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The map label for this gene is 34498852

Identifier: 34498852

GI number: 34498852

Start: 3691648

End: 3692865

Strand: Reverse

Name: 34498852

Synonym: CV_3397

Alternate gene names: NA

Gene position: 3692865-3691648 (Counterclockwise)

Preceding gene: 34498854

Following gene: 34498851

Centisome position: 77.73

GC content: 63.88

Gene sequence:

>1218_bases
TTGTCTCTAGTTACTGGACGCATCGAATACATGAACCTGAACTGGCTCAACGGTCTGCTGGATCTGCCTTGGTGGGGCAA
TATCATCGCCGCCCTGATCCTGACCCACATCACCATTGCCTCGGTCACCATTTTCCTGCATCGCCACCAGGCCCACCGCG
CGCTGGACCTGCACCCGATTCCCAGCCATTTCTTCCGCTTCTGGCTGTGGCTGACCACCGGCATGGTCACCAAGCAGTGG
GCGGCCATCCACCGCAAGCACCACGCGCGCTGCGAAACGCAGGAAGACCCGCATAGCCCGCAGGTGCTCGGCATCAAGAA
GGTGCTGTGGGAAGGGGCCGAGCTGTATCGCGCCGCCTGCAAGGACCAGTCCATCATGGACAAGTTCGGCCACGGCACGC
CGGACGACTGGCTGGAGCGCAACGTTTACAGCAAGCACAACGCCAAGGGCATCGTGCTGATGCTGCTCATCGACCTGGCG
CTGTTCGGGCCCATCGGCCTGTCGATCTGGGCGGTGCAGATGGTGTGGATCCCGTTCTGGGCGGCCGGCGTGATCAACGG
CCTCGGCCATTACTGGGGCTACCGCAATTTCGAGAACGAGGACGCCTCCACCAACCTGGTGCCCTGGGGCATCCTGGTCG
GCGGCGAGGAGCTGCACAACAACCACCACACCTTCGGCACCTCGGCCAAGCTGTCGTACAAATGGTACGAGTTCGACATC
GGCTGGATGTACATCCGCATGCTGGAAATCTGCGGCCTGGCCAAGGTGCGCAAGGTGGCGCCGCAGCTGGCCCACGATCC
GTCCCGCCCGCAGCTGGACCTGGAACACCTTCAGGCCATCATCGCCAACCGCTACGCGATCGCCGCGCGCTACGCCCGCG
AACTGAAGGCCGAGTGCCGCGCCGAACTGGCCAAGCTCAGCCTGCCCGAGCTGCCGCAGGTTAATCTGCCGCGCAAGATG
AAGGTATGGCTGAAGCAGGACGCCAAGGACCTGCCCGAGTGCGAGCGCGACCAACTGGCCCGCATCCTGGAGCAGAGCCA
CGTGCTCGCCACCATCTACAACATGCGCCAGGAGCTGACCCGCCTGTGGGAGCGCTCCAACCTGACCCGCGAGCAACTGC
TGCATGAGCTGCAGGACTGGTGCGCGCGCGCCGAGGCATCCGGCATCGCCGCTTTGCAGCGTTTCTCGCTGAACCTGAGG
CAGACCGCCTTGGCTTGA

Upstream 100 bases:

>100_bases
GCCCTATGGTACACCAATGCACCGCCGGATGCGCTGTCAGGCTAACCGGGCGGTCAAATTTGGTTCTGCATCGCGGCAGG
GCTTGTTATAGAATAGAGCT

Downstream 100 bases:

>100_bases
TGCCGCTAAGCCATTTCGTTTCGAACCCCGCATCCGGCGATGCGGGGTTTTTTATCGTCCCACATGCCGTTAGAGTTTTT
TTCTATATTCAAATAGAAAA

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Delta-9 Acyl-Lipid Desaturase; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSLVTGRIEYMNLNWLNGLLDLPWWGNIIAALILTHITIASVTIFLHRHQAHRALDLHPIPSHFFRFWLWLTTGMVTKQW
AAIHRKHHARCETQEDPHSPQVLGIKKVLWEGAELYRAACKDQSIMDKFGHGTPDDWLERNVYSKHNAKGIVLMLLIDLA
LFGPIGLSIWAVQMVWIPFWAAGVINGLGHYWGYRNFENEDASTNLVPWGILVGGEELHNNHHTFGTSAKLSYKWYEFDI
GWMYIRMLEICGLAKVRKVAPQLAHDPSRPQLDLEHLQAIIANRYAIAARYARELKAECRAELAKLSLPELPQVNLPRKM
KVWLKQDAKDLPECERDQLARILEQSHVLATIYNMRQELTRLWERSNLTREQLLHELQDWCARAEASGIAALQRFSLNLR
QTALA

Sequences:

>Translated_405_residues
MSLVTGRIEYMNLNWLNGLLDLPWWGNIIAALILTHITIASVTIFLHRHQAHRALDLHPIPSHFFRFWLWLTTGMVTKQW
AAIHRKHHARCETQEDPHSPQVLGIKKVLWEGAELYRAACKDQSIMDKFGHGTPDDWLERNVYSKHNAKGIVLMLLIDLA
LFGPIGLSIWAVQMVWIPFWAAGVINGLGHYWGYRNFENEDASTNLVPWGILVGGEELHNNHHTFGTSAKLSYKWYEFDI
GWMYIRMLEICGLAKVRKVAPQLAHDPSRPQLDLEHLQAIIANRYAIAARYARELKAECRAELAKLSLPELPQVNLPRKM
KVWLKQDAKDLPECERDQLARILEQSHVLATIYNMRQELTRLWERSNLTREQLLHELQDWCARAEASGIAALQRFSLNLR
QTALA
>Mature_404_residues
SLVTGRIEYMNLNWLNGLLDLPWWGNIIAALILTHITIASVTIFLHRHQAHRALDLHPIPSHFFRFWLWLTTGMVTKQWA
AIHRKHHARCETQEDPHSPQVLGIKKVLWEGAELYRAACKDQSIMDKFGHGTPDDWLERNVYSKHNAKGIVLMLLIDLAL
FGPIGLSIWAVQMVWIPFWAAGVINGLGHYWGYRNFENEDASTNLVPWGILVGGEELHNNHHTFGTSAKLSYKWYEFDIG
WMYIRMLEICGLAKVRKVAPQLAHDPSRPQLDLEHLQAIIANRYAIAARYARELKAECRAELAKLSLPELPQVNLPRKMK
VWLKQDAKDLPECERDQLARILEQSHVLATIYNMRQELTRLWERSNLTREQLLHELQDWCARAEASGIAALQRFSLNLRQ
TALA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46769; Mature: 46638

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVTGRIEYMNLNWLNGLLDLPWWGNIIAALILTHITIASVTIFLHRHQAHRALDLHPI
CCCEECEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSHFFRFWLWLTTGMVTKQWAAIHRKHHARCETQEDPHSPQVLGIKKVLWEGAELYRAAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KDQSIMDKFGHGTPDDWLERNVYSKHNAKGIVLMLLIDLALFGPIGLSIWAVQMVWIPFW
CCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGVINGLGHYWGYRNFENEDASTNLVPWGILVGGEELHNNHHTFGTSAKLSYKWYEFDI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCEEEEEEEEECH
GWMYIRMLEICGLAKVRKVAPQLAHDPSRPQLDLEHLQAIIANRYAIAARYARELKAECR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELAKLSLPELPQVNLPRKMKVWLKQDAKDLPECERDQLARILEQSHVLATIYNMRQELT
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLWERSNLTREQLLHELQDWCARAEASGIAALQRFSLNLRQTALA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLVTGRIEYMNLNWLNGLLDLPWWGNIIAALILTHITIASVTIFLHRHQAHRALDLHPI
CCEECEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSHFFRFWLWLTTGMVTKQWAAIHRKHHARCETQEDPHSPQVLGIKKVLWEGAELYRAAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KDQSIMDKFGHGTPDDWLERNVYSKHNAKGIVLMLLIDLALFGPIGLSIWAVQMVWIPFW
CCHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGVINGLGHYWGYRNFENEDASTNLVPWGILVGGEELHNNHHTFGTSAKLSYKWYEFDI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCEEEEEEEEECH
GWMYIRMLEICGLAKVRKVAPQLAHDPSRPQLDLEHLQAIIANRYAIAARYARELKAECR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELAKLSLPELPQVNLPRKMKVWLKQDAKDLPECERDQLARILEQSHVLATIYNMRQELT
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLWERSNLTREQLLHELQDWCARAEASGIAALQRFSLNLRQTALA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA