| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498723
Identifier: 34498723
GI number: 34498723
Start: 3555991
End: 3557811
Strand: Direct
Name: 34498723
Synonym: CV_3268
Alternate gene names: NA
Gene position: 3555991-3557811 (Clockwise)
Preceding gene: 34498722
Following gene: 34498724
Centisome position: 74.85
GC content: 67.87
Gene sequence:
>1821_bases ATGATCGAATACCGGATCTACCCCGCCATCGGCATCGCCCGCGTCGGCAACGCGCCGGAGAAGTTCTACATCGAGCCGGA CCGCTACTGCGGCCTGCCCATCATGCCGGACGGCAAACCGTTCACCCAGCAGGACTTCCGCGACGCCGAAGGCCGGCTGT GCCGGCAAGCCGCGCGCTTCAAGGTGTACAAGGTGGAAAACGGCGTCAGCGAGGAGGTGACGCTGAACACCGACGGCGTC CACGCGATACGCTGGACCGCGCACCTGGCCAACAAGAAGCCCAGCTGGTACACCTTCGTGCCGGCAGAGGGAGAAGGCGG CTACGCGCCCAACCACCCGCTGCGCAATCCGCAGGCCGAGGATCGCCACGCGCTGCTGATCGACGCCGGGCCGCGCCAGA TATCCGGCCGCAGCCAGCAGGGACAGCAGTTCAGCCGCGGCACCGTGCCGCCGGGCTACGAGGGCGCCCACTTCCCGCCC AGTCCGCTCTATCCGATGAACGACTCCATCGACACCCTGGGCGAGCTGCGCACCGACCAGGACGGCCGGCTGCTGGTGCT GGGGGGCTACGGCATATCCGGCTCCGCCGATCCGGACGCGACCATCACCGACTACGCCAACAACGACGGCTGGTGGGACG ACACCTCCGACGGACCGGTCAGCGCGGTGATCGAGTTCTCCGACGGCAGCCGGATCGAGGCGCTGCCGGCCCACGTGCTG GTGGCGCCGCCCAAGTACGCGCCGGAAGTGCCCAACCTGATCACCCTGTACGACACCATCTTCGACGCGCTGGTGCGCAG CGGCCACTACCCGGCCATTTACGAAAACGGCTTCTGGAAGTCCGGCAAGGATGGTTTCCAGCCCAATTTCCACACCGAAA TCCGCCCGCTGCTGGAGCGCGCGACCTATATGCCCTGGGTGGCCGCCATCCCCCCCAAGCCGCACCACTTCGACTTCGGC AAGCTGGGCGCCACCGGGCCCGACGGTCTGGGCGCGCCGGAGCTCCAGGGCTTCCGCCAGTACATCCTGGATTTCATCCG CCCGCCCTACCAGGAGAACGACATCCTCACCGCCAGCGGCGCGACGATGATGCCGTACCTGGCCGGCGACAATTGCCTGG TGCTCAGCACCGCCACCAGCAAGTACATGCGCCTCACCGACACCCAGTACTTCATGCTGCAGCAGTGGGTGGCCGGCTGC TTCGTCAACCGGCCGGAGGACGGCGACGCGGCCGAGAACCTGACCCGGGCGGCGCTGGACAACTGCGTCGGCGGACCGTT CTCGCCCGGCATCGAGATGACCTGGATCTCGCGCAATCCGGCCATCTACGGCCAGCCCTTCCGCATCCGCAACCACTTCG TGCCCGAAGGCCCGCTGAGCCTGGATTTCGATCTGAAGCGCGGCATGGAGCCCGGCGACGTCACCCGCTACATGGCCATC CCCTGGCAAGCCGACTTCAACGAGTGCTCGTCGCAGCCGCTGGACGGCAGGCGGCTATGGTGGTGGCCGGCGCAACGGCC GGAATTCGTCTACCTGGAGCCGCAACCGCAGCCGCGGACGCTGGCGGCCTCGCCCCCGCCGCCGCCCGACCAGGAAACCG GCAAGCAGGTGCCGTGGCTGGGCACCGACTACGACCAGTTGGCCGGCGACTTCATCCAGTTCGCCGACGACATCGACATG GTCAAGTACTGGGCCGGCCTGGGTTTCGTGATGGAAAAGCAGGTGGAGGGCGAACGCCGCTTCGTCGAGGTGGCGCGCGA ACTGCCCCGGCCCTTCGATCCCGCCCATCCGCCGCGGCCGGAACCGCGCAATGAGCGTTAG
Upstream 100 bases:
>100_bases GAACGCGGCGAGATGGTGGACGCGCTGGAGAGCGTGCGCGACAACGTCGGCCGCCTGGCGGCCGCCCATCAGACCGCACA AGCATGAATCGGGAGCCATC
Downstream 100 bases:
>100_bases CCGCTACCCGGTGGCGATAGCCGGCGCCGGCCCGGCCGGCAGCGCCCTCGCGCTGGCGCTGCAGGCGCAGGGCGTGGAGG CGCTGCTGCTGGACCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MIEYRIYPAIGIARVGNAPEKFYIEPDRYCGLPIMPDGKPFTQQDFRDAEGRLCRQAARFKVYKVENGVSEEVTLNTDGV HAIRWTAHLANKKPSWYTFVPAEGEGGYAPNHPLRNPQAEDRHALLIDAGPRQISGRSQQGQQFSRGTVPPGYEGAHFPP SPLYPMNDSIDTLGELRTDQDGRLLVLGGYGISGSADPDATITDYANNDGWWDDTSDGPVSAVIEFSDGSRIEALPAHVL VAPPKYAPEVPNLITLYDTIFDALVRSGHYPAIYENGFWKSGKDGFQPNFHTEIRPLLERATYMPWVAAIPPKPHHFDFG KLGATGPDGLGAPELQGFRQYILDFIRPPYQENDILTASGATMMPYLAGDNCLVLSTATSKYMRLTDTQYFMLQQWVAGC FVNRPEDGDAAENLTRAALDNCVGGPFSPGIEMTWISRNPAIYGQPFRIRNHFVPEGPLSLDFDLKRGMEPGDVTRYMAI PWQADFNECSSQPLDGRRLWWWPAQRPEFVYLEPQPQPRTLAASPPPPPDQETGKQVPWLGTDYDQLAGDFIQFADDIDM VKYWAGLGFVMEKQVEGERRFVEVARELPRPFDPAHPPRPEPRNER
Sequences:
>Translated_606_residues MIEYRIYPAIGIARVGNAPEKFYIEPDRYCGLPIMPDGKPFTQQDFRDAEGRLCRQAARFKVYKVENGVSEEVTLNTDGV HAIRWTAHLANKKPSWYTFVPAEGEGGYAPNHPLRNPQAEDRHALLIDAGPRQISGRSQQGQQFSRGTVPPGYEGAHFPP SPLYPMNDSIDTLGELRTDQDGRLLVLGGYGISGSADPDATITDYANNDGWWDDTSDGPVSAVIEFSDGSRIEALPAHVL VAPPKYAPEVPNLITLYDTIFDALVRSGHYPAIYENGFWKSGKDGFQPNFHTEIRPLLERATYMPWVAAIPPKPHHFDFG KLGATGPDGLGAPELQGFRQYILDFIRPPYQENDILTASGATMMPYLAGDNCLVLSTATSKYMRLTDTQYFMLQQWVAGC FVNRPEDGDAAENLTRAALDNCVGGPFSPGIEMTWISRNPAIYGQPFRIRNHFVPEGPLSLDFDLKRGMEPGDVTRYMAI PWQADFNECSSQPLDGRRLWWWPAQRPEFVYLEPQPQPRTLAASPPPPPDQETGKQVPWLGTDYDQLAGDFIQFADDIDM VKYWAGLGFVMEKQVEGERRFVEVARELPRPFDPAHPPRPEPRNER >Mature_606_residues MIEYRIYPAIGIARVGNAPEKFYIEPDRYCGLPIMPDGKPFTQQDFRDAEGRLCRQAARFKVYKVENGVSEEVTLNTDGV HAIRWTAHLANKKPSWYTFVPAEGEGGYAPNHPLRNPQAEDRHALLIDAGPRQISGRSQQGQQFSRGTVPPGYEGAHFPP SPLYPMNDSIDTLGELRTDQDGRLLVLGGYGISGSADPDATITDYANNDGWWDDTSDGPVSAVIEFSDGSRIEALPAHVL VAPPKYAPEVPNLITLYDTIFDALVRSGHYPAIYENGFWKSGKDGFQPNFHTEIRPLLERATYMPWVAAIPPKPHHFDFG KLGATGPDGLGAPELQGFRQYILDFIRPPYQENDILTASGATMMPYLAGDNCLVLSTATSKYMRLTDTQYFMLQQWVAGC FVNRPEDGDAAENLTRAALDNCVGGPFSPGIEMTWISRNPAIYGQPFRIRNHFVPEGPLSLDFDLKRGMEPGDVTRYMAI PWQADFNECSSQPLDGRRLWWWPAQRPEFVYLEPQPQPRTLAASPPPPPDQETGKQVPWLGTDYDQLAGDFIQFADDIDM VKYWAGLGFVMEKQVEGERRFVEVARELPRPFDPAHPPRPEPRNER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67934; Mature: 67934
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEYRIYPAIGIARVGNAPEKFYIEPDRYCGLPIMPDGKPFTQQDFRDAEGRLCRQAARF CCEEEEECCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHE KVYKVENGVSEEVTLNTDGVHAIRWTAHLANKKPSWYTFVPAEGEGGYAPNHPLRNPQAE EEEEECCCCCCEEEECCCCEEEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC DRHALLIDAGPRQISGRSQQGQQFSRGTVPPGYEGAHFPPSPLYPMNDSIDTLGELRTDQ CCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC DGRLLVLGGYGISGSADPDATITDYANNDGWWDDTSDGPVSAVIEFSDGSRIEALPAHVL CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEE VAPPKYAPEVPNLITLYDTIFDALVRSGHYPAIYENGFWKSGKDGFQPNFHTEIRPLLER EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHH ATYMPWVAAIPPKPHHFDFGKLGATGPDGLGAPELQGFRQYILDFIRPPYQENDILTASG HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECC ATMMPYLAGDNCLVLSTATSKYMRLTDTQYFMLQQWVAGCFVNRPEDGDAAENLTRAALD CEEEEEEECCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH NCVGGPFSPGIEMTWISRNPAIYGQPFRIRNHFVPEGPLSLDFDLKRGMEPGDVTRYMAI HHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEHHHHCCCCCCCCEEEEEE PWQADFNECSSQPLDGRRLWWWPAQRPEFVYLEPQPQPRTLAASPPPPPDQETGKQVPWL CCCCCHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCEECCCCCCCCCHHHCCCCCCC GTDYDQLAGDFIQFADDIDMVKYWAGLGFVMEKQVEGERRFVEVARELPRPFDPAHPPRP CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EPRNER CCCCCC >Mature Secondary Structure MIEYRIYPAIGIARVGNAPEKFYIEPDRYCGLPIMPDGKPFTQQDFRDAEGRLCRQAARF CCEEEEECCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHE KVYKVENGVSEEVTLNTDGVHAIRWTAHLANKKPSWYTFVPAEGEGGYAPNHPLRNPQAE EEEEECCCCCCEEEECCCCEEEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC DRHALLIDAGPRQISGRSQQGQQFSRGTVPPGYEGAHFPPSPLYPMNDSIDTLGELRTDQ CCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC DGRLLVLGGYGISGSADPDATITDYANNDGWWDDTSDGPVSAVIEFSDGSRIEALPAHVL CCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEE VAPPKYAPEVPNLITLYDTIFDALVRSGHYPAIYENGFWKSGKDGFQPNFHTEIRPLLER EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHH ATYMPWVAAIPPKPHHFDFGKLGATGPDGLGAPELQGFRQYILDFIRPPYQENDILTASG HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECC ATMMPYLAGDNCLVLSTATSKYMRLTDTQYFMLQQWVAGCFVNRPEDGDAAENLTRAALD CEEEEEEECCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH NCVGGPFSPGIEMTWISRNPAIYGQPFRIRNHFVPEGPLSLDFDLKRGMEPGDVTRYMAI HHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEHHHHCCCCCCCCEEEEEE PWQADFNECSSQPLDGRRLWWWPAQRPEFVYLEPQPQPRTLAASPPPPPDQETGKQVPWL CCCCCHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCEECCCCCCCCCHHHCCCCCCC GTDYDQLAGDFIQFADDIDMVKYWAGLGFVMEKQVEGERRFVEVARELPRPFDPAHPPRP CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EPRNER CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA