Click here to switch to the map view.

The map label for this gene is yccY [C]

Identifier: 34498595

GI number: 34498595

Start: 3425157

End: 3425534

Strand: Reverse

Name: yccY [C]

Synonym: CV_3140

Alternate gene names: 34498595

Gene position: 3425534-3425157 (Counterclockwise)

Preceding gene: 34498596

Following gene: 34498594

Centisome position: 72.1

GC content: 71.16

Gene sequence:

>378_bases
TTGACGGGCAGGGTCGAGATCGACTCCGCCGGCACGCACGGCTATCACGTCGGCGAGGTGCCGGACGCGCGAAGCGCGCG
CGCCGCCGCCGCTCGCGGTTACGACCTTTCCGCGCAACGGGCCAGGCAGGTGGTCGACAGCGATTTTTCCGCCTTCGATC
TGATACTCGCCGCGGACTGCCGCAACCTGGCCGATCTGCGCCGGCGCTGTCCCGAGGCGCTGGCCGGCAGGCTGCGCCTG
ATGCTGGAGCCGCTTGGCGAGGGGCGGGAGGTGCCGGATCCGTATTACGGCGGCGAGCGCGGTTTCGAACAGGTGCTCGA
TCTGCTGGAGGCCGCCTGCGACGCCTGGCTGGCGCGGATCGCGGCCGGCTTGCGTTGA

Upstream 100 bases:

>100_bases
CGAAAAGGATGTTTTCTCTATCCTTTTTGTATGTCATGGAAATATATGCAGGTCTCCGACCGCTGAAGGTGTGATGCGGG
CGAGGCTGGAGGGGGCTGGT

Downstream 100 bases:

>100_bases
GCGCCTGACCGAAAGCGGCGCTCCTGCTAAGCTATTTGAAACAACCCCGTCATGCCTGAGCGGGCCGAAGCCGACGGCTG
CGCGGGCGAACCCTGTCTGC

Product: protein-tyrosine-phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTGRVEIDSAGTHGYHVGEVPDARSARAAAARGYDLSAQRARQVVDSDFSAFDLILAADCRNLADLRRRCPEALAGRLRL
MLEPLGEGREVPDPYYGGERGFEQVLDLLEAACDAWLARIAAGLR

Sequences:

>Translated_125_residues
MTGRVEIDSAGTHGYHVGEVPDARSARAAAARGYDLSAQRARQVVDSDFSAFDLILAADCRNLADLRRRCPEALAGRLRL
MLEPLGEGREVPDPYYGGERGFEQVLDLLEAACDAWLARIAAGLR
>Mature_124_residues
TGRVEIDSAGTHGYHVGEVPDARSARAAAARGYDLSAQRARQVVDSDFSAFDLILAADCRNLADLRRRCPEALAGRLRLM
LEPLGEGREVPDPYYGGERGFEQVLDLLEAACDAWLARIAAGLR

Specific function: Unknown

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Homo sapiens, GI4757714, Length=116, Percent_Identity=33.6206896551724, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI78706766, Length=117, Percent_Identity=36.7521367521368, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI78706768, Length=117, Percent_Identity=36.7521367521368, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI78706770, Length=124, Percent_Identity=33.0645161290323, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI78706772, Length=124, Percent_Identity=33.0645161290323, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 13601; Mature: 13470

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRVEIDSAGTHGYHVGEVPDARSARAAAARGYDLSAQRARQVVDSDFSAFDLILAADC
CCCCEECCCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
RNLADLRRRCPEALAGRLRLMLEPLGEGREVPDPYYGGERGFEQVLDLLEAACDAWLARI
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAGLR
HHCCC
>Mature Secondary Structure 
TGRVEIDSAGTHGYHVGEVPDARSARAAAARGYDLSAQRARQVVDSDFSAFDLILAADC
CCCEECCCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
RNLADLRRRCPEALAGRLRLMLEPLGEGREVPDPYYGGERGFEQVLDLLEAACDAWLARI
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAGLR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]