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The map label for this gene is ybgK [H]

Identifier: 34498627

GI number: 34498627

Start: 3455118

End: 3455378

Strand: Direct

Name: ybgK [H]

Synonym: CV_3172

Alternate gene names: 34498627

Gene position: 3455118-3455378 (Clockwise)

Preceding gene: 34498625

Following gene: 34498628

Centisome position: 72.72

GC content: 69.35

Gene sequence:

>261_bases
ATGCCGTCACACGGCGCCTTGCCCGGCCTGATCCAGCTGCCTCCGGACGGCCAGCCCATCGTGCTGATGGCCGACGCCCA
GGCCACCGGCGGCTATCCGCGGCTGGGCATGGTGGCCGCGGCGGATCTATGGCAGCTGGGCCAGGCCCGGCTGGGCAGCC
AGCTGCGTTTCGTGGAGGCCAGCCGGGACGAGGCCGAACAGGCCGACCGGGAACTGCAACGCTACCTGCGGAGAATCGAG
AGGCTGTGCGATGAAAATTGA

Upstream 100 bases:

>100_bases
CCAGCGCTTGTGGGGCCATCCCTGGCAACTGACTCCGCGCAGCAACCGCATGGGCTACCGCCTGGCGGGAACGGCGCTGC
GCATGAGCGAACCCGCCGAA

Downstream 100 bases:

>100_bases
CCTCAACGCCGACCTGGGCGAAGGCTGCGGGGACGACGCCGCGCTGCTCGGCCTGGTCAGTTCCGCCAACATCGCCTGCG
GCTGGCACGCCGGCGACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MPSHGALPGLIQLPPDGQPIVLMADAQATGGYPRLGMVAAADLWQLGQARLGSQLRFVEASRDEAEQADRELQRYLRRIE
RLCDEN

Sequences:

>Translated_86_residues
MPSHGALPGLIQLPPDGQPIVLMADAQATGGYPRLGMVAAADLWQLGQARLGSQLRFVEASRDEAEQADRELQRYLRRIE
RLCDEN
>Mature_85_residues
PSHGALPGLIQLPPDGQPIVLMADAQATGGYPRLGMVAAADLWQLGQARLGSQLRFVEASRDEAEQADRELQRYLRRIER
LCDEN

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=85, Percent_Identity=50.5882352941176, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 9500; Mature: 9369

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHGALPGLIQLPPDGQPIVLMADAQATGGYPRLGMVAAADLWQLGQARLGSQLRFVEA
CCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHC
SRDEAEQADRELQRYLRRIERLCDEN
CCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSHGALPGLIQLPPDGQPIVLMADAQATGGYPRLGMVAAADLWQLGQARLGSQLRFVEA
CCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHC
SRDEAEQADRELQRYLRRIERLCDEN
CCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]