| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498716
Identifier: 34498716
GI number: 34498716
Start: 3548969
End: 3549472
Strand: Direct
Name: 34498716
Synonym: CV_3261
Alternate gene names: NA
Gene position: 3548969-3549472 (Clockwise)
Preceding gene: 34498715
Following gene: 34498717
Centisome position: 74.7
GC content: 70.63
Gene sequence:
>504_bases ATGCTGGACATCCGCCCCGCCTCCCTCGAAGACCTGGACGGCGTCGCCGCGCTGCTGCAGGCCAACGCGCCGTCCAGCGG CGGCTCGCTGACCGGTGAATTTCCAGCCGCCAAGGTCGCCGCGATGCTGCGCTCGGACTTGCCGGAGGTCGCAGCCCTGC GCGATGGCCGCATCGTCGGCGTCCTGTTCGCCTCGTCCACGACCCAACCCTCTCCGCCTCCGCCAGTGGCGGCCATGCTG CGCGCCTGGCCCGGCGAACCCGACGCCTATGTCTATGGCCCGGTCTGCGTGGCGGAATCCGAACGCGGCCAAGGCCTGCC GGCCCGGCTCTACGCCGCGCAGCGATCCCTTCTGCCCGGCAGGGAAGCCATCCTGTTCATCCGTCGCGACAACGCCGCCT CGCTGCGCGCGCACCTGCGGCTGGGCCTGCGCGAGGTGGCCGGATTCACGCTGGCGGGGGCGGCATACGCGGTGCTGAGC GGCACAGATCATTCAAAAAGTTAA
Upstream 100 bases:
>100_bases CTGCCCGGAGACTTCCCGCCGCAAACGCACAGAGAGCCGGCTTGACCGTCCGGCTCCGCCGGGCGAGGATGGGGACAGAT TACGCCCGACAAGGCCAGAC
Downstream 100 bases:
>100_bases ATATCCGCATTAGCACTTAAGTATTCGTCACGAGGCGCATGGCCGCGCTTGGCGGCTATACCTGCAAGGCGGCAAGCCGC CGCGAAGGCGGATCTGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLDIRPASLEDLDGVAALLQANAPSSGGSLTGEFPAAKVAAMLRSDLPEVAALRDGRIVGVLFASSTTQPSPPPPVAAML RAWPGEPDAYVYGPVCVAESERGQGLPARLYAAQRSLLPGREAILFIRRDNAASLRAHLRLGLREVAGFTLAGAAYAVLS GTDHSKS
Sequences:
>Translated_167_residues MLDIRPASLEDLDGVAALLQANAPSSGGSLTGEFPAAKVAAMLRSDLPEVAALRDGRIVGVLFASSTTQPSPPPPVAAML RAWPGEPDAYVYGPVCVAESERGQGLPARLYAAQRSLLPGREAILFIRRDNAASLRAHLRLGLREVAGFTLAGAAYAVLS GTDHSKS >Mature_167_residues MLDIRPASLEDLDGVAALLQANAPSSGGSLTGEFPAAKVAAMLRSDLPEVAALRDGRIVGVLFASSTTQPSPPPPVAAML RAWPGEPDAYVYGPVCVAESERGQGLPARLYAAQRSLLPGREAILFIRRDNAASLRAHLRLGLREVAGFTLAGAAYAVLS GTDHSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17388; Mature: 17388
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIRPASLEDLDGVAALLQANAPSSGGSLTGEFPAAKVAAMLRSDLPEVAALRDGRIVG CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEE VLFASSTTQPSPPPPVAAMLRAWPGEPDAYVYGPVCVAESERGQGLPARLYAAQRSLLPG EEEECCCCCCCCCCHHHHHHHCCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHCCCC REAILFIRRDNAASLRAHLRLGLREVAGFTLAGAAYAVLSGTDHSKS CEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCC >Mature Secondary Structure MLDIRPASLEDLDGVAALLQANAPSSGGSLTGEFPAAKVAAMLRSDLPEVAALRDGRIVG CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEEE VLFASSTTQPSPPPPVAAMLRAWPGEPDAYVYGPVCVAESERGQGLPARLYAAQRSLLPG EEEECCCCCCCCCCHHHHHHHCCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHCCCC REAILFIRRDNAASLRAHLRLGLREVAGFTLAGAAYAVLSGTDHSKS CEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA