| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498724
Identifier: 34498724
GI number: 34498724
Start: 3557801
End: 3558898
Strand: Direct
Name: 34498724
Synonym: CV_3269
Alternate gene names: NA
Gene position: 3557801-3558898 (Clockwise)
Preceding gene: 34498723
Following gene: 34498735
Centisome position: 74.88
GC content: 75.77
Gene sequence:
>1098_bases ATGAGCGTTAGCCGCTACCCGGTGGCGATAGCCGGCGCCGGCCCGGCCGGCAGCGCCCTCGCGCTGGCGCTGCAGGCGCA GGGCGTGGAGGCGCTGCTGCTGGACCGCCCGCTGGCCCAGCCTTTCCGCATCGGCGAATCGGCGACGCCGGATGTCGCCG GCCTGCTCGAGCGCCTGGGCGCCGGCCATGCGCTGGACGGCCAGCCGGGCTACCACGGCAACCTCTCGCTGTGGGGGAGC GAGTCGCCGCGGCTGGACCACTTCCTGTACCGCGGCCGCGGCCACGGCTGGCATCTGGATCGCGCCGGCTTCGACCATGC GTTGCGGCAGGAGGCGATGGCGCGCGGCGTGGCCGTGTTGGGCGAATCCGGCGTCGATGCCATCGCGCCGGCCGCTGGCG GCTGGCGGCTGCGAGTGCGCGGCCTCGGCGAAGTGGAGGCGCGGGTGGTGGTGGATGCCGGCGGCAGGCGCTCGCCGCTG GCCGCCAGGCTGGGCATTTCCCGATGCAGGCTGGACCGGCTGCAGGCGCTGGCGTGCCGCGTCGACGGCCCCGGACAACT GAGCGGCTACTCGCTGGTGGAGTCCGCGCCCTACGGCTGGTGGTATGCCGCGGCGCTGCCGGACGGCCGCGCGCTGGCCA CGCTGATGACGGACCAGGACCTGGCCCGGGAACTGGGGCTGGAACATCCCGCCAATTTCCTGGCTGCCTGGCGCGCCACC CGGCTGCTGTCGGAGAGGCTGCCGCCGCCGCAGCGGATCGACGCCGCGCACGCCTTCGCCGCGCACAGCGGCTGCGTCGC CCGCGCCGCCGGCCCCGGCTGGATCTGCGTCGGCGACGCGCTGATGGGCCTGGACCCGCTGACCTCGTCCGGCATCGCCT GCGCGCTCGGCGACGCGCTGGCCGCCGCGCCGGCCATCGTCGCGATGCTGGACGGCGAGCTGGCGCCGGCTCGCGCCTAC GCCAAGCGCGCCGACGACTGCTTCCGCCGCTATCTGGCGGAGCGGCGGCGGCATTACCGGCAGGAAAACCGCTGGCCGGA GCAGCCGTTCTGGCAGCGCCGCGCCTTCTCGCCCGCGGCGCTGGCCGTTCCCGCCTGA
Upstream 100 bases:
>100_bases ATGGAAAAGCAGGTGGAGGGCGAACGCCGCTTCGTCGAGGTGGCGCGCGAACTGCCCCGGCCCTTCGATCCCGCCCATCC GCCGCGGCCGGAACCGCGCA
Downstream 100 bases:
>100_bases TCCTCGTCCGGCGACGACAATGGGGCTGCCCGAAAGCAGCCCCGTTTTTCTGCCCGATCCAGGCCCTAGCGCTTGGCGGC GAAGACGGCGTCGGGAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Tryptophan Halogenase; Dehydrogenase; Oxidoreductase Protein; Dehydrogenases-Like; Alkylhalidase-Like Protein; Glucose-Inhibited Division Protein A; PimS2 Protein; FixC-Family Flavoprotein Dehydrogenase
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSVSRYPVAIAGAGPAGSALALALQAQGVEALLLDRPLAQPFRIGESATPDVAGLLERLGAGHALDGQPGYHGNLSLWGS ESPRLDHFLYRGRGHGWHLDRAGFDHALRQEAMARGVAVLGESGVDAIAPAAGGWRLRVRGLGEVEARVVVDAGGRRSPL AARLGISRCRLDRLQALACRVDGPGQLSGYSLVESAPYGWWYAAALPDGRALATLMTDQDLARELGLEHPANFLAAWRAT RLLSERLPPPQRIDAAHAFAAHSGCVARAAGPGWICVGDALMGLDPLTSSGIACALGDALAAAPAIVAMLDGELAPARAY AKRADDCFRRYLAERRRHYRQENRWPEQPFWQRRAFSPAALAVPA
Sequences:
>Translated_365_residues MSVSRYPVAIAGAGPAGSALALALQAQGVEALLLDRPLAQPFRIGESATPDVAGLLERLGAGHALDGQPGYHGNLSLWGS ESPRLDHFLYRGRGHGWHLDRAGFDHALRQEAMARGVAVLGESGVDAIAPAAGGWRLRVRGLGEVEARVVVDAGGRRSPL AARLGISRCRLDRLQALACRVDGPGQLSGYSLVESAPYGWWYAAALPDGRALATLMTDQDLARELGLEHPANFLAAWRAT RLLSERLPPPQRIDAAHAFAAHSGCVARAAGPGWICVGDALMGLDPLTSSGIACALGDALAAAPAIVAMLDGELAPARAY AKRADDCFRRYLAERRRHYRQENRWPEQPFWQRRAFSPAALAVPA >Mature_364_residues SVSRYPVAIAGAGPAGSALALALQAQGVEALLLDRPLAQPFRIGESATPDVAGLLERLGAGHALDGQPGYHGNLSLWGSE SPRLDHFLYRGRGHGWHLDRAGFDHALRQEAMARGVAVLGESGVDAIAPAAGGWRLRVRGLGEVEARVVVDAGGRRSPLA ARLGISRCRLDRLQALACRVDGPGQLSGYSLVESAPYGWWYAAALPDGRALATLMTDQDLARELGLEHPANFLAAWRATR LLSERLPPPQRIDAAHAFAAHSGCVARAAGPGWICVGDALMGLDPLTSSGIACALGDALAAAPAIVAMLDGELAPARAYA KRADDCFRRYLAERRRHYRQENRWPEQPFWQRRAFSPAALAVPA
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38868; Mature: 38736
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSRYPVAIAGAGPAGSALALALQAQGVEALLLDRPLAQPFRIGESATPDVAGLLERLG CCCCCCCEEEECCCCCCCCEEEEEHHCCCCEEECCCCCCCHHHCCCCCCCHHHHHHHHHC AGHALDGQPGYHGNLSLWGSESPRLDHFLYRGRGHGWHLDRAGFDHALRQEAMARGVAVL CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCHHHC GESGVDAIAPAAGGWRLRVRGLGEVEARVVVDAGGRRSPLAARLGISRCRLDRLQALACR CCCCCCHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC VDGPGQLSGYSLVESAPYGWWYAAALPDGRALATLMTDQDLARELGLEHPANFLAAWRAT CCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEHHCCHHHHHHCCCCCCHHHHHHHHHH RLLSERLPPPQRIDAAHAFAAHSGCVARAAGPGWICVGDALMGLDPLTSSGIACALGDAL HHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEECHHHHCCCCCCCCCCHHHHHHHH AAAPAIVAMLDGELAPARAYAKRADDCFRRYLAERRRHYRQENRWPEQPFWQRRAFSPAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCE LAVPA EECCC >Mature Secondary Structure SVSRYPVAIAGAGPAGSALALALQAQGVEALLLDRPLAQPFRIGESATPDVAGLLERLG CCCCCCEEEECCCCCCCCEEEEEHHCCCCEEECCCCCCCHHHCCCCCCCHHHHHHHHHC AGHALDGQPGYHGNLSLWGSESPRLDHFLYRGRGHGWHLDRAGFDHALRQEAMARGVAVL CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCHHHC GESGVDAIAPAAGGWRLRVRGLGEVEARVVVDAGGRRSPLAARLGISRCRLDRLQALACR CCCCCCHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC VDGPGQLSGYSLVESAPYGWWYAAALPDGRALATLMTDQDLARELGLEHPANFLAAWRAT CCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEHHCCHHHHHHCCCCCCHHHHHHHHHH RLLSERLPPPQRIDAAHAFAAHSGCVARAAGPGWICVGDALMGLDPLTSSGIACALGDAL HHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEECHHHHCCCCCCCCCCHHHHHHHH AAAPAIVAMLDGELAPARAYAKRADDCFRRYLAERRRHYRQENRWPEQPFWQRRAFSPAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCE LAVPA EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA