| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yaeR [C]
Identifier: 34499049
GI number: 34499049
Start: 3902689
End: 3903189
Strand: Reverse
Name: yaeR [C]
Synonym: CV_3594
Alternate gene names: 34499049
Gene position: 3903189-3902689 (Counterclockwise)
Preceding gene: 34499051
Following gene: 34499043
Centisome position: 82.15
GC content: 66.67
Gene sequence:
>501_bases ATGGGCATCAAACGACTCAATCATGCCGTGCTCTACGTCAGCGACGTGGCTGACAGCGCGGCTTTCTACCGCGACGTGCT GGGCTTCCGCCCCAAAGGCGACGCGGCATCCGGCCGCGCCGTGTTCGCGCAGGCGGCGCATTCCGACAACGACCATGATC TGGCCTTGTTCCAGCGCAATCTGGGCCAGCAGCGTTCGGGCCCCTTCAGTCCGCGCGGAGAGACGCCGGATCCGCACCAG CCCAGGGCAGGTCTGTACCATCTGGCCTGGGAGGTGGATACCATCCAGGAATTGAAGCGGATTCGCGACCATCTGGCCGA GATCGGCAAGCTGGGCATGGAGGAGGACCACGGCGTGCACAAGAGCGTGTACGGCCACGATCCGGACGGCTTGCTGTTCG AGGTGTGCTGGTTCGTGCCCGAGGACAGGATGGACGCGCGCGACCGCGAGCCCGGCGACGGCCGGCTGGATTGGGCGCGC GAGCTGGCGCGCTTCGCCTGA
Upstream 100 bases:
>100_bases TAATAATAAACCATTTATAAAGTTTTTTATTTATGTTTTAAATTGCGCCGCTCCTCCCAATTTTCCAGGCGCGGCGGCGA CTTTCGAAACCAGGTGATCG
Downstream 100 bases:
>100_bases GGCCCAGGGGCTGTTGACGTTTGCCGAGCGGTCGCGCCGGGATGCGTTTTGCGGCGAATCCAGGCGTTTCGCGCGCCGCA TAGTCATGCTCTGCCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MGIKRLNHAVLYVSDVADSAAFYRDVLGFRPKGDAASGRAVFAQAAHSDNDHDLALFQRNLGQQRSGPFSPRGETPDPHQ PRAGLYHLAWEVDTIQELKRIRDHLAEIGKLGMEEDHGVHKSVYGHDPDGLLFEVCWFVPEDRMDARDREPGDGRLDWAR ELARFA
Sequences:
>Translated_166_residues MGIKRLNHAVLYVSDVADSAAFYRDVLGFRPKGDAASGRAVFAQAAHSDNDHDLALFQRNLGQQRSGPFSPRGETPDPHQ PRAGLYHLAWEVDTIQELKRIRDHLAEIGKLGMEEDHGVHKSVYGHDPDGLLFEVCWFVPEDRMDARDREPGDGRLDWAR ELARFA >Mature_165_residues GIKRLNHAVLYVSDVADSAAFYRDVLGFRPKGDAASGRAVFAQAAHSDNDHDLALFQRNLGQQRSGPFSPRGETPDPHQP RAGLYHLAWEVDTIQELKRIRDHLAEIGKLGMEEDHGVHKSVYGHDPDGLLFEVCWFVPEDRMDARDREPGDGRLDWARE LARFA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18714; Mature: 18583
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKRLNHAVLYVSDVADSAAFYRDVLGFRPKGDAASGRAVFAQAAHSDNDHDLALFQRN CCCCHHHHEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LGQQRSGPFSPRGETPDPHQPRAGLYHLAWEVDTIQELKRIRDHLAEIGKLGMEEDHGVH HCCCCCCCCCCCCCCCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KSVYGHDPDGLLFEVCWFVPEDRMDARDREPGDGRLDWARELARFA CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure GIKRLNHAVLYVSDVADSAAFYRDVLGFRPKGDAASGRAVFAQAAHSDNDHDLALFQRN CCCHHHHEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LGQQRSGPFSPRGETPDPHQPRAGLYHLAWEVDTIQELKRIRDHLAEIGKLGMEEDHGVH HCCCCCCCCCCCCCCCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KSVYGHDPDGLLFEVCWFVPEDRMDARDREPGDGRLDWARELARFA CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA