI
>Mature_299_residues
MKLTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLTPAGERLLKDGRHLLDAARQL
ELRVSKQAQGWEDRLRIVVGDLVGFEQLLPSIADFDRLQSDTRLHFIRESFGGIWDALYDDRADLVIGAPNQPPPGDYFT
RNIGDYDFVLVAAAGHPLAAEPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTGHL
PRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWFIQRLELAVEQGELYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=285, Percent_Identity=43.1578947368421, Blast_Score=230, Evalue=8e-62,
Organism=Escherichia coli, GI1789492, Length=290, Percent_Identity=41.0344827586207, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1787949, Length=285, Percent_Identity=35.7894736842105, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI1786713, Length=279, Percent_Identity=30.4659498207885, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1786508, Length=286, Percent_Identity=29.7202797202797, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI87082132, Length=301, Percent_Identity=25.5813953488372, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1790262, Length=184, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI145693193, Length=303, Percent_Identity=26.7326732673267, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789440, Length=265, Percent_Identity=26.7924528301887, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33020; Mature: 33020

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEECC
PAGERLLKDGRHLLDAARQLELRVSKQAQGWEDRLRIVVGDLVGFEQLLPSIADFDRLQS
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTRLHFIRESFGGIWDALYDDRADLVIGAPNQPPPGDYFTRNIGDYDFVLVAAAGHPLAA
CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCCCCEEEEEEECCCCCCC
EPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTGHL
CCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCC
PRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWFIQRLELAVEQGELYI
CHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLT
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEECC
PAGERLLKDGRHLLDAARQLELRVSKQAQGWEDRLRIVVGDLVGFEQLLPSIADFDRLQS
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTRLHFIRESFGGIWDALYDDRADLVIGAPNQPPPGDYFTRNIGDYDFVLVAAAGHPLAA
CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCCCCEEEEEEECCCCCCC
EPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTGHL
CCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCC
PRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWFIQRLELAVEQGELYI
CHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]