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The map label for this gene is 34498684

Identifier: 34498684

GI number: 34498684

Start: 3511057

End: 3512751

Strand: Direct

Name: 34498684

Synonym: CV_3229

Alternate gene names: NA

Gene position: 3511057-3512751 (Clockwise)

Preceding gene: 34498683

Following gene: 34498685

Centisome position: 73.9

GC content: 69.09

Gene sequence:

>1695_bases
TTGTCTGATGTCGGCTGCGGCATTCAAGGGCAACAAGGCGGCGTTGCCGTCCAAGCCCTGCGCCGGCTGCGGCCGAACCA
TGAGCTGGCGCAAAAAATGGCGCGCCAGCTGGGACGCTGTCCAGTATTGCTCCGAGCGCTGCCGCCGCCGGAAAGGCAAA
GCCGCATGACCACCTTGCGGCTGATCCTGGGCGACCAGCTCAATCCCCGCCACAGCTGGTTCGCCGAGCCCGACGCCAAC
GTGGTGCATGTGATGATGGAAATCCGCCAGGAAACCGATTACGTGCGCCACCACGCGCAGAAAATCCTGGCCATCTTCGC
CGCGATGCGCGACTTCGCCGCCCAGTTGAAAGCGCAAGGCCACCGCGTGCGCTACGTGGCCATAGACGACGCCAGCAACC
GCCAGTCGCTGATCGGCAATCTGGACGCGCTGATCGCCCATTACCGCGCGGCGGCGGTGGAGTACCAGGCCCCGGACGAG
TGGCGGCTGGACCGCCAGCTCGCGGAATGGGCGGCCGGCCTGCCCATACCCTGCCGCATGGCGGACAGCGAGCACTTCTA
CACCGCGCGCGGCGAGGCGGCGGCGTTCTTCGGCGCGCGGCGGCAATGGCGGCAGGAGACCCTATACCGTCACCTGCGGC
GCCAGCACGGCATTTTGATGGACGACAACGGCGAGCCCGCCGGCGGGCGCTGGAATTTCGACGCCGACAACCGCCAGCGC
TGGCCCGGCCACCCGCCCGAACCAAACGATGCGCGTCCCGAGCATGACCACAGCCGGCTGTGGCAAACCATTGTCGACGC
CGGGGTGGACAGCTTCGGCCAGCCGCAGGCGGACGCCCTGCGCTGGCCGCTCAACCGCGCCGAGGCGCTGGCGCAGCTGC
GCGCCTTCGTCGAACACGCGCTGCCGCATTTCGGCGCCTACCAGGACGCGATGAGCCCGCGCGCGCGGCGGCTGTTCCAT
TCGCTGCTGTCCTTCGCCCTCAATGTGAAAATGCTGAATCCGCGCGAGGCGGTGGACGCCGCCGTCGCCGCCTGGCGCCG
GGGGGACGCGCCGCTGGCCGCGGTGGAAGGCTTCGCGCGGCAGCTGCTGGGCTGGCGCGAGTACGTGCGCGGCGTGTACT
GGGCCAAGATGCCCGGCTACCGCGACAGCAACGCGCTGGATCACCGGCTGCCGCTGCCGCGCTGGTTTTGGGACGGCGAC
ACCGGCATGCGCTGCCTCGCCCACGCCATCGGCCAATCGCTCGAAGACGCCTACGCCCACCACATCCAGCGGCTGATGGT
GATAGGCAATTTCGGCCTGATCGCCGGCCTGTCGCCGCAGGCGCTGCACGAATGGTATCTGGGCGTCTACATCGACGCCT
TCGAATGGGTGGAGCTGCCCAACACGCTGGGCATGAGCCAGTTCGCCGACGGCGGGCTGCTGGGCAGCAAGCCTTACGCC
GGCAGCGCCGCCTATATCGGCCGCATGGGCGATTACTGCGCCGGCTGCCGCTATCGGCCCAAGCAGCGCGTCGGCGCCGA
CGCCTGCCCGTTCAATGCCTTGTACTGGGATTTTTTCCAGCGCCACCGCGCGCGGCTGGCCGCCAATCCGCGGCTGGCGC
TGGTCTACCGCCAGCTGGACAAGCTGCCGGAAGCCGAACGCGCCGCCATCTCCGCGCGCGCCGCCGCGCTGCAAGCCGAT
CTAGACGCACTGTGA

Upstream 100 bases:

>100_bases
ATCACGCTGCACCGCGACTACTGGGATGCGGCGGAAGAACTGTTCGAGAAAATTCCGTTGTTCGGCCTGCCCGTGGCCTG
GCTGCGCAAGAAACTGAGGG

Downstream 100 bases:

>100_bases
GGTCAAGCATGCTGAGAAAACCGCTCGCGCTGTTCGCCATCGCCCTGCTGCCGCTCACCGGCTGCTCCACCGCGCCGCCG
TCCGGCATCGACCCGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MSDVGCGIQGQQGGVAVQALRRLRPNHELAQKMARQLGRCPVLLRALPPPERQSRMTTLRLILGDQLNPRHSWFAEPDAN
VVHVMMEIRQETDYVRHHAQKILAIFAAMRDFAAQLKAQGHRVRYVAIDDASNRQSLIGNLDALIAHYRAAAVEYQAPDE
WRLDRQLAEWAAGLPIPCRMADSEHFYTARGEAAAFFGARRQWRQETLYRHLRRQHGILMDDNGEPAGGRWNFDADNRQR
WPGHPPEPNDARPEHDHSRLWQTIVDAGVDSFGQPQADALRWPLNRAEALAQLRAFVEHALPHFGAYQDAMSPRARRLFH
SLLSFALNVKMLNPREAVDAAVAAWRRGDAPLAAVEGFARQLLGWREYVRGVYWAKMPGYRDSNALDHRLPLPRWFWDGD
TGMRCLAHAIGQSLEDAYAHHIQRLMVIGNFGLIAGLSPQALHEWYLGVYIDAFEWVELPNTLGMSQFADGGLLGSKPYA
GSAAYIGRMGDYCAGCRYRPKQRVGADACPFNALYWDFFQRHRARLAANPRLALVYRQLDKLPEAERAAISARAAALQAD
LDAL

Sequences:

>Translated_564_residues
MSDVGCGIQGQQGGVAVQALRRLRPNHELAQKMARQLGRCPVLLRALPPPERQSRMTTLRLILGDQLNPRHSWFAEPDAN
VVHVMMEIRQETDYVRHHAQKILAIFAAMRDFAAQLKAQGHRVRYVAIDDASNRQSLIGNLDALIAHYRAAAVEYQAPDE
WRLDRQLAEWAAGLPIPCRMADSEHFYTARGEAAAFFGARRQWRQETLYRHLRRQHGILMDDNGEPAGGRWNFDADNRQR
WPGHPPEPNDARPEHDHSRLWQTIVDAGVDSFGQPQADALRWPLNRAEALAQLRAFVEHALPHFGAYQDAMSPRARRLFH
SLLSFALNVKMLNPREAVDAAVAAWRRGDAPLAAVEGFARQLLGWREYVRGVYWAKMPGYRDSNALDHRLPLPRWFWDGD
TGMRCLAHAIGQSLEDAYAHHIQRLMVIGNFGLIAGLSPQALHEWYLGVYIDAFEWVELPNTLGMSQFADGGLLGSKPYA
GSAAYIGRMGDYCAGCRYRPKQRVGADACPFNALYWDFFQRHRARLAANPRLALVYRQLDKLPEAERAAISARAAALQAD
LDAL
>Mature_563_residues
SDVGCGIQGQQGGVAVQALRRLRPNHELAQKMARQLGRCPVLLRALPPPERQSRMTTLRLILGDQLNPRHSWFAEPDANV
VHVMMEIRQETDYVRHHAQKILAIFAAMRDFAAQLKAQGHRVRYVAIDDASNRQSLIGNLDALIAHYRAAAVEYQAPDEW
RLDRQLAEWAAGLPIPCRMADSEHFYTARGEAAAFFGARRQWRQETLYRHLRRQHGILMDDNGEPAGGRWNFDADNRQRW
PGHPPEPNDARPEHDHSRLWQTIVDAGVDSFGQPQADALRWPLNRAEALAQLRAFVEHALPHFGAYQDAMSPRARRLFHS
LLSFALNVKMLNPREAVDAAVAAWRRGDAPLAAVEGFARQLLGWREYVRGVYWAKMPGYRDSNALDHRLPLPRWFWDGDT
GMRCLAHAIGQSLEDAYAHHIQRLMVIGNFGLIAGLSPQALHEWYLGVYIDAFEWVELPNTLGMSQFADGGLLGSKPYAG
SAAYIGRMGDYCAGCRYRPKQRVGADACPFNALYWDFFQRHRARLAANPRLALVYRQLDKLPEAERAAISARAAALQADL
DAL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63741; Mature: 63610

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVGCGIQGQQGGVAVQALRRLRPNHELAQKMARQLGRCPVLLRALPPPERQSRMTTLR
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
LILGDQLNPRHSWFAEPDANVVHVMMEIRQETDYVRHHAQKILAIFAAMRDFAAQLKAQG
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HRVRYVAIDDASNRQSLIGNLDALIAHYRAAAVEYQAPDEWRLDRQLAEWAAGLPIPCRM
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEE
ADSEHFYTARGEAAAFFGARRQWRQETLYRHLRRQHGILMDDNGEPAGGRWNFDADNRQR
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
WPGHPPEPNDARPEHDHSRLWQTIVDAGVDSFGQPQADALRWPLNRAEALAQLRAFVEHA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
LPHFGAYQDAMSPRARRLFHSLLSFALNVKMLNPREAVDAAVAAWRRGDAPLAAVEGFAR
HHHCCCHHHHCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCHHHHHHHHH
QLLGWREYVRGVYWAKMPGYRDSNALDHRLPLPRWFWDGDTGMRCLAHAIGQSLEDAYAH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
HIQRLMVIGNFGLIAGLSPQALHEWYLGVYIDAFEWVELPNTLGMSQFADGGLLGSKPYA
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC
GSAAYIGRMGDYCAGCRYRPKQRVGADACPFNALYWDFFQRHRARLAANPRLALVYRQLD
CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KLPEAERAAISARAAALQADLDAL
HCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDVGCGIQGQQGGVAVQALRRLRPNHELAQKMARQLGRCPVLLRALPPPERQSRMTTLR
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
LILGDQLNPRHSWFAEPDANVVHVMMEIRQETDYVRHHAQKILAIFAAMRDFAAQLKAQG
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HRVRYVAIDDASNRQSLIGNLDALIAHYRAAAVEYQAPDEWRLDRQLAEWAAGLPIPCRM
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEE
ADSEHFYTARGEAAAFFGARRQWRQETLYRHLRRQHGILMDDNGEPAGGRWNFDADNRQR
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
WPGHPPEPNDARPEHDHSRLWQTIVDAGVDSFGQPQADALRWPLNRAEALAQLRAFVEHA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
LPHFGAYQDAMSPRARRLFHSLLSFALNVKMLNPREAVDAAVAAWRRGDAPLAAVEGFAR
HHHCCCHHHHCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCHHHHHHHHH
QLLGWREYVRGVYWAKMPGYRDSNALDHRLPLPRWFWDGDTGMRCLAHAIGQSLEDAYAH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
HIQRLMVIGNFGLIAGLSPQALHEWYLGVYIDAFEWVELPNTLGMSQFADGGLLGSKPYA
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC
GSAAYIGRMGDYCAGCRYRPKQRVGADACPFNALYWDFFQRHRARLAANPRLALVYRQLD
CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KLPEAERAAISARAAALQADLDAL
HCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA