| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is cheZ [H]
Identifier: 34498904
GI number: 34498904
Start: 3745773
End: 3746396
Strand: Direct
Name: cheZ [H]
Synonym: CV_3449
Alternate gene names: 34498904
Gene position: 3745773-3746396 (Clockwise)
Preceding gene: 34498903
Following gene: 34498905
Centisome position: 78.84
GC content: 57.37
Gene sequence:
>624_bases TTGTTCTCGAGCGAGACCAATCCTTCGACGATGTATGAGCACATTGGACAGATGACCCGCAAGATGCACGACGCCCTGCG CGATCTGGGGTACGACAAGTCGCTGGAAAAAGTGGCCGAAACCATCCCCGACGCCAAGGATCGGCTGGCCTATATCGCCA CGCTGACGGAAAACTCCGCCGAGCGGGTGCTGAACGCCACCGATATCGCCAAGCCGTTTCAGGACAAGCTGGAAAGCCAG GCCCAGGCACTCAGCGAGCGCTGGGAAAAACTGTACGCCAACCTGCTGAGCGTGGAAGAATTCAAGCGCTTGGCGGAAGA AACCCGGCAGTACCTCAAGGATGTGCCGAACCAGACCCAGGCCACCAATACCCAGTTGCTCGAGATCGTGATGGCGCAGG ACTTCCAGGACCTGACCGGCCAAGTGATCAAGAAAATGATGGGCATGGTCAAGATCCTGGAAACCGAACTAGTCAATTTC CTGATCGAGTTCTCCCCCGACGACAAGAAGGGCGAACTGAATACCAGCTTGCTGAACGGCCCGGTCATCAATCCGGAAGG CAAGACCGACGTGGTCACCAGCCAGCAGCAGGTGGACGACCTGCTGGAAAGCCTCGGCTTCTAA
Upstream 100 bases:
>100_bases ACTGGAGGCGTTGTTCGACAGCATCGCCCAGCAGCAGGATAGCGAACCCGAGCCGCCTGCCGCCGCGGCAGCACCGGCCG GCCAAGAGGCCGGCGCCAAA
Downstream 100 bases:
>100_bases AGCAACGCAAGCAAGACAACGCAGAACGGGTGGGGTGAAATATGAGCGAATTTGGCGGCATGGAAGAGTTGCTTCAGGAC TTCCTGATGGAGTCCACCGA
Product: chemotaxis regulator CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MFSSETNPSTMYEHIGQMTRKMHDALRDLGYDKSLEKVAETIPDAKDRLAYIATLTENSAERVLNATDIAKPFQDKLESQ AQALSERWEKLYANLLSVEEFKRLAEETRQYLKDVPNQTQATNTQLLEIVMAQDFQDLTGQVIKKMMGMVKILETELVNF LIEFSPDDKKGELNTSLLNGPVINPEGKTDVVTSQQQVDDLLESLGF
Sequences:
>Translated_207_residues MFSSETNPSTMYEHIGQMTRKMHDALRDLGYDKSLEKVAETIPDAKDRLAYIATLTENSAERVLNATDIAKPFQDKLESQ AQALSERWEKLYANLLSVEEFKRLAEETRQYLKDVPNQTQATNTQLLEIVMAQDFQDLTGQVIKKMMGMVKILETELVNF LIEFSPDDKKGELNTSLLNGPVINPEGKTDVVTSQQQVDDLLESLGF >Mature_207_residues MFSSETNPSTMYEHIGQMTRKMHDALRDLGYDKSLEKVAETIPDAKDRLAYIATLTENSAERVLNATDIAKPFQDKLESQ AQALSERWEKLYANLLSVEEFKRLAEETRQYLKDVPNQTQATNTQLLEIVMAQDFQDLTGQVIKKMMGMVKILETELVNF LIEFSPDDKKGELNTSLLNGPVINPEGKTDVVTSQQQVDDLLESLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=207, Percent_Identity=46.3768115942029, Blast_Score=185, Evalue=2e-48,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 23465; Mature: 23465
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSETNPSTMYEHIGQMTRKMHDALRDLGYDKSLEKVAETIPDAKDRLAYIATLTENSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH ERVLNATDIAKPFQDKLESQAQALSERWEKLYANLLSVEEFKRLAEETRQYLKDVPNQTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ATNTQLLEIVMAQDFQDLTGQVIKKMMGMVKILETELVNFLIEFSPDDKKGELNTSLLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC PVINPEGKTDVVTSQQQVDDLLESLGF CCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSSETNPSTMYEHIGQMTRKMHDALRDLGYDKSLEKVAETIPDAKDRLAYIATLTENSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH ERVLNATDIAKPFQDKLESQAQALSERWEKLYANLLSVEEFKRLAEETRQYLKDVPNQTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ATNTQLLEIVMAQDFQDLTGQVIKKMMGMVKILETELVNFLIEFSPDDKKGELNTSLLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC PVINPEGKTDVVTSQQQVDDLLESLGF CCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]