Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is yfeH [C]

Identifier: 34498600

GI number: 34498600

Start: 3427631

End: 3428602

Strand: Direct

Name: yfeH [C]

Synonym: CV_3145

Alternate gene names: 34498600

Gene position: 3427631-3428602 (Clockwise)

Preceding gene: 34498598

Following gene: 34498604

Centisome position: 72.14

GC content: 68.0

Gene sequence:

>972_bases
ATGCCCAAACTGTTGGATTCCTTCACCGCCGCGCTGCTGGCCACCGTGGCCCTGGCCAGCCTGCTGCCCTGTTACGGCCC
AGCCGCGCAGATCTTCAACCTGGCCACCAATCTGGCCATCGGCCTGCTGTTCTTCCTGCACGGCGCCAAGCTGTCGCGCG
AGGCCGTGATCGCCGGCGCCGGCCACTGGAGGCTGCACCTGACCGTGCTGGCCTGCACCTTCGCGCTGTTCCCGCTGCTG
GGCCTGCTGCTCAAACCGGCGCTGACGCCGCTGGTGACGCCGGAGCTGTACTTGGGCGTGCTCTATCTGTGCATGCTGCC
GTCCACCGTGCAGTCATCCATCGCCTTCACCTCCATGGCCCAGGGCAATGTGCCGGCCGCCATCTGCAGCGCCACCGCGT
CGAACTTGCTGGGCATCTTCATCACGCCGCTGCTGACGGGTTGGCTGGTGGCCGGCCACGCCGGCGGGGCGCAGAACATG
GGGTCGGCGCTGGACATCGTCTACCAGCTGCTGTTGCCCTTCATCGCCGGCCAGATCGCCCGCCGCTGGATAGGCGGCTG
GGTGGACAAGCACAAGGCCCTGCTGAAATACGTGGACCAGGGCTCGATCCTGATGGTGGTGTACACCGCGTTCAGCGCGG
CGGTGATCAGCGGGCTGTGGCGGCAGACGCCGCCGTCGGCGCTGGCCGGCCTGCTGGCGGTCAACGCCATCCTGTTGGGC
CTGCTGCTGGCGATCACCTCGCTGGCCGGCCGCAAGCTGGGCTTCAGCCGCGAGGACAGGATCACCATCCTGTTTTGCGG
CTCGAAGAAGAGCCTGGCCAGCGGCGTGCCGATGGCCAAGGTGCTGTTCGCCGGCCACGCCATCGGCGCCATCGTGCTGC
CCTTGATGCTGTTCCACCAGATCCAGCTGATGGTGTGCGCGATGCTGGCCCAGCGCTTCCGCCAGCGCCAGCTGGCCGAA
GCCCGCGCCTGA

Upstream 100 bases:

>100_bases
AATTCATAAAAATAAGTTATTAATTGATCAGATAAATACATTTGTATTCTGAATTGATCCGCGCTTCAATAGCGGCATCG
AACAACGAACGCCCGATGCC

Downstream 100 bases:

>100_bases
AAGAAAAATCCCCGCCGAAGCGGGGATGGTTCACCGGCAAGCCCTCAGGCCTGCCGCGCCAGCGAGGTGATGACCGGCAG
CGACTCCTTGCCGTAGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPKLLDSFTAALLATVALASLLPCYGPAAQIFNLATNLAIGLLFFLHGAKLSREAVIAGAGHWRLHLTVLACTFALFPLL
GLLLKPALTPLVTPELYLGVLYLCMLPSTVQSSIAFTSMAQGNVPAAICSATASNLLGIFITPLLTGWLVAGHAGGAQNM
GSALDIVYQLLLPFIAGQIARRWIGGWVDKHKALLKYVDQGSILMVVYTAFSAAVISGLWRQTPPSALAGLLAVNAILLG
LLLAITSLAGRKLGFSREDRITILFCGSKKSLASGVPMAKVLFAGHAIGAIVLPLMLFHQIQLMVCAMLAQRFRQRQLAE
ARA

Sequences:

>Translated_323_residues
MPKLLDSFTAALLATVALASLLPCYGPAAQIFNLATNLAIGLLFFLHGAKLSREAVIAGAGHWRLHLTVLACTFALFPLL
GLLLKPALTPLVTPELYLGVLYLCMLPSTVQSSIAFTSMAQGNVPAAICSATASNLLGIFITPLLTGWLVAGHAGGAQNM
GSALDIVYQLLLPFIAGQIARRWIGGWVDKHKALLKYVDQGSILMVVYTAFSAAVISGLWRQTPPSALAGLLAVNAILLG
LLLAITSLAGRKLGFSREDRITILFCGSKKSLASGVPMAKVLFAGHAIGAIVLPLMLFHQIQLMVCAMLAQRFRQRQLAE
ARA
>Mature_322_residues
PKLLDSFTAALLATVALASLLPCYGPAAQIFNLATNLAIGLLFFLHGAKLSREAVIAGAGHWRLHLTVLACTFALFPLLG
LLLKPALTPLVTPELYLGVLYLCMLPSTVQSSIAFTSMAQGNVPAAICSATASNLLGIFITPLLTGWLVAGHAGGAQNMG
SALDIVYQLLLPFIAGQIARRWIGGWVDKHKALLKYVDQGSILMVVYTAFSAAVISGLWRQTPPSALAGLLAVNAILLGL
LLAITSLAGRKLGFSREDRITILFCGSKKSLASGVPMAKVLFAGHAIGAIVLPLMLFHQIQLMVCAMLAQRFRQRQLAEA
RA

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfeH [H]

Homologues:

Organism=Homo sapiens, GI71725371, Length=331, Percent_Identity=27.7945619335347, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788749, Length=321, Percent_Identity=52.9595015576324, Blast_Score=314, Evalue=4e-87,
Organism=Saccharomyces cerevisiae, GI6323677, Length=338, Percent_Identity=22.4852071005917, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002657
- InterPro:   IPR016833 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 34225; Mature: 34093

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLLDSFTAALLATVALASLLPCYGPAAQIFNLATNLAIGLLFFLHGAKLSREAVIAGA
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECC
GHWRLHLTVLACTFALFPLLGLLLKPALTPLVTPELYLGVLYLCMLPSTVQSSIAFTSMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
QGNVPAAICSATASNLLGIFITPLLTGWLVAGHAGGAQNMGSALDIVYQLLLPFIAGQIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRWIGGWVDKHKALLKYVDQGSILMVVYTAFSAAVISGLWRQTPPSALAGLLAVNAILLG
HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLLAITSLAGRKLGFSREDRITILFCGSKKSLASGVPMAKVLFAGHAIGAIVLPLMLFHQ
HHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IQLMVCAMLAQRFRQRQLAEARA
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKLLDSFTAALLATVALASLLPCYGPAAQIFNLATNLAIGLLFFLHGAKLSREAVIAGA
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECC
GHWRLHLTVLACTFALFPLLGLLLKPALTPLVTPELYLGVLYLCMLPSTVQSSIAFTSMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
QGNVPAAICSATASNLLGIFITPLLTGWLVAGHAGGAQNMGSALDIVYQLLLPFIAGQIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRWIGGWVDKHKALLKYVDQGSILMVVYTAFSAAVISGLWRQTPPSALAGLLAVNAILLG
HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLLAITSLAGRKLGFSREDRITILFCGSKKSLASGVPMAKVLFAGHAIGAIVLPLMLFHQ
HHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IQLMVCAMLAQRFRQRQLAEARA
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 1849605 [H]