| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499000
Identifier: 34499000
GI number: 34499000
Start: 3852781
End: 3853164
Strand: Reverse
Name: 34499000
Synonym: CV_3545
Alternate gene names: NA
Gene position: 3853164-3852781 (Counterclockwise)
Preceding gene: 34499001
Following gene: 34498999
Centisome position: 81.1
GC content: 52.34
Gene sequence:
>384_bases ATGTCATGTTTTGGCAAGCGCAGCGAGGAGCTTTTGGTCGGCGTGCATGTGGATTTGGTCATGGTGGCGAGAAGGGCAAA GGCAATCGCCAGTTTGGACTTCATTGTCATCGAGGGGGTGCGCAGCATCATTCGCCAAAAAGAGTTGGTTGGGCAAGGAG CAAGCCGCACGATGAATAGCCGTCATCTGACGGGGCATGCGATTGACTTGGCTCCATGGATGGATGGCGCTATTCCTTGG GAAAATTGGCCTGCATTTGAAGAGGTGGGGCTTGCCATGAAGAAGGCTGCTTCGGAATTGAAAATTCCAATCGTGTGGGG TGGAGATTGGAAGAACTTCAGGGATGGCCCGCATTTTGAATTGCCGCGAGTGTATTATCCGTGA
Upstream 100 bases:
>100_bases ACCTTGGCAATCGCAGGCTTGTTTGGCGCGATGGGCAATACCGCGTTAAGTTATATTTGGCAGAAAATTCTTAGTATGGC TGCTAAATGATGGGGGTGTC
Downstream 100 bases:
>100_bases CTGGGTTGTTGGGCCGGGGTGGCGCAGCATTGATCCGTCTGGGCGAGGATGTTCCGAGGCGATCGCTCCGGCGAAGAGCC GAGATTCTCGTTCGCTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Protein; Bacteriophage P7 Related Protein; Phagelysin; Phage Protein; Lysozyme; Endolysin; Phage Capsid Scaffolding Protein; Peptidase
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSCFGKRSEELLVGVHVDLVMVARRAKAIASLDFIVIEGVRSIIRQKELVGQGASRTMNSRHLTGHAIDLAPWMDGAIPW ENWPAFEEVGLAMKKAASELKIPIVWGGDWKNFRDGPHFELPRVYYP
Sequences:
>Translated_127_residues MSCFGKRSEELLVGVHVDLVMVARRAKAIASLDFIVIEGVRSIIRQKELVGQGASRTMNSRHLTGHAIDLAPWMDGAIPW ENWPAFEEVGLAMKKAASELKIPIVWGGDWKNFRDGPHFELPRVYYP >Mature_126_residues SCFGKRSEELLVGVHVDLVMVARRAKAIASLDFIVIEGVRSIIRQKELVGQGASRTMNSRHLTGHAIDLAPWMDGAIPWE NWPAFEEVGLAMKKAASELKIPIVWGGDWKNFRDGPHFELPRVYYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14286; Mature: 14155
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCFGKRSEELLVGVHVDLVMVARRAKAIASLDFIVIEGVRSIIRQKELVGQGASRTMNS CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RHLTGHAIDLAPWMDGAIPWENWPAFEEVGLAMKKAASELKIPIVWGGDWKNFRDGPHFE CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCC LPRVYYP CCCCCCC >Mature Secondary Structure SCFGKRSEELLVGVHVDLVMVARRAKAIASLDFIVIEGVRSIIRQKELVGQGASRTMNS CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RHLTGHAIDLAPWMDGAIPWENWPAFEEVGLAMKKAASELKIPIVWGGDWKNFRDGPHFE CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCC LPRVYYP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA