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The map label for this gene is yohK [H]

Identifier: 34499061

GI number: 34499061

Start: 3913011

End: 3913715

Strand: Reverse

Name: yohK [H]

Synonym: CV_3606

Alternate gene names: 34499061

Gene position: 3913715-3913011 (Counterclockwise)

Preceding gene: 34499062

Following gene: 34499060

Centisome position: 82.38

GC content: 71.77

Gene sequence:

>705_bases
TTGAGCGCCGCCTGGCTGGATTCGCCGCTGACCGGCGTCTTCGTCACGCTGCTGGCTTATCGGCTGGCGCTGGCGGGCCA
CCGCCGCTGCCATGGCCATCCGCTGGCCAACCCGGTGCTGCTGGGCGTGCTGCTGGTGCTGGCCTGGCTGTGGCTGAGCG
GCAGCAGCTATCAGCAGTACATGAATGGCGCCCGTTTCATCCAGCTGCTGCTGGGGCCGGCGACGGTGGCGCTGGCGGTG
CCCTTGTACGGCAACCTGGCGCGTTTGAAGAAAGCCGCCGCGCCGCTGTTGGCCAGCATCGCGATCGGCGGTCTGGTGGG
GATGGCCAGCGCGGCCGGCCTGGGATGGTGGCTGGGTCTCGACCAGCCGGTGCTGGTGGCGCTGTCCACCCGGGCGGTGA
CCACGCCGATCGCGATGAGCCTGGCCGGGGGCCTGGGCGGCTCGCCGGAGCTGGCGGCGATGTTCGTCATCGTGTCCGGC
ATCGTCGGCGCGGTGATGGCGCCGCCGCTGTTCAAGCTGCTGGGCTGGGACGACGACATGCTGCTGGGCGTGGCCACCGG
CGTGACCGCGCATGGCATCGGCACCGCCAGGCTGTTCCAGCTGTCCGAGGCGGCGGGCGCCTTCGCCGGCCTGGCGATGG
GGCTGAACGGGGTGTTCACCGCGTTGGCGCTGCCGTGGCTGGTGCGGGCGCTCGGGCTCGGTTAG

Upstream 100 bases:

>100_bases
CGCATGGCTGGCAGCTGGCGCTGATCCTGCTGGGCTCCACGCTGGCCACGCTGCTGGCTACCGGGCTGGTCCTGAAACTG
CTGCTGCGCGGGAGGCGGCA

Downstream 100 bases:

>100_bases
CATGCGGGGGCGCGGTTGGTTTGGCATGAAGACAAACCGCCGCGCGGTCGCATAAGGAGAATGATATGGATCTGATTTTG
TGGCGCCACGCCGAGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSAAWLDSPLTGVFVTLLAYRLALAGHRRCHGHPLANPVLLGVLLVLAWLWLSGSSYQQYMNGARFIQLLLGPATVALAV
PLYGNLARLKKAAAPLLASIAIGGLVGMASAAGLGWWLGLDQPVLVALSTRAVTTPIAMSLAGGLGGSPELAAMFVIVSG
IVGAVMAPPLFKLLGWDDDMLLGVATGVTAHGIGTARLFQLSEAAGAFAGLAMGLNGVFTALALPWLVRALGLG

Sequences:

>Translated_234_residues
MSAAWLDSPLTGVFVTLLAYRLALAGHRRCHGHPLANPVLLGVLLVLAWLWLSGSSYQQYMNGARFIQLLLGPATVALAV
PLYGNLARLKKAAAPLLASIAIGGLVGMASAAGLGWWLGLDQPVLVALSTRAVTTPIAMSLAGGLGGSPELAAMFVIVSG
IVGAVMAPPLFKLLGWDDDMLLGVATGVTAHGIGTARLFQLSEAAGAFAGLAMGLNGVFTALALPWLVRALGLG
>Mature_233_residues
SAAWLDSPLTGVFVTLLAYRLALAGHRRCHGHPLANPVLLGVLLVLAWLWLSGSSYQQYMNGARFIQLLLGPATVALAVP
LYGNLARLKKAAAPLLASIAIGGLVGMASAAGLGWWLGLDQPVLVALSTRAVTTPIAMSLAGGLGGSPELAAMFVIVSGI
VGAVMAPPLFKLLGWDDDMLLGVATGVTAHGIGTARLFQLSEAAGAFAGLAMGLNGVFTALALPWLVRALGLG

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=227, Percent_Identity=33.920704845815, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 23914; Mature: 23783

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAWLDSPLTGVFVTLLAYRLALAGHRRCHGHPLANPVLLGVLLVLAWLWLSGSSYQQY
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
MNGARFIQLLLGPATVALAVPLYGNLARLKKAAAPLLASIAIGGLVGMASAAGLGWWLGL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
DQPVLVALSTRAVTTPIAMSLAGGLGGSPELAAMFVIVSGIVGAVMAPPLFKLLGWDDDM
CCHHEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LLGVATGVTAHGIGTARLFQLSEAAGAFAGLAMGLNGVFTALALPWLVRALGLG
HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAAWLDSPLTGVFVTLLAYRLALAGHRRCHGHPLANPVLLGVLLVLAWLWLSGSSYQQY
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
MNGARFIQLLLGPATVALAVPLYGNLARLKKAAAPLLASIAIGGLVGMASAAGLGWWLGL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
DQPVLVALSTRAVTTPIAMSLAGGLGGSPELAAMFVIVSGIVGAVMAPPLFKLLGWDDDM
CCHHEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LLGVATGVTAHGIGTARLFQLSEAAGAFAGLAMGLNGVFTALALPWLVRALGLG
HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]