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The map label for this gene is 34498995

Identifier: 34498995

GI number: 34498995

Start: 3848693

End: 3849475

Strand: Reverse

Name: 34498995

Synonym: CV_3540

Alternate gene names: NA

Gene position: 3849475-3848693 (Counterclockwise)

Preceding gene: 34498996

Following gene: 34498994

Centisome position: 81.02

GC content: 62.2

Gene sequence:

>783_bases
GTGGACGCAGATCATAGAGGACAGGAAATCATGACGTCATGGCGGGGGAGATTGGCTGGATGGCTGTTGGCATTTGGCGT
AATCGCCCCCGCCGCGGCGGATGGCAGCAATCCGTCGGAAGTGGCGAGGATCCGCAGCCAGCTGGCGGTGGAGTACTCCA
GGATAGGCAATCTGAAGTCCGCGCTGGACAACGCCAACCAGGCGGTCCAGGCGGATCCCGCCTACATCACCGGCTACCTG
AGCCGAGCCTACGTGCTGGGCCTGCTGCAGATGGACGACAAGGCGGAGCAGGACTACCAGCAGGCATTGAAGCTGGATCC
GGCCAACCCGCAGGTCAACAATAATTACGGCCTGTTCCTGTGCGAGCATGGACGGCCGCAGGATTCGCTGGCTTTGTTCC
AGAAAGCGCTGGCCAACCCGTTGTATGATTCGCCGCAATCGGCGTATCTGAACCTCGGCCGTTGCAGCGCCAAGCTGGGG
CGGACCGACCAGGCGAACGACTATTTGCTGAGCGCCTTGCGCGTGGCGCCGAATTACGCGCCCGCCTTGAGCGAACTGGC
AGAAATGCAACTGGGCCTGGGCAATGCCAAGTTGGCGGCGTTCTATTTCGAACGGCTGCGCAGCGGCGGCGGAATGAACG
GCCTGGGCGCCGCCGAGCTGTGGCTGGGCGCCAGGATCGCCCGCAAAACCGGTAACGCCGCGCTGGAGCGCGCGTGCGGA
AATGAACTAAAGAACCGGTTTCCGGACTCTAGGGAAACACAACTGCTGTTGAGTGGAAGCTGA

Upstream 100 bases:

>100_bases
GTTACGTGGTGACCGTGCGCAAGACCCGCGGCGACGATATCGACGCGGCCTGCGGCCAGCTGGCCGGCCAGGTGCAGGAC
AAGACGCGGCGCCAGGCCAA

Downstream 100 bases:

>100_bases
GGATGGAAGAAAAACACGAATATCATGACGCGCCGGGGCACGGCGACATCGGCGCCACCTTGAAAGCCGCTCGCGAGGCG
GCCGGTTTGGGCCTGGGGGA

Product: fimbrial biogenesis and twitching motility protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Fimbrial Biogenesis And Twitching Motility Protein; Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis Protein PilF; Type 4 Fimbrial Biogenesis Protein; Type 4 Fimbrial Biogenesis Protein PilF; Tfp Pilus Assembly Protein PilF; PilF Type IV Pilus Assembly Protein; Type IV Pili Biogenesis Protein PilF; Type IV Pilus Assembly Protein PilF; TPR Repeat-Containing Pilus Assembly Protein PilF; Type Iv Pilus Biogenesis/Stability Protein Pilw; Type IV Fimbrial Biogenesis Protein; Tpr Repeat Protein; LysM Domain-Containing Protein; Protein Involved In Fimbrial Biogenesis; Type 4 Pilus Biogenesis Protein; TPR Domain-Containing Protein; Type IV Pilus Biogenesis Protein Pilf; Lipoprotein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDADHRGQEIMTSWRGRLAGWLLAFGVIAPAAADGSNPSEVARIRSQLAVEYSRIGNLKSALDNANQAVQADPAYITGYL
SRAYVLGLLQMDDKAEQDYQQALKLDPANPQVNNNYGLFLCEHGRPQDSLALFQKALANPLYDSPQSAYLNLGRCSAKLG
RTDQANDYLLSALRVAPNYAPALSELAEMQLGLGNAKLAAFYFERLRSGGGMNGLGAAELWLGARIARKTGNAALERACG
NELKNRFPDSRETQLLLSGS

Sequences:

>Translated_260_residues
MDADHRGQEIMTSWRGRLAGWLLAFGVIAPAAADGSNPSEVARIRSQLAVEYSRIGNLKSALDNANQAVQADPAYITGYL
SRAYVLGLLQMDDKAEQDYQQALKLDPANPQVNNNYGLFLCEHGRPQDSLALFQKALANPLYDSPQSAYLNLGRCSAKLG
RTDQANDYLLSALRVAPNYAPALSELAEMQLGLGNAKLAAFYFERLRSGGGMNGLGAAELWLGARIARKTGNAALERACG
NELKNRFPDSRETQLLLSGS
>Mature_260_residues
MDADHRGQEIMTSWRGRLAGWLLAFGVIAPAAADGSNPSEVARIRSQLAVEYSRIGNLKSALDNANQAVQADPAYITGYL
SRAYVLGLLQMDDKAEQDYQQALKLDPANPQVNNNYGLFLCEHGRPQDSLALFQKALANPLYDSPQSAYLNLGRCSAKLG
RTDQANDYLLSALRVAPNYAPALSELAEMQLGLGNAKLAAFYFERLRSGGGMNGLGAAELWLGARIARKTGNAALERACG
NELKNRFPDSRETQLLLSGS

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28165; Mature: 28165

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDADHRGQEIMTSWRGRLAGWLLAFGVIAPAAADGSNPSEVARIRSQLAVEYSRIGNLKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH
ALDNANQAVQADPAYITGYLSRAYVLGLLQMDDKAEQDYQQALKLDPANPQVNNNYGLFL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
CEHGRPQDSLALFQKALANPLYDSPQSAYLNLGRCSAKLGRTDQANDYLLSALRVAPNYA
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PALSELAEMQLGLGNAKLAAFYFERLRSGGGMNGLGAAELWLGARIARKTGNAALERACG
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
NELKNRFPDSRETQLLLSGS
HHHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MDADHRGQEIMTSWRGRLAGWLLAFGVIAPAAADGSNPSEVARIRSQLAVEYSRIGNLKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH
ALDNANQAVQADPAYITGYLSRAYVLGLLQMDDKAEQDYQQALKLDPANPQVNNNYGLFL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
CEHGRPQDSLALFQKALANPLYDSPQSAYLNLGRCSAKLGRTDQANDYLLSALRVAPNYA
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PALSELAEMQLGLGNAKLAAFYFERLRSGGGMNGLGAAELWLGARIARKTGNAALERACG
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
NELKNRFPDSRETQLLLSGS
HHHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA