| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yeaZ [C]
Identifier: 34498907
GI number: 34498907
Start: 3749608
End: 3750279
Strand: Direct
Name: yeaZ [C]
Synonym: CV_3452
Alternate gene names: 34498907
Gene position: 3749608-3750279 (Clockwise)
Preceding gene: 34498906
Following gene: 34498908
Centisome position: 78.92
GC content: 68.6
Gene sequence:
>672_bases ATGAAACTGTTAGCCCTGGACACCTCCACCACCTATCTGTCGCTGGCCCTGAGCGTCGGCGGCGACACGCTCGCCTTCCA CCAGTGCGTGGAACAGAAGCATGCCGAACGCACGCTGCCAGAAGTGTCGCGCCTGCTCGCCGAAGCCGGCGTCGCGCTGG GCGAGCTGGATGGCATCGTGTTCGGACAGGGTCCCGGCTCATTCACCGGACTGCGCATCGCTTGCGGCATCGCCCAAGGC CTGGCCTACTCCGCCGACCTGCCCGTCACCGCTATTCCGACGCTGGACAACCTTGCCTGGCAGGCTGGCGAAGGTGTGGT CCAGGTCTGTTTCGACGCCCGCATGCAACAGGTTTACAGCGCGCTGTACCGCACCGGCGCCGACTGGGAACGGCTAGGCC CGATCTCCGTCGTCTCGCCCGAGGACGTGCGCCTGCCGGAAGACGCCACGCTGCTGGCCGGCGACGGCTTCGACAGCTAC CCGCAACTGCTGGCCGACGCGCGCCGGGCGCTGCCGCTGTCGCCGCACCCGCGCCCGCACGCCGCCGCCTACATCCGCCT GGCCGAAAGCGGCCGCTATCCGGCGCGACATCCGCGCGAAGCCGAGCTGCTCTATGTGCGCAACAAGGTGGCGCTGACCT CGGTCGAACAACAGCAGGCGCGCAGCCGATGA
Upstream 100 bases:
>100_bases GCCTGTCCAGCGAGCAGCTGAACCAGGCCCACATCTCCGCGCTCGCCTGGGTGGAGGAACTCGGCTTATAATTCCCAGCC TTGCAAGCGCATCAAACCCA
Downstream 100 bases:
>100_bases GCACGGTCCGCCTGTTCAGGCCCGCCGATCCCCAGCCGCTGGCCGATCTGGAGCAACAGGCCACGCCGCACCCATGGCGC GTCGGCCAGTACCGCGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKLLALDTSTTYLSLALSVGGDTLAFHQCVEQKHAERTLPEVSRLLAEAGVALGELDGIVFGQGPGSFTGLRIACGIAQG LAYSADLPVTAIPTLDNLAWQAGEGVVQVCFDARMQQVYSALYRTGADWERLGPISVVSPEDVRLPEDATLLAGDGFDSY PQLLADARRALPLSPHPRPHAAAYIRLAESGRYPARHPREAELLYVRNKVALTSVEQQQARSR
Sequences:
>Translated_223_residues MKLLALDTSTTYLSLALSVGGDTLAFHQCVEQKHAERTLPEVSRLLAEAGVALGELDGIVFGQGPGSFTGLRIACGIAQG LAYSADLPVTAIPTLDNLAWQAGEGVVQVCFDARMQQVYSALYRTGADWERLGPISVVSPEDVRLPEDATLLAGDGFDSY PQLLADARRALPLSPHPRPHAAAYIRLAESGRYPARHPREAELLYVRNKVALTSVEQQQARSR >Mature_223_residues MKLLALDTSTTYLSLALSVGGDTLAFHQCVEQKHAERTLPEVSRLLAEAGVALGELDGIVFGQGPGSFTGLRIACGIAQG LAYSADLPVTAIPTLDNLAWQAGEGVVQVCFDARMQQVYSALYRTGADWERLGPISVVSPEDVRLPEDATLLAGDGFDSY PQLLADARRALPLSPHPRPHAAAYIRLAESGRYPARHPREAELLYVRNKVALTSVEQQQARSR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=228, Percent_Identity=34.6491228070175, Blast_Score=107, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 24065; Mature: 24065
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLALDTSTTYLSLALSVGGDTLAFHQCVEQKHAERTLPEVSRLLAEAGVALGELDGIV CEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCEE FGQGPGSFTGLRIACGIAQGLAYSADLPVTAIPTLDNLAWQAGEGVVQVCFDARMQQVYS EECCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHH ALYRTGADWERLGPISVVSPEDVRLPEDATLLAGDGFDSYPQLLADARRALPLSPHPRPH HHHHCCCCHHHCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC AAAYIRLAESGRYPARHPREAELLYVRNKVALTSVEQQQARSR HHEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCC >Mature Secondary Structure MKLLALDTSTTYLSLALSVGGDTLAFHQCVEQKHAERTLPEVSRLLAEAGVALGELDGIV CEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCEE FGQGPGSFTGLRIACGIAQGLAYSADLPVTAIPTLDNLAWQAGEGVVQVCFDARMQQVYS EECCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHH ALYRTGADWERLGPISVVSPEDVRLPEDATLLAGDGFDSYPQLLADARRALPLSPHPRPH HHHHCCCCHHHCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCC AAAYIRLAESGRYPARHPREAELLYVRNKVALTSVEQQQARSR HHEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]