| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499040
Identifier: 34499040
GI number: 34499040
Start: 3892872
End: 3894311
Strand: Reverse
Name: 34499040
Synonym: CV_3585
Alternate gene names: NA
Gene position: 3894311-3892872 (Counterclockwise)
Preceding gene: 34499041
Following gene: 34499039
Centisome position: 81.97
GC content: 66.88
Gene sequence:
>1440_bases ATGACGGTTGCCTACAAGCAACAATCCGCCGATCGTCTGCAGGAAAGCCTGGGCCTGGTGCAGCGCCTGATCGAGCGCCA GCGCCAGCTTGAACATCTTGCCACGCGTCCGGACGCGGTCGAAACGGCCGCCGATCCCCTGGCGCTGCAACACAATCTGC AGGAACTGGGACACAAGCTGTCCCAGCTGCACCCGGCCGACATCGCCCACGTGCTGGAGGCGCTGCCGCTGGAAGACCGG CTGCTGGCCTGGGACCTGACCGATCCCTCGCGGGACGGTTCGGTGCTGCTGGAAGTCTCCGACGCGGTGCGCGAGTCGCT GATCGAAGTGATGGAGCCCGACGAGCTGGTGGCGGCGCTGGACGAACTGGACGCGGACGAGCTGGCCGAGCTGGCGCCCG ACCTGCCGCGCCAGGTGGTGTACGAGGCCATGGGCCGGCTGGACGAGGAAGAGCGCGGCCAGCTGCAGTCCGTGCTGTCC TACGACGACGACCGCGTCGGCGCGCTGATGGATTTCGAGCTGGTGAAGATCCGCGCCGACGTCAGCTGCGAGGTGGTGCT GCGCTATCTGCGCCGCTTCGACGAGTTGCCCGGCCAGACCGACAAGATCTTCGTCACCGACGAAGCCGGGCTGCTCAAGG GCGTGCTGTCGGTGCGCAAGCTGCTGGTGTCCGATCCGGACACGCTGGTGGCGGAGGCGATGGCCACCGAGGTGGTGAGC TTCCATCCCGACGAGCCGGCGGTGGACGCCGCCCAGGCCTTTGAACGCTACGATCTGGTCAGCGCGCCGGTGGTGGACGA GCGCGGCGCGCTGCTGGGCCGGTTGACCGTGGACGCGATGGTGGATGTGATCCGCGAGGAATCTGACAGCGAGATGCTGA ATCTGGCGGGTCTGAAGGAAGAGGAGGACCTGTTCGCGCCGGTGATCGACTCGGTGAAGAACCGCTGGTCCTGGCTGGCG ATCAACCTTTGCACCGCCTTTTTCGCCTCCCGCGTGATCGGCGCGTTCGAGCATTCCATCGCACAATTGGTGGCGCTGGC GGCGCTGATGCCCATCGTCGCCGGCATAGGCGGCAATTCGGGCAACCAGACCATTACCATGATCGTGCGCGCGCTGGCCA TGGGCCAGATGCAGCTTGGCCAGGCCGGCCGCCTGTGGCGCAAGGAGCTGGGCGTCAGCGTGATCAACGGCATGGTCTGG GGCGGCGTCATCGGCGCGGTGGCGTGGCTGCTGTACGGCAGCGTGTCGCTGGGCCTGGTGATGCTGGCGGCGATGACGCT GAACCTGATGCTGGCCGCCACCATGGGGGTGATGATCCCGACGCTGATGCAGAAGCTGGGCAAGGACCCGGCGCTGGGCT CCAGCGTGCTGATCACCGCCTGCACCGACTCCGGCGGCTTCCTGATTTTCCTGGGGCTGGCCACCCTGTTCCTGCTGTAA
Upstream 100 bases:
>100_bases TTACCCAGTTATCCCTTAATCCAATCCCGTATCACTCTATAAAAACCCGCCTCACACCGTCGGCCCCCTTCGCGCGCCCA GTGGGCGGAAGGAGACGTGC
Downstream 100 bases:
>100_bases TAGAACCATGCCGACCATAGAACAGGCGCTGCGGCGCCACCCCTTGCCCAGGCTGGAGTCCAGGATGCTGCTGACGCAGG CCTGGCCCGGCCTGACCCAC
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MTVAYKQQSADRLQESLGLVQRLIERQRQLEHLATRPDAVETAADPLALQHNLQELGHKLSQLHPADIAHVLEALPLEDR LLAWDLTDPSRDGSVLLEVSDAVRESLIEVMEPDELVAALDELDADELAELAPDLPRQVVYEAMGRLDEEERGQLQSVLS YDDDRVGALMDFELVKIRADVSCEVVLRYLRRFDELPGQTDKIFVTDEAGLLKGVLSVRKLLVSDPDTLVAEAMATEVVS FHPDEPAVDAAQAFERYDLVSAPVVDERGALLGRLTVDAMVDVIREESDSEMLNLAGLKEEEDLFAPVIDSVKNRWSWLA INLCTAFFASRVIGAFEHSIAQLVALAALMPIVAGIGGNSGNQTITMIVRALAMGQMQLGQAGRLWRKELGVSVINGMVW GGVIGAVAWLLYGSVSLGLVMLAAMTLNLMLAATMGVMIPTLMQKLGKDPALGSSVLITACTDSGGFLIFLGLATLFLL
Sequences:
>Translated_479_residues MTVAYKQQSADRLQESLGLVQRLIERQRQLEHLATRPDAVETAADPLALQHNLQELGHKLSQLHPADIAHVLEALPLEDR LLAWDLTDPSRDGSVLLEVSDAVRESLIEVMEPDELVAALDELDADELAELAPDLPRQVVYEAMGRLDEEERGQLQSVLS YDDDRVGALMDFELVKIRADVSCEVVLRYLRRFDELPGQTDKIFVTDEAGLLKGVLSVRKLLVSDPDTLVAEAMATEVVS FHPDEPAVDAAQAFERYDLVSAPVVDERGALLGRLTVDAMVDVIREESDSEMLNLAGLKEEEDLFAPVIDSVKNRWSWLA INLCTAFFASRVIGAFEHSIAQLVALAALMPIVAGIGGNSGNQTITMIVRALAMGQMQLGQAGRLWRKELGVSVINGMVW GGVIGAVAWLLYGSVSLGLVMLAAMTLNLMLAATMGVMIPTLMQKLGKDPALGSSVLITACTDSGGFLIFLGLATLFLL >Mature_478_residues TVAYKQQSADRLQESLGLVQRLIERQRQLEHLATRPDAVETAADPLALQHNLQELGHKLSQLHPADIAHVLEALPLEDRL LAWDLTDPSRDGSVLLEVSDAVRESLIEVMEPDELVAALDELDADELAELAPDLPRQVVYEAMGRLDEEERGQLQSVLSY DDDRVGALMDFELVKIRADVSCEVVLRYLRRFDELPGQTDKIFVTDEAGLLKGVLSVRKLLVSDPDTLVAEAMATEVVSF HPDEPAVDAAQAFERYDLVSAPVVDERGALLGRLTVDAMVDVIREESDSEMLNLAGLKEEEDLFAPVIDSVKNRWSWLAI NLCTAFFASRVIGAFEHSIAQLVALAALMPIVAGIGGNSGNQTITMIVRALAMGQMQLGQAGRLWRKELGVSVINGMVWG GVIGAVAWLLYGSVSLGLVMLAAMTLNLMLAATMGVMIPTLMQKLGKDPALGSSVLITACTDSGGFLIFLGLATLFLL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 52103; Mature: 51972
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAYKQQSADRLQESLGLVQRLIERQRQLEHLATRPDAVETAADPLALQHNLQELGHKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHH SQLHPADIAHVLEALPLEDRLLAWDLTDPSRDGSVLLEVSDAVRESLIEVMEPDELVAAL HHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCHHHHHHHH DELDADELAELAPDLPRQVVYEAMGRLDEEERGQLQSVLSYDDDRVGALMDFELVKIRAD HHCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC VSCEVVLRYLRRFDELPGQTDKIFVTDEAGLLKGVLSVRKLLVSDPDTLVAEAMATEVVS CCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FHPDEPAVDAAQAFERYDLVSAPVVDERGALLGRLTVDAMVDVIREESDSEMLNLAGLKE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC EEDLFAPVIDSVKNRWSWLAINLCTAFFASRVIGAFEHSIAQLVALAALMPIVAGIGGNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNQTITMIVRALAMGQMQLGQAGRLWRKELGVSVINGMVWGGVIGAVAWLLYGSVSLGLV CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAAMTLNLMLAATMGVMIPTLMQKLGKDPALGSSVLITACTDSGGFLIFLGLATLFLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHC >Mature Secondary Structure TVAYKQQSADRLQESLGLVQRLIERQRQLEHLATRPDAVETAADPLALQHNLQELGHKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHH SQLHPADIAHVLEALPLEDRLLAWDLTDPSRDGSVLLEVSDAVRESLIEVMEPDELVAAL HHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCHHHHHHHH DELDADELAELAPDLPRQVVYEAMGRLDEEERGQLQSVLSYDDDRVGALMDFELVKIRAD HHCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC VSCEVVLRYLRRFDELPGQTDKIFVTDEAGLLKGVLSVRKLLVSDPDTLVAEAMATEVVS CCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FHPDEPAVDAAQAFERYDLVSAPVVDERGALLGRLTVDAMVDVIREESDSEMLNLAGLKE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC EEDLFAPVIDSVKNRWSWLAINLCTAFFASRVIGAFEHSIAQLVALAALMPIVAGIGGNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNQTITMIVRALAMGQMQLGQAGRLWRKELGVSVINGMVWGGVIGAVAWLLYGSVSLGLV CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAAMTLNLMLAATMGVMIPTLMQKLGKDPALGSSVLITACTDSGGFLIFLGLATLFLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA